RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 SENP2Q9HC62 589 aa9.73□□□□□ -0.85
LINC00271-206ENST00000579944 SEMA3EO15041 775 aa9.72□□□□□ -0.85
LINC00271-206ENST00000579944 SLC24A1O60721 1099 aa9.71□□□□□ -0.86
LINC00271-206ENST00000579944 FECHP22830 423 aa9.71□□□□□ -0.86
LINC00271-206ENST00000579944 GCGRP47871 477 aa9.71□□□□□ -0.86
LINC00271-206ENST00000579944 TRIM32Q13049 653 aa9.71□□□□□ -0.86
LINC00271-206ENST00000579944 J3QL48 77 aa9.7□□□□□ -0.86
LINC00271-206ENST00000579944 RNF19BQ6ZMZ0 732 aa9.7□□□□□ -0.86
LINC00271-206ENST00000579944 SULF1Q8IWU6 871 aa9.7□□□□□ -0.86
LINC00271-206ENST00000579944 MRGPRX2Q96LB1 330 aa9.7□□□□□ -0.86
LINC00271-206ENST00000579944 TSHZ2Q9NRE2 1034 aa9.7□□□□□ -0.86
LINC00271-206ENST00000579944 P3H3Q8IVL6 736 aa9.69□□□□□ -0.86
LINC00271-206ENST00000579944 NLRP7Q8WX94 980 aa9.69□□□□□ -0.86
LINC00271-206ENST00000579944 KIFC2Q96AC6 838 aa9.68□□□□□ -0.86
LINC00271-206ENST00000579944 GNPATO15228 680 aa9.67□□□□□ -0.86
LINC00271-206ENST00000579944 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
LINC00271-206ENST00000579944 REPIN1Q9BWE0 567 aaKnown RBP9.67□□□□□ -0.86
LINC00271-206ENST00000579944 HPS1Q92902 700 aa9.66□□□□□ -0.86
LINC00271-206ENST00000579944 RBM26Q5T8P6 1007 aaKnown RBP9.65□□□□□ -0.86
LINC00271-206ENST00000579944 MMP16P51512 607 aa9.64□□□□□ -0.87
LINC00271-206ENST00000579944 Q3C1V9 767 aa9.64□□□□□ -0.87
LINC00271-206ENST00000579944 FAM181BA6NEQ2 426 aa9.63□□□□□ -0.87
LINC00271-206ENST00000579944 SLC16A10Q8TF71 515 aa9.63□□□□□ -0.87
LINC00271-206ENST00000579944 GPR37O15354 613 aa9.6□□□□□ -0.87
LINC00271-206ENST00000579944 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
LINC00271-206ENST00000579944 DXOO77932 396 aaKnown RBP9.59□□□□□ -0.87
LINC00271-206ENST00000579944 RC3H1Q5TC82 1133 aaKnown RBP9.59□□□□□ -0.87
LINC00271-206ENST00000579944 SMYD5Q6GMV2 418 aa9.59□□□□□ -0.87
LINC00271-206ENST00000579944 CCDC24Q8N4L8 307 aa9.59□□□□□ -0.87
LINC00271-206ENST00000579944 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
LINC00271-206ENST00000579944 NXF1Q9UBU9 619 aaKnown RBP9.59□□□□□ -0.87
LINC00271-206ENST00000579944 TESPA1A2RU30 521 aaPredicted RBP9.57□□□□□ -0.88
LINC00271-206ENST00000579944 WNT7BP56706 349 aa9.57□□□□□ -0.88
LINC00271-206ENST00000579944 SKOR1P84550 965 aa9.57□□□□□ -0.88
LINC00271-206ENST00000579944 ALDH1A1P00352 501 aa9.56□□□□□ -0.88
LINC00271-206ENST00000579944 GMPRP36959 345 aa9.56□□□□□ -0.88
LINC00271-206ENST00000579944 ZSCAN1Q8NBB4 408 aa9.55□□□□□ -0.88
LINC00271-206ENST00000579944 IRF7Q92985 503 aa9.55□□□□□ -0.88
LINC00271-206ENST00000579944 CD46P15529 392 aa9.53□□□□□ -0.88
LINC00271-206ENST00000579944 NPAS3Q8IXF0 933 aa9.53□□□□□ -0.88
LINC00271-206ENST00000579944 KDM4AO75164 1064 aa9.52□□□□□ -0.89
LINC00271-206ENST00000579944 BMP1P13497 986 aa9.52□□□□□ -0.89
LINC00271-206ENST00000579944 LORP23490 312 aaPredicted RBP9.51□□□□□ -0.89
LINC00271-206ENST00000579944 CAPN5O15484 640 aaPredicted RBP9.5□□□□□ -0.89
LINC00271-206ENST00000579944 VEGFBP49765 207 aa9.5□□□□□ -0.89
LINC00271-206ENST00000579944 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
LINC00271-206ENST00000579944 HLA-CQ95604 372 aa9.5□□□□□ -0.89
LINC00271-206ENST00000579944 EHBP1Q8NDI1 1231 aa9.49□□□□□ -0.89
LINC00271-206ENST00000579944 WASF2Q9Y6W5 498 aa9.49□□□□□ -0.89
LINC00271-206ENST00000579944 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
LINC00271-206ENST00000579944 H3BM21 787 aa9.48□□□□□ -0.89
LINC00271-206ENST00000579944 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
LINC00271-206ENST00000579944 JUNDP17535 347 aa9.47□□□□□ -0.89
LINC00271-206ENST00000579944 USP46P62068 366 aa9.47□□□□□ -0.89
LINC00271-206ENST00000579944 SIAH2O43255 324 aa9.46□□□□□ -0.9
LINC00271-206ENST00000579944 GPIHBP1Q8IV16 184 aa9.46□□□□□ -0.9
LINC00271-206ENST00000579944 HOXA2O43364 376 aa9.45□□□□□ -0.9
LINC00271-206ENST00000579944 ERBB4Q15303 1308 aa9.45□□□□□ -0.9
LINC00271-206ENST00000579944 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
LINC00271-206ENST00000579944 PTCRAQ6ISU1 281 aaPredicted RBP9.43□□□□□ -0.9
LINC00271-206ENST00000579944 GUCA2AQ02747 115 aa9.42□□□□□ -0.9
LINC00271-206ENST00000579944 ZFP42Q96MM3 310 aa9.42□□□□□ -0.9
LINC00271-206ENST00000579944 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
LINC00271-206ENST00000579944 SH3BP2P78314 561 aa9.39□□□□□ -0.91
LINC00271-206ENST00000579944 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
LINC00271-206ENST00000579944 MAP2K5Q13163 448 aa9.38□□□□□ -0.91
LINC00271-206ENST00000579944 RETREG3Q86VR2 466 aa9.38□□□□□ -0.91
LINC00271-206ENST00000579944 TLL2Q9Y6L7 1015 aa9.37□□□□□ -0.91
LINC00271-206ENST00000579944 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
LINC00271-206ENST00000579944 CCNYL3P0C7X3 344 aa9.35□□□□□ -0.91
LINC00271-206ENST00000579944 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
LINC00271-206ENST00000579944 MS4A1P11836 297 aa9.34□□□□□ -0.91
LINC00271-206ENST00000579944 SCARF1Q14162 830 aa9.34□□□□□ -0.91
LINC00271-206ENST00000579944 SUZ12Q15022 739 aaKnown RBP9.34□□□□□ -0.91
LINC00271-206ENST00000579944 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
LINC00271-206ENST00000579944 IRF6O14896 467 aa9.33□□□□□ -0.92
LINC00271-206ENST00000579944 NNTQ13423 1086 aa9.33□□□□□ -0.92
LINC00271-206ENST00000579944 LINC01559Q495D7 138 aa9.33□□□□□ -0.92
LINC00271-206ENST00000579944 NUTM1Q86Y26 1132 aa9.33□□□□□ -0.92
LINC00271-206ENST00000579944 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
LINC00271-206ENST00000579944 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
LINC00271-206ENST00000579944 VSIG8P0DPA2 414 aa9.32□□□□□ -0.92
LINC00271-206ENST00000579944 SOBPA7XYQ1 873 aa9.31□□□□□ -0.92
LINC00271-206ENST00000579944 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
LINC00271-206ENST00000579944 FDX1P10109 184 aa9.3□□□□□ -0.92
LINC00271-206ENST00000579944 TIMP2P16035 220 aa9.3□□□□□ -0.92
LINC00271-206ENST00000579944 VARSP26640 1264 aaKnown RBP9.3□□□□□ -0.92
LINC00271-206ENST00000579944 PTPRNQ16849 979 aa9.3□□□□□ -0.92
LINC00271-206ENST00000579944 BAP1Q92560 729 aa9.3□□□□□ -0.92
LINC00271-206ENST00000579944 GPCPD1Q9NPB8 672 aa9.3□□□□□ -0.92
LINC00271-206ENST00000579944 ADH1CP00326 375 aa9.29□□□□□ -0.92
LINC00271-206ENST00000579944 WDR4P57081 412 aaKnown RBP9.29□□□□□ -0.92
LINC00271-206ENST00000579944 MPNDQ8N594 471 aa9.29□□□□□ -0.92
LINC00271-206ENST00000579944 ZNF511Q8NB15 262 aa9.29□□□□□ -0.92
LINC00271-206ENST00000579944 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
LINC00271-206ENST00000579944 EVA1BQ9NVM1 165 aa9.29□□□□□ -0.92
LINC00271-206ENST00000579944 CLCN1P35523 988 aa9.28□□□□□ -0.92
LINC00271-206ENST00000579944 KCNMA1Q12791 1236 aa9.28□□□□□ -0.92
LINC00271-206ENST00000579944 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
LINC00271-206ENST00000579944 MINK1Q8N4C8 1332 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms