RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 TRPM1Q7Z4N2 1603 aa29.85■■■□□ 2.37
SCO1-204ENST00000579396 SLAIN2Q9P270 581 aa29.85■■■□□ 2.37
SCO1-204ENST00000579396 GPRASP1Q5JY77 1395 aa29.85■■■□□ 2.37
SCO1-204ENST00000579396 PLEKHH1Q9ULM0 1364 aa29.85■■■□□ 2.37
SCO1-204ENST00000579396 DCCP43146 1447 aa29.83■■■□□ 2.37
SCO1-204ENST00000579396 SCAF1Q9H7N4 1312 aaKnown RBP29.83■■■□□ 2.37
SCO1-204ENST00000579396 SAFB2Q14151 953 aaKnown RBP eCLIP29.83■■■□□ 2.37
SCO1-204ENST00000579396 RALGAPBQ86X10 1494 aa29.81■■■□□ 2.36
SCO1-204ENST00000579396 PIP4K2BP78356 416 aa29.8■■■□□ 2.36
SCO1-204ENST00000579396 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.77■■■□□ 2.36
SCO1-204ENST00000579396 EIF3AQ14152 1382 aaKnown RBP29.77■■■□□ 2.36
SCO1-204ENST00000579396 CENPJQ9HC77 1338 aaPredicted RBP29.76■■■□□ 2.36
SCO1-204ENST00000579396 MINK1Q8N4C8 1332 aaPredicted RBP29.74■■■□□ 2.35
SCO1-204ENST00000579396 HIRIP3Q9BW71 556 aaPredicted RBP29.7■■■□□ 2.35
SCO1-204ENST00000579396 NALCNQ8IZF0 1738 aa29.7■■■□□ 2.34
SCO1-204ENST00000579396 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
SCO1-204ENST00000579396 ARHGEF28Q8N1W1 1705 aaKnown RBP29.68■■■□□ 2.34
SCO1-204ENST00000579396 SLC24A1O60721 1099 aa29.67■■■□□ 2.34
SCO1-204ENST00000579396 MST1RQ04912 1400 aa29.67■■■□□ 2.34
SCO1-204ENST00000579396 CDC42BPGQ6DT37 1551 aa29.65■■■□□ 2.34
SCO1-204ENST00000579396 C1orf167Q5SNV9 1468 aa29.64■■■□□ 2.34
SCO1-204ENST00000579396 NUTM2FA1L443 756 aa29.63■■■□□ 2.33
SCO1-204ENST00000579396 CDK19Q9BWU1 502 aa29.63■■■□□ 2.33
SCO1-204ENST00000579396 ESCO1Q5FWF5 840 aa29.62■■■□□ 2.33
SCO1-204ENST00000579396 BRINP3Q76B58 766 aa29.62■■■□□ 2.33
SCO1-204ENST00000579396 ST20-MTHFSA0A0A6YYL1 179 aa29.6■■■□□ 2.33
SCO1-204ENST00000579396 EVC2Q86UK5 1308 aa29.6■■■□□ 2.33
SCO1-204ENST00000579396 ADGRB2O60241 1585 aa29.6■■■□□ 2.33
SCO1-204ENST00000579396 ORAI2Q96SN7 254 aa29.59■■■□□ 2.33
SCO1-204ENST00000579396 HSPA1LP34931 641 aa29.58■■■□□ 2.33
SCO1-204ENST00000579396 ILDR2Q71H61 639 aa29.58■■■□□ 2.33
SCO1-204ENST00000579396 USP47Q96K76 1375 aa29.58■■■□□ 2.33
SCO1-204ENST00000579396 ANKARQ7Z5J8 1434 aa29.56■■■□□ 2.32
SCO1-204ENST00000579396 SBNO2Q9Y2G9 1366 aa29.56■■■□□ 2.32
SCO1-204ENST00000579396 SRPK2P78362 688 aaKnown RBP29.56■■■□□ 2.32
SCO1-204ENST00000579396 NUDT16Q96DE0 195 aaKnown RBP29.55■■■□□ 2.32
SCO1-204ENST00000579396 EIF4G2P78344 907 aaKnown RBP eCLIP29.54■■■□□ 2.32
SCO1-204ENST00000579396 CCDC61Q9Y6R9 512 aa29.53■■■□□ 2.32
SCO1-204ENST00000579396 FMN2Q9NZ56 1722 aa29.53■■■□□ 2.32
SCO1-204ENST00000579396 ROBO1Q9Y6N7 1651 aa29.53■■■□□ 2.32
SCO1-204ENST00000579396 PHF8Q9UPP1 1060 aa29.52■■■□□ 2.32
SCO1-204ENST00000579396 QRICH2Q9H0J4 1663 aa29.51■■■□□ 2.31
SCO1-204ENST00000579396 TESK2Q96S53 571 aa29.51■■■□□ 2.31
SCO1-204ENST00000579396 CABP2Q9NPB3 220 aa29.51■■■□□ 2.31
SCO1-204ENST00000579396 SOCS7O14512 581 aa29.5■■■□□ 2.31
SCO1-204ENST00000579396 TULP4Q9NRJ4 1543 aa29.5■■■□□ 2.31
SCO1-204ENST00000579396 PRR36Q9H6K5 1346 aa29.49■■■□□ 2.31
SCO1-204ENST00000579396 ZEB1P37275 1124 aaPredicted RBP29.49■■■□□ 2.31
SCO1-204ENST00000579396 PUS7Q96PZ0 661 aaKnown RBP29.48■■■□□ 2.31
SCO1-204ENST00000579396 NPHP3Q7Z494 1330 aa29.47■■■□□ 2.31
SCO1-204ENST00000579396 FOXO3O43524 673 aa29.47■■■□□ 2.31
SCO1-204ENST00000579396 TMF1P82094 1093 aa29.46■■■□□ 2.31
SCO1-204ENST00000579396 PMFBP1Q8TBY8 1022 aa29.44■■■□□ 2.3
SCO1-204ENST00000579396 PLEKHG3A1L390 1219 aa29.43■■■□□ 2.3
SCO1-204ENST00000579396 HSPA5P11021 654 aaKnown RBP29.43■■■□□ 2.3
SCO1-204ENST00000579396 CDCA8Q53HL2 280 aa29.43■■■□□ 2.3
SCO1-204ENST00000579396 LRRC59Q96AG4 307 aaKnown RBP29.43■■■□□ 2.3
SCO1-204ENST00000579396 PSME1Q06323 249 aa29.42■■■□□ 2.3
SCO1-204ENST00000579396 NGDNQ8NEJ9 315 aaKnown RBP29.42■■■□□ 2.3
SCO1-204ENST00000579396 DDX17Q92841 729 aaKnown RBP29.42■■■□□ 2.3
SCO1-204ENST00000579396 SOS2Q07890 1332 aaPredicted RBP29.41■■■□□ 2.3
SCO1-204ENST00000579396 ATAD2Q6PL18 1390 aa29.4■■■□□ 2.3
SCO1-204ENST00000579396 MED1Q15648 1581 aaPredicted RBP29.4■■■□□ 2.3
SCO1-204ENST00000579396 AHDC1Q5TGY3 1603 aaPredicted RBP29.4■■■□□ 2.3
SCO1-204ENST00000579396 ATP7BP35670 1465 aa29.4■■■□□ 2.3
SCO1-204ENST00000579396 KRT28Q7Z3Y7 464 aa29.39■■■□□ 2.3
SCO1-204ENST00000579396 USP32Q8NFA0 1604 aa29.38■■■□□ 2.29
SCO1-204ENST00000579396 CABP1Q9NZU7 370 aa29.38■■■□□ 2.29
SCO1-204ENST00000579396 RGPD8O14715 1765 aaPredicted RBP29.37■■■□□ 2.29
SCO1-204ENST00000579396 PHF23Q9BUL5 403 aaPredicted RBP29.37■■■□□ 2.29
SCO1-204ENST00000579396 KIF1AQ12756 1690 aa29.35■■■□□ 2.29
SCO1-204ENST00000579396 PHLPP1O60346 1717 aa29.35■■■□□ 2.29
SCO1-204ENST00000579396 ACEP12821 1306 aa29.34■■■□□ 2.29
SCO1-204ENST00000579396 PPIP5K1Q6PFW1 1433 aa29.34■■■□□ 2.29
SCO1-204ENST00000579396 ZNF692Q9BU19 519 aaPredicted RBP29.33■■■□□ 2.29
SCO1-204ENST00000579396 NHSL1Q5SYE7 1610 aa29.33■■■□□ 2.29
SCO1-204ENST00000579396 XPCQ01831 940 aaPredicted RBP29.32■■■□□ 2.28
SCO1-204ENST00000579396 POLR3AO14802 1390 aaPredicted RBP29.31■■■□□ 2.28
SCO1-204ENST00000579396 JCADQ9P266 1359 aa29.31■■■□□ 2.28
SCO1-204ENST00000579396 TMC1Q8TDI8 760 aa29.3■■■□□ 2.28
SCO1-204ENST00000579396 ITSN1Q15811 1721 aa29.3■■■□□ 2.28
SCO1-204ENST00000579396 SBNO1A3KN83 1393 aa29.27■■■□□ 2.28
SCO1-204ENST00000579396 COL16A1Q07092 1604 aaPredicted RBP29.27■■■□□ 2.28
SCO1-204ENST00000579396 PXDNQ92626 1479 aa29.26■■■□□ 2.27
SCO1-204ENST00000579396 SLC12A5Q9H2X9 1139 aa29.26■■■□□ 2.27
SCO1-204ENST00000579396 SPATA31A3Q5VYP0 1347 aa29.25■■■□□ 2.27
SCO1-204ENST00000579396 NINLQ9Y2I6 1382 aa29.25■■■□□ 2.27
SCO1-204ENST00000579396 HDGFL2Q7Z4V5 671 aaPredicted RBP29.24■■■□□ 2.27
SCO1-204ENST00000579396 TERF2IPQ9NYB0 399 aa29.24■■■□□ 2.27
SCO1-204ENST00000579396 BRD4O60885 1362 aaPredicted RBP29.24■■■□□ 2.27
SCO1-204ENST00000579396 PAK3O75914 559 aaPredicted RBP29.23■■■□□ 2.27
SCO1-204ENST00000579396 TOPAZ1Q8N9V7 1692 aa29.23■■■□□ 2.27
SCO1-204ENST00000579396 SPATA31A6Q5VVP1 1343 aa29.21■■■□□ 2.27
SCO1-204ENST00000579396 LMOD2Q6P5Q4 547 aa29.2■■■□□ 2.26
SCO1-204ENST00000579396 ARHGEF10O15013 1369 aa29.18■■■□□ 2.26
SCO1-204ENST00000579396 PNPLA6Q8IY17 1366 aa29.18■■■□□ 2.26
SCO1-204ENST00000579396 POLR3GLQ9BT43 218 aa29.17■■■□□ 2.26
SCO1-204ENST00000579396 CPSF1Q10570 1443 aaKnown RBP29.17■■■□□ 2.26
SCO1-204ENST00000579396 TNS3Q68CZ2 1445 aa29.17■■■□□ 2.26
SCO1-204ENST00000579396 KTN1Q86UP2 1357 aaKnown RBP29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms