RNA–Protein interactions for RNA: ENST00000579128.1

TYMS-204, Transcript of thymidylate synthetase, humanhuman

TSL 2

Gene TYMS, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-204ENST00000579128 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
TYMS-204ENST00000579128 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
TYMS-204ENST00000579128 LAMC1P11047 1609 aa18.55■□□□□ 0.56
TYMS-204ENST00000579128 NHSL1Q5SYE7 1610 aa18.55■□□□□ 0.56
TYMS-204ENST00000579128 WAPLQ7Z5K2 1190 aa18.54■□□□□ 0.56
TYMS-204ENST00000579128 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
TYMS-204ENST00000579128 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
TYMS-204ENST00000579128 SOS2Q07890 1332 aaPredicted RBP18.53■□□□□ 0.56
TYMS-204ENST00000579128 NUTM2BA6NNL0 878 aaPredicted RBP18.53■□□□□ 0.56
TYMS-204ENST00000579128 NUTM2EB1AL46 878 aaPredicted RBP18.53■□□□□ 0.56
TYMS-204ENST00000579128 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
TYMS-204ENST00000579128 POTEAQ6S8J7 498 aa18.53■□□□□ 0.56
TYMS-204ENST00000579128 NUTM2AQ8IVF1 878 aaPredicted RBP18.53■□□□□ 0.56
TYMS-204ENST00000579128 KNDC1Q76NI1 1749 aa18.52■□□□□ 0.56
TYMS-204ENST00000579128 DCAF11Q8TEB1 546 aa18.52■□□□□ 0.56
TYMS-204ENST00000579128 POGKQ9P215 609 aa18.5■□□□□ 0.55
TYMS-204ENST00000579128 KDM2AQ9Y2K7 1162 aa18.5■□□□□ 0.55
TYMS-204ENST00000579128 DDX17Q92841 729 aaKnown RBP18.49■□□□□ 0.55
TYMS-204ENST00000579128 PNPLA6Q8IY17 1366 aa18.49■□□□□ 0.55
TYMS-204ENST00000579128 LRP6O75581 1613 aa18.48■□□□□ 0.55
TYMS-204ENST00000579128 FOXO3O43524 673 aa18.46■□□□□ 0.55
TYMS-204ENST00000579128 PRAM1Q96QH2 718 aa18.46■□□□□ 0.55
TYMS-204ENST00000579128 RXRBP28702 533 aa18.45■□□□□ 0.54
TYMS-204ENST00000579128 DLC1Q96QB1 1528 aa18.44■□□□□ 0.54
TYMS-204ENST00000579128 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
TYMS-204ENST00000579128 NUTM2FA1L443 756 aa18.44■□□□□ 0.54
TYMS-204ENST00000579128 PSME1Q06323 249 aa18.44■□□□□ 0.54
TYMS-204ENST00000579128 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
TYMS-204ENST00000579128 C8orf37Q96NL8 207 aa18.44■□□□□ 0.54
TYMS-204ENST00000579128 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
TYMS-204ENST00000579128 AFF2P51816 1311 aa18.43■□□□□ 0.54
TYMS-204ENST00000579128 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
TYMS-204ENST00000579128 ADAMTS2O95450 1211 aa18.41■□□□□ 0.54
TYMS-204ENST00000579128 SAFB2Q14151 953 aaKnown RBP eCLIP18.41■□□□□ 0.54
TYMS-204ENST00000579128 PHF8Q9UPP1 1060 aa18.41■□□□□ 0.54
TYMS-204ENST00000579128 KIF1AQ12756 1690 aa18.39■□□□□ 0.53
TYMS-204ENST00000579128 KRT28Q7Z3Y7 464 aa18.39■□□□□ 0.53
TYMS-204ENST00000579128 FMN2Q9NZ56 1722 aa18.39■□□□□ 0.53
TYMS-204ENST00000579128 ANKARQ7Z5J8 1434 aa18.39■□□□□ 0.53
TYMS-204ENST00000579128 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
TYMS-204ENST00000579128 QTRT2Q9H974 415 aaKnown RBP18.38■□□□□ 0.53
TYMS-204ENST00000579128 ADGRB1O14514 1584 aa18.38■□□□□ 0.53
TYMS-204ENST00000579128 PXDNQ92626 1479 aa18.37■□□□□ 0.53
TYMS-204ENST00000579128 CDK12Q9NYV4 1490 aaPredicted RBP18.37■□□□□ 0.53
TYMS-204ENST00000579128 SPATA31A3Q5VYP0 1347 aa18.36■□□□□ 0.53
TYMS-204ENST00000579128 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
TYMS-204ENST00000579128 FNBP4Q8N3X1 1017 aaPredicted RBP18.35■□□□□ 0.53
TYMS-204ENST00000579128 USP21Q9UK80 565 aa18.35■□□□□ 0.53
TYMS-204ENST00000579128 TRPC5Q9UL62 973 aaPredicted RBP18.35■□□□□ 0.53
TYMS-204ENST00000579128 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
TYMS-204ENST00000579128 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
TYMS-204ENST00000579128 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
TYMS-204ENST00000579128 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
TYMS-204ENST00000579128 SBNO1A3KN83 1393 aa18.32■□□□□ 0.52
TYMS-204ENST00000579128 ARHGEF10O15013 1369 aa18.32■□□□□ 0.52
TYMS-204ENST00000579128 GPRASP1Q5JY77 1395 aa18.32■□□□□ 0.52
TYMS-204ENST00000579128 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
TYMS-204ENST00000579128 HIRIP3Q9BW71 556 aaPredicted RBP18.31■□□□□ 0.52
TYMS-204ENST00000579128 TNS3Q68CZ2 1445 aa18.3■□□□□ 0.52
TYMS-204ENST00000579128 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
TYMS-204ENST00000579128 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
TYMS-204ENST00000579128 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
TYMS-204ENST00000579128 NGDNQ8NEJ9 315 aaKnown RBP18.28■□□□□ 0.52
TYMS-204ENST00000579128 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.51
TYMS-204ENST00000579128 RGPD8O14715 1765 aaPredicted RBP18.26■□□□□ 0.51
TYMS-204ENST00000579128 UPF1Q92900 1129 aaKnown RBP eCLIP18.25■□□□□ 0.51
TYMS-204ENST00000579128 L3MBTL2Q969R5 705 aa18.24■□□□□ 0.51
TYMS-204ENST00000579128 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
TYMS-204ENST00000579128 CCDC61Q9Y6R9 512 aa18.24■□□□□ 0.51
TYMS-204ENST00000579128 UNC5CLQ8IV45 518 aa18.23■□□□□ 0.51
TYMS-204ENST00000579128 CDK19Q9BWU1 502 aa18.23■□□□□ 0.51
TYMS-204ENST00000579128 GJD4Q96KN9 370 aaPredicted RBP18.22■□□□□ 0.51
TYMS-204ENST00000579128 ARHGEF28Q8N1W1 1705 aaKnown RBP18.22■□□□□ 0.51
TYMS-204ENST00000579128 MARF1Q9Y4F3 1742 aaKnown RBP18.22■□□□□ 0.51
TYMS-204ENST00000579128 ATRNO75882 1429 aa18.22■□□□□ 0.51
TYMS-204ENST00000579128 PRR36Q9H6K5 1346 aa18.22■□□□□ 0.51
TYMS-204ENST00000579128 CENPJQ9HC77 1338 aaPredicted RBP18.22■□□□□ 0.51
TYMS-204ENST00000579128 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
TYMS-204ENST00000579128 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
TYMS-204ENST00000579128 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
TYMS-204ENST00000579128 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
TYMS-204ENST00000579128 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
TYMS-204ENST00000579128 RGS12O14924 1447 aa18.19■□□□□ 0.5
TYMS-204ENST00000579128 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
TYMS-204ENST00000579128 SIN3AQ96ST3 1273 aa18.19■□□□□ 0.5
TYMS-204ENST00000579128 ATAD2Q6PL18 1390 aa18.18■□□□□ 0.5
TYMS-204ENST00000579128 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
TYMS-204ENST00000579128 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
TYMS-204ENST00000579128 CABLES1Q8TDN4 633 aa18.18■□□□□ 0.5
TYMS-204ENST00000579128 SLIT2O94813 1529 aa18.18■□□□□ 0.5
TYMS-204ENST00000579128 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
TYMS-204ENST00000579128 ATP7BP35670 1465 aa18.16■□□□□ 0.5
TYMS-204ENST00000579128 PLEKHG5O94827 1062 aa18.15■□□□□ 0.5
TYMS-204ENST00000579128 VPS72Q15906 364 aa18.15■□□□□ 0.5
TYMS-204ENST00000579128 NBPF8Q3BBV2 869 aa18.15■□□□□ 0.5
TYMS-204ENST00000579128 CCDC125Q86Z20 511 aa18.15■□□□□ 0.5
TYMS-204ENST00000579128 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
TYMS-204ENST00000579128 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.15■□□□□ 0.5
TYMS-204ENST00000579128 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
TYMS-204ENST00000579128 ACEP12821 1306 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms