RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 NPHP3Q7Z494 1330 aa19.94■□□□□ 0.78
TRAF4-214ENST00000580073 LRPPRCP42704 1394 aaKnown RBP19.94■□□□□ 0.78
TRAF4-214ENST00000580073 RBM6P78332 1123 aaKnown RBP19.93■□□□□ 0.78
TRAF4-214ENST00000580073 UPF1Q92900 1129 aaKnown RBP eCLIP19.93■□□□□ 0.78
TRAF4-214ENST00000580073 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.93■□□□□ 0.78
TRAF4-214ENST00000580073 RGS12O14924 1447 aa19.93■□□□□ 0.78
TRAF4-214ENST00000580073 SPATA31E1Q6ZUB1 1445 aa19.92■□□□□ 0.78
TRAF4-214ENST00000580073 DDX17Q92841 729 aaKnown RBP19.91■□□□□ 0.78
TRAF4-214ENST00000580073 NGLY1Q96IV0 654 aa19.91■□□□□ 0.78
TRAF4-214ENST00000580073 PIK3C2GO75747 1445 aa19.9■□□□□ 0.78
TRAF4-214ENST00000580073 PXDNQ92626 1479 aa19.89■□□□□ 0.77
TRAF4-214ENST00000580073 ORAI2Q96SN7 254 aa19.88■□□□□ 0.77
TRAF4-214ENST00000580073 QTRT2Q9H974 415 aaKnown RBP19.88■□□□□ 0.77
TRAF4-214ENST00000580073 MYOM2P54296 1465 aa19.87■□□□□ 0.77
TRAF4-214ENST00000580073 ADAMTS2O95450 1211 aa19.87■□□□□ 0.77
TRAF4-214ENST00000580073 ATAD2Q6PL18 1390 aa19.86■□□□□ 0.77
TRAF4-214ENST00000580073 RGPD8O14715 1765 aaPredicted RBP19.86■□□□□ 0.77
TRAF4-214ENST00000580073 ABCC11Q96J66 1382 aa19.85■□□□□ 0.77
TRAF4-214ENST00000580073 ADGRF5Q8IZF2 1346 aa19.85■□□□□ 0.77
TRAF4-214ENST00000580073 ESCO1Q5FWF5 840 aa19.85■□□□□ 0.77
TRAF4-214ENST00000580073 MPHOSPH9Q99550 1183 aa19.85■□□□□ 0.77
TRAF4-214ENST00000580073 TRPC5Q9UL62 973 aaPredicted RBP19.85■□□□□ 0.77
TRAF4-214ENST00000580073 USP21Q9UK80 565 aa19.84■□□□□ 0.77
TRAF4-214ENST00000580073 YTHDC2Q9H6S0 1430 aaKnown RBP19.84■□□□□ 0.77
TRAF4-214ENST00000580073 FOXD1Q16676 465 aa19.83■□□□□ 0.77
TRAF4-214ENST00000580073 RGL3Q3MIN7 710 aa19.83■□□□□ 0.77
TRAF4-214ENST00000580073 USP32Q8NFA0 1604 aa19.83■□□□□ 0.76
TRAF4-214ENST00000580073 ATRNO75882 1429 aa19.82■□□□□ 0.76
TRAF4-214ENST00000580073 ABCA3Q99758 1704 aa19.81■□□□□ 0.76
TRAF4-214ENST00000580073 NRXN1Q9ULB1 1477 aa19.8■□□□□ 0.76
TRAF4-214ENST00000580073 NWD2Q9ULI1 1742 aa19.8■□□□□ 0.76
TRAF4-214ENST00000580073 FNBP4Q8N3X1 1017 aaPredicted RBP19.8■□□□□ 0.76
TRAF4-214ENST00000580073 STK26Q9P289 416 aa19.8■□□□□ 0.76
TRAF4-214ENST00000580073 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
TRAF4-214ENST00000580073 DLC1Q96QB1 1528 aa19.78■□□□□ 0.76
TRAF4-214ENST00000580073 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
TRAF4-214ENST00000580073 SIRT1Q96EB6 747 aa19.77■□□□□ 0.76
TRAF4-214ENST00000580073 DHX57Q6P158 1386 aaKnown RBP19.77■□□□□ 0.76
TRAF4-214ENST00000580073 FOXO3O43524 673 aa19.76■□□□□ 0.75
TRAF4-214ENST00000580073 TNS3Q68CZ2 1445 aa19.75■□□□□ 0.75
TRAF4-214ENST00000580073 ITSN1Q15811 1721 aa19.74■□□□□ 0.75
TRAF4-214ENST00000580073 PLEKHH1Q9ULM0 1364 aa19.74■□□□□ 0.75
TRAF4-214ENST00000580073 WAPLQ7Z5K2 1190 aa19.74■□□□□ 0.75
TRAF4-214ENST00000580073 BCL9LQ86UU0 1499 aa19.73■□□□□ 0.75
TRAF4-214ENST00000580073 TMEM132EQ6IEE7 984 aa19.73■□□□□ 0.75
TRAF4-214ENST00000580073 EIF3AQ14152 1382 aaKnown RBP19.72■□□□□ 0.75
TRAF4-214ENST00000580073 ANKARQ7Z5J8 1434 aa19.72■□□□□ 0.75
TRAF4-214ENST00000580073 SPATA31A3Q5VYP0 1347 aa19.72■□□□□ 0.75
TRAF4-214ENST00000580073 NUTM2FA1L443 756 aa19.71■□□□□ 0.75
TRAF4-214ENST00000580073 XPCQ01831 940 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-214ENST00000580073 PSME1Q06323 249 aa19.71■□□□□ 0.75
TRAF4-214ENST00000580073 C14orf93Q9H972 538 aaKnown RBP19.71■□□□□ 0.75
TRAF4-214ENST00000580073 BRWD3Q6RI45 1802 aa19.71■□□□□ 0.75
TRAF4-214ENST00000580073 SLIT2O94813 1529 aa19.71■□□□□ 0.75
TRAF4-214ENST00000580073 ARHGEF10O15013 1369 aa19.7■□□□□ 0.74
TRAF4-214ENST00000580073 HAP1P54257 671 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-214ENST00000580073 CCDC125Q86Z20 511 aa19.69■□□□□ 0.74
TRAF4-214ENST00000580073 GLI3P10071 1580 aa19.69■□□□□ 0.74
TRAF4-214ENST00000580073 SBNO1A3KN83 1393 aa19.69■□□□□ 0.74
TRAF4-214ENST00000580073 TRPM3Q9HCF6 1732 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-214ENST00000580073 PHF8Q9UPP1 1060 aa19.68■□□□□ 0.74
TRAF4-214ENST00000580073 ADGRB1O14514 1584 aa19.67■□□□□ 0.74
TRAF4-214ENST00000580073 GJD4Q96KN9 370 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-214ENST00000580073 RAB3GAP2Q9H2M9 1393 aa19.67■□□□□ 0.74
TRAF4-214ENST00000580073 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
TRAF4-214ENST00000580073 ALS2Q96Q42 1657 aa19.66■□□□□ 0.74
TRAF4-214ENST00000580073 ARHGEF28Q8N1W1 1705 aaKnown RBP19.66■□□□□ 0.74
TRAF4-214ENST00000580073 KRT28Q7Z3Y7 464 aa19.66■□□□□ 0.74
TRAF4-214ENST00000580073 UNC5CLQ8IV45 518 aa19.66■□□□□ 0.74
TRAF4-214ENST00000580073 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
TRAF4-214ENST00000580073 NRAPQ86VF7 1730 aa19.65■□□□□ 0.74
TRAF4-214ENST00000580073 POGKQ9P215 609 aa19.65■□□□□ 0.74
TRAF4-214ENST00000580073 EP400Q96L91 3159 aa19.65■□□□□ 0.74
TRAF4-214ENST00000580073 CFAP70Q5T0N1 1121 aa19.64■□□□□ 0.73
TRAF4-214ENST00000580073 PRAM1Q96QH2 718 aa19.64■□□□□ 0.73
TRAF4-214ENST00000580073 COL14A1Q05707 1796 aaKnown RBP19.64■□□□□ 0.73
TRAF4-214ENST00000580073 STAC3Q96MF2 364 aa19.63■□□□□ 0.73
TRAF4-214ENST00000580073 KIAA1210Q9ULL0 1709 aa19.61■□□□□ 0.73
TRAF4-214ENST00000580073 CRYBG1Q9Y4K1 1723 aa19.61■□□□□ 0.73
TRAF4-214ENST00000580073 BLMP54132 1417 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-214ENST00000580073 GPRASP1Q5JY77 1395 aa19.6■□□□□ 0.73
TRAF4-214ENST00000580073 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
TRAF4-214ENST00000580073 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
TRAF4-214ENST00000580073 LMOD2Q6P5Q4 547 aa19.58■□□□□ 0.72
TRAF4-214ENST00000580073 RGPD1P0DJD0 1748 aa19.57■□□□□ 0.72
TRAF4-214ENST00000580073 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
TRAF4-214ENST00000580073 VPS72Q15906 364 aa19.56■□□□□ 0.72
TRAF4-214ENST00000580073 TOPAZ1Q8N9V7 1692 aa19.56■□□□□ 0.72
TRAF4-214ENST00000580073 CCDC9Q9Y3X0 531 aaKnown RBP19.55■□□□□ 0.72
TRAF4-214ENST00000580073 PHRF1Q9P1Y6 1649 aaKnown RBP19.54■□□□□ 0.72
TRAF4-214ENST00000580073 ATP7BP35670 1465 aa19.54■□□□□ 0.72
TRAF4-214ENST00000580073 TRAK1Q9UPV9 953 aa19.53■□□□□ 0.72
TRAF4-214ENST00000580073 PMFBP1Q8TBY8 1022 aa19.52■□□□□ 0.72
TRAF4-214ENST00000580073 MINK1Q8N4C8 1332 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-214ENST00000580073 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
TRAF4-214ENST00000580073 HRCP23327 699 aa19.5■□□□□ 0.71
TRAF4-214ENST00000580073 SEPT12Q8IYM1 358 aa19.5■□□□□ 0.71
TRAF4-214ENST00000580073 CABLES1Q8TDN4 633 aa19.5■□□□□ 0.71
TRAF4-214ENST00000580073 WASLO00401 505 aaPredicted RBP19.49■□□□□ 0.71
TRAF4-214ENST00000580073 LRP5O75197 1615 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms