RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 MINK1Q8N4C8 1332 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-219ENST00000580670 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
CDK5RAP3-219ENST00000580670 XRN1Q8IZH2 1706 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP3-219ENST00000580670 TULP4Q9NRJ4 1543 aa19.13■□□□□ 0.65
CDK5RAP3-219ENST00000580670 PTCH1Q13635 1447 aa19.13■□□□□ 0.65
CDK5RAP3-219ENST00000580670 CHD2O14647 1828 aaKnown RBP19.12■□□□□ 0.65
CDK5RAP3-219ENST00000580670 KCNA6P17658 529 aa19.11■□□□□ 0.65
CDK5RAP3-219ENST00000580670 STRCQ7RTU9 1775 aa19.1■□□□□ 0.65
CDK5RAP3-219ENST00000580670 PUS7Q96PZ0 661 aaKnown RBP19.09■□□□□ 0.65
CDK5RAP3-219ENST00000580670 SRPK2P78362 688 aaKnown RBP19.08■□□□□ 0.64
CDK5RAP3-219ENST00000580670 CABP2Q9NPB3 220 aa19.08■□□□□ 0.64
CDK5RAP3-219ENST00000580670 CDK19Q9BWU1 502 aa19.07■□□□□ 0.64
CDK5RAP3-219ENST00000580670 MIER1Q8N108 512 aa19.06■□□□□ 0.64
CDK5RAP3-219ENST00000580670 MYOM1P52179 1685 aa19.06■□□□□ 0.64
CDK5RAP3-219ENST00000580670 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.06■□□□□ 0.64
CDK5RAP3-219ENST00000580670 WASLO00401 505 aaPredicted RBP19.05■□□□□ 0.64
CDK5RAP3-219ENST00000580670 NWD1Q149M9 1564 aa19.05■□□□□ 0.64
CDK5RAP3-219ENST00000580670 PANK3Q9H999 370 aa19.05■□□□□ 0.64
CDK5RAP3-219ENST00000580670 ATAD2Q6PL18 1390 aa19.04■□□□□ 0.64
CDK5RAP3-219ENST00000580670 TMC1Q8TDI8 760 aa19.04■□□□□ 0.64
CDK5RAP3-219ENST00000580670 ADGRB2O60241 1585 aa19.03■□□□□ 0.64
CDK5RAP3-219ENST00000580670 ANP32CO43423 234 aa19.03■□□□□ 0.64
CDK5RAP3-219ENST00000580670 SLC12A5Q9H2X9 1139 aa19.01■□□□□ 0.63
CDK5RAP3-219ENST00000580670 NKTRP30414 1462 aaKnown RBP18.99■□□□□ 0.63
CDK5RAP3-219ENST00000580670 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
CDK5RAP3-219ENST00000580670 NINLQ9Y2I6 1382 aa18.98■□□□□ 0.63
CDK5RAP3-219ENST00000580670 PER1O15534 1290 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-219ENST00000580670 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-219ENST00000580670 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
CDK5RAP3-219ENST00000580670 STRCP1A6NGW2 1772 aa18.97■□□□□ 0.63
CDK5RAP3-219ENST00000580670 NUDT16Q96DE0 195 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP3-219ENST00000580670 NALCNQ8IZF0 1738 aa18.95■□□□□ 0.62
CDK5RAP3-219ENST00000580670 C14orf37Q86TY3 774 aa18.95■□□□□ 0.62
CDK5RAP3-219ENST00000580670 KNSTRNQ9Y448 316 aa18.95■□□□□ 0.62
CDK5RAP3-219ENST00000580670 ADGRL3Q9HAR2 1447 aa18.95■□□□□ 0.62
CDK5RAP3-219ENST00000580670 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
CDK5RAP3-219ENST00000580670 CABP1Q9NZU7 370 aa18.94■□□□□ 0.62
CDK5RAP3-219ENST00000580670 PRR36Q9H6K5 1346 aa18.94■□□□□ 0.62
CDK5RAP3-219ENST00000580670 ATP7BP35670 1465 aa18.94■□□□□ 0.62
CDK5RAP3-219ENST00000580670 ANKRD36BQ8N2N9 1353 aa18.94■□□□□ 0.62
CDK5RAP3-219ENST00000580670 CCDC61Q9Y6R9 512 aa18.93■□□□□ 0.62
CDK5RAP3-219ENST00000580670 NUTM2FA1L443 756 aa18.93■□□□□ 0.62
CDK5RAP3-219ENST00000580670 PPIP5K1Q6PFW1 1433 aa18.93■□□□□ 0.62
CDK5RAP3-219ENST00000580670 CARD14Q9BXL6 1004 aa18.93■□□□□ 0.62
CDK5RAP3-219ENST00000580670 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-219ENST00000580670 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
CDK5RAP3-219ENST00000580670 CDC42BPGQ6DT37 1551 aa18.92■□□□□ 0.62
CDK5RAP3-219ENST00000580670 ZNF335Q9H4Z2 1342 aaPredicted RBP18.91■□□□□ 0.62
CDK5RAP3-219ENST00000580670 A0A1W2PP64 1363 aa18.9■□□□□ 0.62
CDK5RAP3-219ENST00000580670 TMEM94Q12767 1356 aa18.9■□□□□ 0.62
CDK5RAP3-219ENST00000580670 NSD3Q9BZ95 1437 aa18.9■□□□□ 0.62
CDK5RAP3-219ENST00000580670 FMN2Q9NZ56 1722 aa18.9■□□□□ 0.62
CDK5RAP3-219ENST00000580670 HDGFL2Q7Z4V5 671 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-219ENST00000580670 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
CDK5RAP3-219ENST00000580670 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.62
CDK5RAP3-219ENST00000580670 USP32Q8NFA0 1604 aa18.89■□□□□ 0.61
CDK5RAP3-219ENST00000580670 TOPAZ1Q8N9V7 1692 aa18.89■□□□□ 0.61
CDK5RAP3-219ENST00000580670 AMER1Q5JTC6 1135 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP3-219ENST00000580670 CC2D1BQ5T0F9 858 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-219ENST00000580670 ANKARQ7Z5J8 1434 aa18.88■□□□□ 0.61
CDK5RAP3-219ENST00000580670 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP3-219ENST00000580670 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
CDK5RAP3-219ENST00000580670 C19orf44Q9H6X5 657 aa18.86■□□□□ 0.61
CDK5RAP3-219ENST00000580670 ITSN1Q15811 1721 aa18.86■□□□□ 0.61
CDK5RAP3-219ENST00000580670 RALBP1Q15311 655 aa18.86■□□□□ 0.61
CDK5RAP3-219ENST00000580670 RGPD8O14715 1765 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP3-219ENST00000580670 NPC1L1Q9UHC9 1359 aa18.85■□□□□ 0.61
CDK5RAP3-219ENST00000580670 PLEKHG3A1L390 1219 aa18.85■□□□□ 0.61
CDK5RAP3-219ENST00000580670 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
CDK5RAP3-219ENST00000580670 CPSF1Q10570 1443 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-219ENST00000580670 LRRC7Q96NW7 1537 aa18.84■□□□□ 0.61
CDK5RAP3-219ENST00000580670 PARD3Q8TEW0 1356 aa18.84■□□□□ 0.61
CDK5RAP3-219ENST00000580670 CGNL1Q0VF96 1302 aa18.84■□□□□ 0.61
CDK5RAP3-219ENST00000580670 CENPBP07199 599 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP3-219ENST00000580670 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
CDK5RAP3-219ENST00000580670 ACEP12821 1306 aa18.81■□□□□ 0.6
CDK5RAP3-219ENST00000580670 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
CDK5RAP3-219ENST00000580670 ATF3P18847 181 aa18.81■□□□□ 0.6
CDK5RAP3-219ENST00000580670 ZNF692Q9BU19 519 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP3-219ENST00000580670 AKAP12Q02952 1782 aa18.81■□□□□ 0.6
CDK5RAP3-219ENST00000580670 DCCP43146 1447 aa18.81■□□□□ 0.6
CDK5RAP3-219ENST00000580670 MSH6P52701 1360 aa18.8■□□□□ 0.6
CDK5RAP3-219ENST00000580670 MYBBP1AQ9BQG0 1328 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-219ENST00000580670 EDC4Q6P2E9 1401 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-219ENST00000580670 NGDNQ8NEJ9 315 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-219ENST00000580670 MON2Q7Z3U7 1717 aa18.79■□□□□ 0.6
CDK5RAP3-219ENST00000580670 POLR3AO14802 1390 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-219ENST00000580670 ESCO1Q5FWF5 840 aa18.78■□□□□ 0.6
CDK5RAP3-219ENST00000580670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDK5RAP3-219ENST00000580670 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
CDK5RAP3-219ENST00000580670 NSD2O96028 1365 aa18.78■□□□□ 0.6
CDK5RAP3-219ENST00000580670 CADPS2Q86UW7 1296 aa18.77■□□□□ 0.6
CDK5RAP3-219ENST00000580670 USP6P35125 1406 aa18.76■□□□□ 0.59
CDK5RAP3-219ENST00000580670 C1orf167Q5SNV9 1468 aa18.76■□□□□ 0.59
CDK5RAP3-219ENST00000580670 FYB1O15117 783 aa18.76■□□□□ 0.59
CDK5RAP3-219ENST00000580670 MORC1Q86VD1 984 aa18.76■□□□□ 0.59
CDK5RAP3-219ENST00000580670 MST1RQ04912 1400 aa18.75■□□□□ 0.59
CDK5RAP3-219ENST00000580670 GGNBP2Q9H3C7 697 aa18.75■□□□□ 0.59
CDK5RAP3-219ENST00000580670 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
CDK5RAP3-219ENST00000580670 CCDC184Q52MB2 194 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms