RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 LAMC1P11047 1609 aa36.45■■■■□ 3.43
CDC42EP4-205ENST00000580315 PPLO60437 1756 aa36.44■■■■□ 3.42
CDC42EP4-205ENST00000580315 ADAMTS2O95450 1211 aa36.43■■■■□ 3.42
CDC42EP4-205ENST00000580315 RBM6P78332 1123 aaKnown RBP36.42■■■■□ 3.42
CDC42EP4-205ENST00000580315 NGLY1Q96IV0 654 aa36.41■■■■□ 3.42
CDC42EP4-205ENST00000580315 ADGRF5Q8IZF2 1346 aa36.37■■■■□ 3.41
CDC42EP4-205ENST00000580315 RGS12O14924 1447 aa36.37■■■■□ 3.41
CDC42EP4-205ENST00000580315 ESCO1Q5FWF5 840 aa36.31■■■■□ 3.4
CDC42EP4-205ENST00000580315 IFT172Q9UG01 1749 aa36.3■■■■□ 3.4
CDC42EP4-205ENST00000580315 CDC42BPGQ6DT37 1551 aa36.29■■■■□ 3.4
CDC42EP4-205ENST00000580315 STK26Q9P289 416 aa36.28■■■■□ 3.4
CDC42EP4-205ENST00000580315 USP21Q9UK80 565 aa36.28■■■■□ 3.4
CDC42EP4-205ENST00000580315 NPHP3Q7Z494 1330 aa36.28■■■■□ 3.4
CDC42EP4-205ENST00000580315 WAPLQ7Z5K2 1190 aa36.26■■■■□ 3.4
CDC42EP4-205ENST00000580315 FNBP4Q8N3X1 1017 aaPredicted RBP36.26■■■■□ 3.4
CDC42EP4-205ENST00000580315 PIK3C2GO75747 1445 aa36.25■■■■□ 3.39
CDC42EP4-205ENST00000580315 TECPR2O15040 1411 aa36.25■■■■□ 3.39
CDC42EP4-205ENST00000580315 LRPPRCP42704 1394 aaKnown RBP36.24■■■■□ 3.39
CDC42EP4-205ENST00000580315 MYOM2P54296 1465 aa36.24■■■■□ 3.39
CDC42EP4-205ENST00000580315 COL22A1Q8NFW1 1626 aaPredicted RBP36.23■■■■□ 3.39
CDC42EP4-205ENST00000580315 FOXO3O43524 673 aa36.23■■■■□ 3.39
CDC42EP4-205ENST00000580315 TRPC5Q9UL62 973 aaPredicted RBP36.23■■■■□ 3.39
CDC42EP4-205ENST00000580315 TRIM26Q12899 539 aaPredicted RBP36.21■■■■□ 3.39
CDC42EP4-205ENST00000580315 TMEM132EQ6IEE7 984 aa36.21■■■■□ 3.39
CDC42EP4-205ENST00000580315 PXDNQ92626 1479 aa36.21■■■■□ 3.39
CDC42EP4-205ENST00000580315 ABCC11Q96J66 1382 aa36.21■■■■□ 3.39
CDC42EP4-205ENST00000580315 XPCQ01831 940 aaPredicted RBP36.2■■■■□ 3.39
CDC42EP4-205ENST00000580315 NUTM2FA1L443 756 aa36.19■■■■□ 3.38
CDC42EP4-205ENST00000580315 NRXN1Q9ULB1 1477 aa36.18■■■■□ 3.38
CDC42EP4-205ENST00000580315 PLEKHH1Q9ULM0 1364 aa36.16■■■■□ 3.38
CDC42EP4-205ENST00000580315 STAC3Q96MF2 364 aa36.15■■■■□ 3.38
CDC42EP4-205ENST00000580315 C14orf93Q9H972 538 aaKnown RBP36.15■■■■□ 3.38
CDC42EP4-205ENST00000580315 ATRNO75882 1429 aa36.15■■■■□ 3.38
CDC42EP4-205ENST00000580315 DCAF11Q8TEB1 546 aa36.14■■■■□ 3.38
CDC42EP4-205ENST00000580315 ATAD2Q6PL18 1390 aa36.12■■■■□ 3.37
CDC42EP4-205ENST00000580315 KDM2AQ9Y2K7 1162 aa36.11■■■■□ 3.37
CDC42EP4-205ENST00000580315 YTHDC2Q9H6S0 1430 aaKnown RBP36.1■■■■□ 3.37
CDC42EP4-205ENST00000580315 BCL9LQ86UU0 1499 aa36.1■■■■□ 3.37
CDC42EP4-205ENST00000580315 KNDC1Q76NI1 1749 aa36.09■■■■□ 3.37
CDC42EP4-205ENST00000580315 CFAP70Q5T0N1 1121 aa36.09■■■■□ 3.37
CDC42EP4-205ENST00000580315 SIRT1Q96EB6 747 aa36.06■■■■□ 3.36
CDC42EP4-205ENST00000580315 DHX57Q6P158 1386 aaKnown RBP36.05■■■■□ 3.36
CDC42EP4-205ENST00000580315 SPATA31A3Q5VYP0 1347 aa36.03■■■■□ 3.36
CDC42EP4-205ENST00000580315 FMN2Q9NZ56 1722 aa36.03■■■■□ 3.36
CDC42EP4-205ENST00000580315 MARF1Q9Y4F3 1742 aaKnown RBP36■■■■□ 3.35
CDC42EP4-205ENST00000580315 GJD4Q96KN9 370 aaPredicted RBP36■■■■□ 3.35
CDC42EP4-205ENST00000580315 KRT28Q7Z3Y7 464 aa35.99■■■■□ 3.35
CDC42EP4-205ENST00000580315 EP400Q96L91 3159 aa35.97■■■■□ 3.35
CDC42EP4-205ENST00000580315 SRCAPQ6ZRS2 3230 aa35.97■■■■□ 3.35
CDC42EP4-205ENST00000580315 KIF1AQ12756 1690 aa35.97■■■■□ 3.35
CDC42EP4-205ENST00000580315 PHF8Q9UPP1 1060 aa35.94■■■■□ 3.34
CDC42EP4-205ENST00000580315 UNC5CLQ8IV45 518 aa35.93■■■■□ 3.34
CDC42EP4-205ENST00000580315 SLIT2O94813 1529 aa35.92■■■■□ 3.34
CDC42EP4-205ENST00000580315 PRAM1Q96QH2 718 aa35.91■■■■□ 3.34
CDC42EP4-205ENST00000580315 PSME1Q06323 249 aa35.89■■■■□ 3.34
CDC42EP4-205ENST00000580315 SAFB2Q14151 953 aaKnown RBP eCLIP35.89■■■■□ 3.34
CDC42EP4-205ENST00000580315 CCDC125Q86Z20 511 aa35.88■■■■□ 3.33
CDC42EP4-205ENST00000580315 ADGRB1O14514 1584 aa35.88■■■■□ 3.33
CDC42EP4-205ENST00000580315 TNS3Q68CZ2 1445 aa35.87■■■■□ 3.33
CDC42EP4-205ENST00000580315 SIN3AQ96ST3 1273 aa35.87■■■■□ 3.33
CDC42EP4-205ENST00000580315 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.87■■■■□ 3.33
CDC42EP4-205ENST00000580315 RALGAPBQ86X10 1494 aa35.86■■■■□ 3.33
CDC42EP4-205ENST00000580315 POGKQ9P215 609 aa35.85■■■■□ 3.33
CDC42EP4-205ENST00000580315 USP32Q8NFA0 1604 aa35.85■■■■□ 3.33
CDC42EP4-205ENST00000580315 RGPD8O14715 1765 aaPredicted RBP35.84■■■■□ 3.33
CDC42EP4-205ENST00000580315 DLC1Q96QB1 1528 aa35.84■■■■□ 3.33
CDC42EP4-205ENST00000580315 HAP1P54257 671 aaPredicted RBP35.84■■■■□ 3.33
CDC42EP4-205ENST00000580315 NEUROD1Q13562 356 aa35.84■■■■□ 3.33
CDC42EP4-205ENST00000580315 CABLES1Q8TDN4 633 aa35.84■■■■□ 3.33
CDC42EP4-205ENST00000580315 SBNO1A3KN83 1393 aa35.83■■■■□ 3.33
CDC42EP4-205ENST00000580315 GLI3P10071 1580 aa35.83■■■■□ 3.33
CDC42EP4-205ENST00000580315 TRAK1Q9UPV9 953 aa35.82■■■■□ 3.32
CDC42EP4-205ENST00000580315 ZRANB1Q9UGI0 708 aa35.8■■■■□ 3.32
CDC42EP4-205ENST00000580315 PLEKHG5O94827 1062 aa35.79■■■■□ 3.32
CDC42EP4-205ENST00000580315 LMOD2Q6P5Q4 547 aa35.79■■■■□ 3.32
CDC42EP4-205ENST00000580315 L3MBTL2Q969R5 705 aa35.79■■■■□ 3.32
CDC42EP4-205ENST00000580315 ANKARQ7Z5J8 1434 aa35.77■■■■□ 3.32
CDC42EP4-205ENST00000580315 PMFBP1Q8TBY8 1022 aa35.77■■■■□ 3.32
CDC42EP4-205ENST00000580315 ARHGEF10O15013 1369 aa35.76■■■■□ 3.32
CDC42EP4-205ENST00000580315 VPS72Q15906 364 aa35.75■■■■□ 3.31
CDC42EP4-205ENST00000580315 SEPT12Q8IYM1 358 aa35.72■■■■□ 3.31
CDC42EP4-205ENST00000580315 HIRIP3Q9BW71 556 aaPredicted RBP35.71■■■■□ 3.31
CDC42EP4-205ENST00000580315 ADGRB2O60241 1585 aa35.71■■■■□ 3.31
CDC42EP4-205ENST00000580315 KIAA1210Q9ULL0 1709 aa35.7■■■■□ 3.31
CDC42EP4-205ENST00000580315 BLMP54132 1417 aaPredicted RBP35.69■■■■□ 3.3
CDC42EP4-205ENST00000580315 FAM83GA6ND36 823 aa35.69■■■■□ 3.3
CDC42EP4-205ENST00000580315 ONECUT3O60422 494 aaPredicted RBP35.68■■■■□ 3.3
CDC42EP4-205ENST00000580315 CCDC9Q9Y3X0 531 aaKnown RBP35.68■■■■□ 3.3
CDC42EP4-205ENST00000580315 MINK1Q8N4C8 1332 aaPredicted RBP35.67■■■■□ 3.3
CDC42EP4-205ENST00000580315 ABCA3Q99758 1704 aa35.66■■■■□ 3.3
CDC42EP4-205ENST00000580315 NWD2Q9ULI1 1742 aa35.66■■■■□ 3.3
CDC42EP4-205ENST00000580315 PLCH1Q4KWH8 1693 aa35.66■■■■□ 3.3
CDC42EP4-205ENST00000580315 NBPF1Q3BBV0 1214 aa35.65■■■■□ 3.3
CDC42EP4-205ENST00000580315 PRR36Q9H6K5 1346 aa35.64■■■■□ 3.3
CDC42EP4-205ENST00000580315 BRWD3Q6RI45 1802 aa35.64■■■■□ 3.3
CDC42EP4-205ENST00000580315 EIF3AQ14152 1382 aaKnown RBP35.63■■■■□ 3.29
CDC42EP4-205ENST00000580315 GPRASP1Q5JY77 1395 aa35.63■■■■□ 3.29
CDC42EP4-205ENST00000580315 WASLO00401 505 aaPredicted RBP35.61■■■■□ 3.29
CDC42EP4-205ENST00000580315 TRPM3Q9HCF6 1732 aaPredicted RBP35.6■■■■□ 3.29
CDC42EP4-205ENST00000580315 TULP4Q9NRJ4 1543 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms