RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 LRP6O75581 1613 aa34.79■■■■□ 3.16
CDKN2A-214ENST00000579755 ESCO1Q5FWF5 840 aa34.78■■■■□ 3.16
CDKN2A-214ENST00000579755 CFAP70Q5T0N1 1121 aa34.78■■■■□ 3.16
CDKN2A-214ENST00000579755 ZNF772Q68DY9 489 aaPredicted RBP34.78■■■■□ 3.16
CDKN2A-214ENST00000579755 TECPR2O15040 1411 aa34.78■■■■□ 3.16
CDKN2A-214ENST00000579755 DHX57Q6P158 1386 aaKnown RBP34.77■■■■□ 3.16
CDKN2A-214ENST00000579755 YTHDC2Q9H6S0 1430 aaKnown RBP34.77■■■■□ 3.16
CDKN2A-214ENST00000579755 MYOM2P54296 1465 aa34.76■■■■□ 3.15
CDKN2A-214ENST00000579755 TRIM26Q12899 539 aaPredicted RBP34.73■■■■□ 3.15
CDKN2A-214ENST00000579755 KDM2AQ9Y2K7 1162 aa34.73■■■■□ 3.15
CDKN2A-214ENST00000579755 NUTM2FA1L443 756 aa34.72■■■■□ 3.15
CDKN2A-214ENST00000579755 SIRT1Q96EB6 747 aa34.72■■■■□ 3.15
CDKN2A-214ENST00000579755 NRXN1Q9ULB1 1477 aa34.71■■■■□ 3.15
CDKN2A-214ENST00000579755 CDC42BPGQ6DT37 1551 aa34.71■■■■□ 3.15
CDKN2A-214ENST00000579755 KNDC1Q76NI1 1749 aa34.71■■■■□ 3.15
CDKN2A-214ENST00000579755 PLEKHH1Q9ULM0 1364 aa34.71■■■■□ 3.15
CDKN2A-214ENST00000579755 DCAF11Q8TEB1 546 aa34.7■■■■□ 3.15
CDKN2A-214ENST00000579755 LAMC1P11047 1609 aa34.7■■■■□ 3.14
CDKN2A-214ENST00000579755 SOS2Q07890 1332 aaPredicted RBP34.69■■■■□ 3.14
CDKN2A-214ENST00000579755 PNPLA6Q8IY17 1366 aa34.69■■■■□ 3.14
CDKN2A-214ENST00000579755 NPHP3Q7Z494 1330 aa34.67■■■■□ 3.14
CDKN2A-214ENST00000579755 STAC3Q96MF2 364 aa34.65■■■■□ 3.14
CDKN2A-214ENST00000579755 POGKQ9P215 609 aa34.64■■■■□ 3.14
CDKN2A-214ENST00000579755 FOXO3O43524 673 aa34.63■■■■□ 3.13
CDKN2A-214ENST00000579755 C8orf37Q96NL8 207 aa34.63■■■■□ 3.13
CDKN2A-214ENST00000579755 SAFB2Q14151 953 aaKnown RBP eCLIP34.62■■■■□ 3.13
CDKN2A-214ENST00000579755 PRAM1Q96QH2 718 aa34.62■■■■□ 3.13
CDKN2A-214ENST00000579755 AFF2P51816 1311 aa34.61■■■■□ 3.13
CDKN2A-214ENST00000579755 ADAMTS2O95450 1211 aa34.6■■■■□ 3.13
CDKN2A-214ENST00000579755 RXRBP28702 533 aa34.58■■■■□ 3.13
CDKN2A-214ENST00000579755 XPCQ01831 940 aaPredicted RBP34.57■■■■□ 3.12
CDKN2A-214ENST00000579755 NGLY1Q96IV0 654 aa34.57■■■■□ 3.12
CDKN2A-214ENST00000579755 TRAK1Q9UPV9 953 aa34.56■■■■□ 3.12
CDKN2A-214ENST00000579755 FMN2Q9NZ56 1722 aa34.53■■■■□ 3.12
CDKN2A-214ENST00000579755 DLC1Q96QB1 1528 aa34.5■■■■□ 3.11
CDKN2A-214ENST00000579755 QTRT2Q9H974 415 aaKnown RBP34.49■■■■□ 3.11
CDKN2A-214ENST00000579755 PXDNQ92626 1479 aa34.48■■■■□ 3.11
CDKN2A-214ENST00000579755 PHF8Q9UPP1 1060 aa34.48■■■■□ 3.11
CDKN2A-214ENST00000579755 ADGRB1O14514 1584 aa34.46■■■■□ 3.11
CDKN2A-214ENST00000579755 KRT28Q7Z3Y7 464 aa34.46■■■■□ 3.11
CDKN2A-214ENST00000579755 KIF1AQ12756 1690 aa34.45■■■■□ 3.11
CDKN2A-214ENST00000579755 PSME1Q06323 249 aa34.45■■■■□ 3.11
CDKN2A-214ENST00000579755 HIRIP3Q9BW71 556 aaPredicted RBP34.43■■■■□ 3.1
CDKN2A-214ENST00000579755 MINK1Q8N4C8 1332 aaPredicted RBP34.42■■■■□ 3.1
CDKN2A-214ENST00000579755 USP21Q9UK80 565 aa34.42■■■■□ 3.1
CDKN2A-214ENST00000579755 COL22A1Q8NFW1 1626 aaPredicted RBP34.41■■■■□ 3.1
CDKN2A-214ENST00000579755 RGPD8O14715 1765 aaPredicted RBP34.41■■■■□ 3.1
CDKN2A-214ENST00000579755 RBM6P78332 1123 aaKnown RBP34.4■■■■□ 3.1
CDKN2A-214ENST00000579755 SPATA31A3Q5VYP0 1347 aa34.39■■■■□ 3.1
CDKN2A-214ENST00000579755 PMFBP1Q8TBY8 1022 aa34.36■■■■□ 3.09
CDKN2A-214ENST00000579755 EIF3AQ14152 1382 aaKnown RBP34.36■■■■□ 3.09
CDKN2A-214ENST00000579755 HAP1P54257 671 aaPredicted RBP34.35■■■■□ 3.09
CDKN2A-214ENST00000579755 LMOD2Q6P5Q4 547 aa34.35■■■■□ 3.09
CDKN2A-214ENST00000579755 ANKARQ7Z5J8 1434 aa34.35■■■■□ 3.09
CDKN2A-214ENST00000579755 CDK12Q9NYV4 1490 aaPredicted RBP34.34■■■■□ 3.09
CDKN2A-214ENST00000579755 FNBP4Q8N3X1 1017 aaPredicted RBP34.34■■■■□ 3.09
CDKN2A-214ENST00000579755 TRPC5Q9UL62 973 aaPredicted RBP34.34■■■■□ 3.09
CDKN2A-214ENST00000579755 WASLO00401 505 aaPredicted RBP34.33■■■■□ 3.09
CDKN2A-214ENST00000579755 ADGRB2O60241 1585 aa34.32■■■■□ 3.08
CDKN2A-214ENST00000579755 PCGF6Q9BYE7 350 aa34.31■■■■□ 3.08
CDKN2A-214ENST00000579755 PLEKHG5O94827 1062 aa34.29■■■■□ 3.08
CDKN2A-214ENST00000579755 TNS3Q68CZ2 1445 aa34.27■■■■□ 3.08
CDKN2A-214ENST00000579755 SBNO1A3KN83 1393 aa34.26■■■■□ 3.08
CDKN2A-214ENST00000579755 GPRASP1Q5JY77 1395 aa34.25■■■■□ 3.07
CDKN2A-214ENST00000579755 USP32Q8NFA0 1604 aa34.24■■■■□ 3.07
CDKN2A-214ENST00000579755 NGDNQ8NEJ9 315 aaKnown RBP34.24■■■■□ 3.07
CDKN2A-214ENST00000579755 UPF1Q92900 1129 aaKnown RBP eCLIP34.24■■■■□ 3.07
CDKN2A-214ENST00000579755 MARF1Q9Y4F3 1742 aaKnown RBP34.24■■■■□ 3.07
CDKN2A-214ENST00000579755 TULP4Q9NRJ4 1543 aa34.23■■■■□ 3.07
CDKN2A-214ENST00000579755 ARHGEF10O15013 1369 aa34.23■■■■□ 3.07
CDKN2A-214ENST00000579755 ARHGEF28Q8N1W1 1705 aaKnown RBP34.22■■■■□ 3.07
CDKN2A-214ENST00000579755 PRR36Q9H6K5 1346 aa34.22■■■■□ 3.07
CDKN2A-214ENST00000579755 KIAA1210Q9ULL0 1709 aa34.21■■■■□ 3.07
CDKN2A-214ENST00000579755 NBPF1Q3BBV0 1214 aa34.21■■■■□ 3.07
CDKN2A-214ENST00000579755 CABLES1Q8TDN4 633 aa34.21■■■■□ 3.07
CDKN2A-214ENST00000579755 RGS12O14924 1447 aa34.21■■■■□ 3.07
CDKN2A-214ENST00000579755 NEUROD1Q13562 356 aa34.2■■■■□ 3.07
CDKN2A-214ENST00000579755 NUDT16Q96DE0 195 aaKnown RBP34.18■■■■□ 3.06
CDKN2A-214ENST00000579755 SIN3AQ96ST3 1273 aa34.18■■■■□ 3.06
CDKN2A-214ENST00000579755 ATRNO75882 1429 aa34.18■■■■□ 3.06
CDKN2A-214ENST00000579755 L3MBTL2Q969R5 705 aa34.17■■■■□ 3.06
CDKN2A-214ENST00000579755 CDK19Q9BWU1 502 aa34.17■■■■□ 3.06
CDKN2A-214ENST00000579755 BCL9LQ86UU0 1499 aa34.16■■■■□ 3.06
CDKN2A-214ENST00000579755 PAK3O75914 559 aaPredicted RBP34.15■■■■□ 3.06
CDKN2A-214ENST00000579755 UNC5CLQ8IV45 518 aa34.15■■■■□ 3.06
CDKN2A-214ENST00000579755 GJD4Q96KN9 370 aaPredicted RBP34.12■■■■□ 3.05
CDKN2A-214ENST00000579755 ITSN1Q15811 1721 aa34.08■■■■□ 3.05
CDKN2A-214ENST00000579755 CENPJQ9HC77 1338 aaPredicted RBP34.07■■■■□ 3.05
CDKN2A-214ENST00000579755 CCDC61Q9Y6R9 512 aa34.07■■■■□ 3.04
CDKN2A-214ENST00000579755 SLIT2O94813 1529 aa34.07■■■■□ 3.04
CDKN2A-214ENST00000579755 SRPK2P78362 688 aaKnown RBP34.05■■■■□ 3.04
CDKN2A-214ENST00000579755 CCDC9Q9Y3X0 531 aaKnown RBP34.05■■■■□ 3.04
CDKN2A-214ENST00000579755 ATAD2Q6PL18 1390 aa34.05■■■■□ 3.04
CDKN2A-214ENST00000579755 ATP7BP35670 1465 aa34.05■■■■□ 3.04
CDKN2A-214ENST00000579755 TRPM3Q9HCF6 1732 aaPredicted RBP34.04■■■■□ 3.04
CDKN2A-214ENST00000579755 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.02■■■■□ 3.04
CDKN2A-214ENST00000579755 FAM83GA6ND36 823 aa34.01■■■■□ 3.03
CDKN2A-214ENST00000579755 ABCA3Q99758 1704 aa33.99■■■■□ 3.03
CDKN2A-214ENST00000579755 ALS2Q96Q42 1657 aa33.99■■■■□ 3.03
CDKN2A-214ENST00000579755 ACEP12821 1306 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms