RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 NPHP4O75161 1426 aaPredicted RBP8.87□□□□□ -0.99
RTTN-204ENST00000579986 CCER2I3L3R5 266 aa8.87□□□□□ -0.99
RTTN-204ENST00000579986 ROBO2Q9HCK4 1378 aa8.87□□□□□ -0.99
RTTN-204ENST00000579986 TRAK1Q9UPV9 953 aa8.86□□□□□ -0.99
RTTN-204ENST00000579986 AKAP12Q02952 1782 aa8.86□□□□□ -0.99
RTTN-204ENST00000579986 PLEKHH1Q9ULM0 1364 aa8.85□□□□□ -0.99
RTTN-204ENST00000579986 FMN2Q9NZ56 1722 aa8.85□□□□□ -0.99
RTTN-204ENST00000579986 ANKRD26Q9UPS8 1709 aa8.85□□□□□ -0.99
RTTN-204ENST00000579986 ANKLE2Q86XL3 938 aa8.85□□□□□ -0.99
RTTN-204ENST00000579986 NALCNQ8IZF0 1738 aa8.85□□□□□ -0.99
RTTN-204ENST00000579986 PARD3Q8TEW0 1356 aa8.85□□□□□ -0.99
RTTN-204ENST00000579986 CDC42BPGQ6DT37 1551 aa8.85□□□□□ -0.99
RTTN-204ENST00000579986 MON2Q7Z3U7 1717 aa8.85□□□□□ -0.99
RTTN-204ENST00000579986 NRKQ7Z2Y5 1582 aa8.84□□□□□ -0.99
RTTN-204ENST00000579986 STRCP1A6NGW2 1772 aa8.84□□□□□ -0.99
RTTN-204ENST00000579986 ATP7BP35670 1465 aa8.84□□□□□ -0.99
RTTN-204ENST00000579986 EVC2Q86UK5 1308 aa8.84□□□□□ -0.99
RTTN-204ENST00000579986 PRAM1Q96QH2 718 aa8.84□□□□□ -0.99
RTTN-204ENST00000579986 ITSN1Q15811 1721 aa8.84□□□□□ -0.99
RTTN-204ENST00000579986 NKTRP30414 1462 aaKnown RBP8.84□□□□□ -0.99
RTTN-204ENST00000579986 PRKRIP1Q9H875 184 aaPredicted RBP8.83□□□□□ -1
RTTN-204ENST00000579986 ATAD2Q6PL18 1390 aa8.83□□□□□ -1
RTTN-204ENST00000579986 USP54Q70EL1 1684 aa8.83□□□□□ -1
RTTN-204ENST00000579986 ANKRD36BQ8N2N9 1353 aa8.82□□□□□ -1
RTTN-204ENST00000579986 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
RTTN-204ENST00000579986 NCOA3Q9Y6Q9 1424 aa8.82□□□□□ -1
RTTN-204ENST00000579986 AMER1Q5JTC6 1135 aaPredicted RBP8.81□□□□□ -1
RTTN-204ENST00000579986 ANKARQ7Z5J8 1434 aa8.81□□□□□ -1
RTTN-204ENST00000579986 KIF20BQ96Q89 1820 aa8.81□□□□□ -1
RTTN-204ENST00000579986 ANP32CO43423 234 aa8.81□□□□□ -1
RTTN-204ENST00000579986 PANK3Q9H999 370 aa8.81□□□□□ -1
RTTN-204ENST00000579986 XIRP1Q702N8 1843 aaKnown RBP8.8□□□□□ -1
RTTN-204ENST00000579986 CARD14Q9BXL6 1004 aa8.8□□□□□ -1
RTTN-204ENST00000579986 AMOTL2Q9Y2J4 779 aa8.8□□□□□ -1
RTTN-204ENST00000579986 WASLO00401 505 aaPredicted RBP8.79□□□□□ -1
RTTN-204ENST00000579986 RALBP1Q15311 655 aa8.79□□□□□ -1
RTTN-204ENST00000579986 WAPLQ7Z5K2 1190 aa8.79□□□□□ -1
RTTN-204ENST00000579986 STK26Q9P289 416 aa8.79□□□□□ -1
RTTN-204ENST00000579986 NSD2O96028 1365 aa8.79□□□□□ -1
RTTN-204ENST00000579986 INSRP06213 1382 aa8.79□□□□□ -1
RTTN-204ENST00000579986 SLC26A8Q96RN1 970 aa8.79□□□□□ -1
RTTN-204ENST00000579986 CDK19Q9BWU1 502 aa8.79□□□□□ -1
RTTN-204ENST00000579986 KCNA6P17658 529 aa8.78□□□□□ -1
RTTN-204ENST00000579986 ADGRL3Q9HAR2 1447 aa8.78□□□□□ -1
RTTN-204ENST00000579986 LRRC7Q96NW7 1537 aa8.78□□□□□ -1
RTTN-204ENST00000579986 POGKQ9P215 609 aa8.78□□□□□ -1
RTTN-204ENST00000579986 SSH2Q76I76 1423 aa8.78□□□□□ -1
RTTN-204ENST00000579986 A0A1W2PP64 1363 aa8.77□□□□□ -1
RTTN-204ENST00000579986 NCKAP5LQ9HCH0 1330 aa8.77□□□□□ -1
RTTN-204ENST00000579986 RGPD8O14715 1765 aaPredicted RBP8.77□□□□□ -1.01
RTTN-204ENST00000579986 POLR3AO14802 1390 aaPredicted RBP8.77□□□□□ -1.01
RTTN-204ENST00000579986 BRD4O60885 1362 aaPredicted RBP8.77□□□□□ -1.01
RTTN-204ENST00000579986 DCCP43146 1447 aa8.77□□□□□ -1.01
RTTN-204ENST00000579986 MARF1Q9Y4F3 1742 aaKnown RBP8.77□□□□□ -1.01
RTTN-204ENST00000579986 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
RTTN-204ENST00000579986 MYBBP1AQ9BQG0 1328 aaKnown RBP8.76□□□□□ -1.01
RTTN-204ENST00000579986 PRR36Q9H6K5 1346 aa8.76□□□□□ -1.01
RTTN-204ENST00000579986 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
RTTN-204ENST00000579986 CABP2Q9NPB3 220 aa8.76□□□□□ -1.01
RTTN-204ENST00000579986 PPIP5K1Q6PFW1 1433 aa8.76□□□□□ -1.01
RTTN-204ENST00000579986 NSD3Q9BZ95 1437 aa8.76□□□□□ -1.01
RTTN-204ENST00000579986 SLC12A5Q9H2X9 1139 aa8.75□□□□□ -1.01
RTTN-204ENST00000579986 PLPPR3Q6T4P5 718 aa8.75□□□□□ -1.01
RTTN-204ENST00000579986 MST1RQ04912 1400 aa8.75□□□□□ -1.01
RTTN-204ENST00000579986 EDC4Q6P2E9 1401 aaKnown RBP8.75□□□□□ -1.01
RTTN-204ENST00000579986 KIF1AQ12756 1690 aa8.75□□□□□ -1.01
RTTN-204ENST00000579986 SHPRHQ149N8 1683 aa8.74□□□□□ -1.01
RTTN-204ENST00000579986 SMG6Q86US8 1419 aaKnown RBP8.73□□□□□ -1.01
RTTN-204ENST00000579986 NUDT16Q96DE0 195 aaKnown RBP8.73□□□□□ -1.01
RTTN-204ENST00000579986 KNSTRNQ9Y448 316 aa8.73□□□□□ -1.01
RTTN-204ENST00000579986 CCDC61Q9Y6R9 512 aa8.73□□□□□ -1.01
RTTN-204ENST00000579986 TRPM3Q9HCF6 1732 aaPredicted RBP8.73□□□□□ -1.01
RTTN-204ENST00000579986 CGNL1Q0VF96 1302 aa8.72□□□□□ -1.01
RTTN-204ENST00000579986 SCAF1Q9H7N4 1312 aaKnown RBP8.72□□□□□ -1.01
RTTN-204ENST00000579986 SRPK2P78362 688 aaKnown RBP8.72□□□□□ -1.01
RTTN-204ENST00000579986 CCDC184Q52MB2 194 aa8.72□□□□□ -1.01
RTTN-204ENST00000579986 BCANQ96GW7 911 aa8.72□□□□□ -1.01
RTTN-204ENST00000579986 USP6P35125 1406 aa8.72□□□□□ -1.01
RTTN-204ENST00000579986 SAFB2Q14151 953 aaKnown RBP eCLIP8.72□□□□□ -1.01
RTTN-204ENST00000579986 TERF2IPQ9NYB0 399 aa8.72□□□□□ -1.01
RTTN-204ENST00000579986 PIK3C2AO00443 1686 aa8.71□□□□□ -1.01
RTTN-204ENST00000579986 NLRP13Q86W25 1043 aa8.71□□□□□ -1.01
RTTN-204ENST00000579986 CABP1Q9NZU7 370 aa8.71□□□□□ -1.01
RTTN-204ENST00000579986 COL3A1P02461 1466 aaPredicted RBP8.71□□□□□ -1.02
RTTN-204ENST00000579986 PNISRQ8TF01 805 aaKnown RBP8.7□□□□□ -1.02
RTTN-204ENST00000579986 POLR3GLQ9BT43 218 aa8.7□□□□□ -1.02
RTTN-204ENST00000579986 ZNF692Q9BU19 519 aaPredicted RBP8.7□□□□□ -1.02
RTTN-204ENST00000579986 SENP3Q9H4L4 574 aaPredicted RBP8.7□□□□□ -1.02
RTTN-204ENST00000579986 USP31Q70CQ4 1352 aa8.7□□□□□ -1.02
RTTN-204ENST00000579986 OVOS2A0A0J9YW53 1432 aa8.7□□□□□ -1.02
RTTN-204ENST00000579986 BLMP54132 1417 aaPredicted RBP8.7□□□□□ -1.02
RTTN-204ENST00000579986 OVOS2Q6IE36 1432 aa8.7□□□□□ -1.02
RTTN-204ENST00000579986 PHRF1Q9P1Y6 1649 aaKnown RBP8.7□□□□□ -1.02
RTTN-204ENST00000579986 PPP2R1AP30153 589 aa8.7□□□□□ -1.02
RTTN-204ENST00000579986 AATKQ6ZMQ8 1374 aa8.69□□□□□ -1.02
RTTN-204ENST00000579986 LTBP4Q8N2S1 1624 aa8.69□□□□□ -1.02
RTTN-204ENST00000579986 PNPLA6Q8IY17 1366 aa8.69□□□□□ -1.02
RTTN-204ENST00000579986 FYB1O15117 783 aa8.69□□□□□ -1.02
RTTN-204ENST00000579986 ALS2Q96Q42 1657 aa8.68□□□□□ -1.02
RTTN-204ENST00000579986 HSPA2P54652 639 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms