RNA–Protein interactions for RNA: ENST00000579070.5

SNRPN-209, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-209ENST00000579070 GPRASP1Q5JY77 1395 aa20.72■□□□□ 0.91
SNRPN-209ENST00000579070 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.71■□□□□ 0.91
SNRPN-209ENST00000579070 ATF3P18847 181 aa20.71■□□□□ 0.91
SNRPN-209ENST00000579070 SAFB2Q14151 953 aaKnown RBP eCLIP20.71■□□□□ 0.91
SNRPN-209ENST00000579070 ARHGEF28Q8N1W1 1705 aaKnown RBP20.7■□□□□ 0.9
SNRPN-209ENST00000579070 CADPS2Q86UW7 1296 aa20.7■□□□□ 0.9
SNRPN-209ENST00000579070 SCAF1Q9H7N4 1312 aaKnown RBP20.7■□□□□ 0.9
SNRPN-209ENST00000579070 PIP4K2BP78356 416 aa20.69■□□□□ 0.9
SNRPN-209ENST00000579070 CARD11Q9BXL7 1154 aa20.69■□□□□ 0.9
SNRPN-209ENST00000579070 CDC42BPGQ6DT37 1551 aa20.68■□□□□ 0.9
SNRPN-209ENST00000579070 MST1RQ04912 1400 aa20.65■□□□□ 0.9
SNRPN-209ENST00000579070 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
SNRPN-209ENST00000579070 MINK1Q8N4C8 1332 aaPredicted RBP20.64■□□□□ 0.89
SNRPN-209ENST00000579070 CENPJQ9HC77 1338 aaPredicted RBP20.64■□□□□ 0.89
SNRPN-209ENST00000579070 SLAIN2Q9P270 581 aa20.64■□□□□ 0.89
SNRPN-209ENST00000579070 ADGRB2O60241 1585 aa20.63■□□□□ 0.89
SNRPN-209ENST00000579070 HIRIP3Q9BW71 556 aaPredicted RBP20.62■□□□□ 0.89
SNRPN-209ENST00000579070 ILDR1Q86SU0 546 aaPredicted RBP20.6■□□□□ 0.89
SNRPN-209ENST00000579070 C1orf167Q5SNV9 1468 aa20.6■□□□□ 0.89
SNRPN-209ENST00000579070 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.89
SNRPN-209ENST00000579070 ROBO1Q9Y6N7 1651 aa20.58■□□□□ 0.89
SNRPN-209ENST00000579070 FMN2Q9NZ56 1722 aa20.58■□□□□ 0.88
SNRPN-209ENST00000579070 NUTM2FA1L443 756 aa20.57■□□□□ 0.88
SNRPN-209ENST00000579070 WASLO00401 505 aaPredicted RBP20.56■□□□□ 0.88
SNRPN-209ENST00000579070 USP47Q96K76 1375 aa20.56■□□□□ 0.88
SNRPN-209ENST00000579070 BRINP3Q76B58 766 aa20.55■□□□□ 0.88
SNRPN-209ENST00000579070 ANKARQ7Z5J8 1434 aa20.53■□□□□ 0.88
SNRPN-209ENST00000579070 TULP4Q9NRJ4 1543 aa20.53■□□□□ 0.88
SNRPN-209ENST00000579070 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
SNRPN-209ENST00000579070 SBNO2Q9Y2G9 1366 aa20.51■□□□□ 0.87
SNRPN-209ENST00000579070 HSPA1LP34931 641 aa20.51■□□□□ 0.87
SNRPN-209ENST00000579070 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
SNRPN-209ENST00000579070 CDK19Q9BWU1 502 aa20.51■□□□□ 0.87
SNRPN-209ENST00000579070 ATP7BP35670 1465 aa20.5■□□□□ 0.87
SNRPN-209ENST00000579070 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
SNRPN-209ENST00000579070 ST20-MTHFSA0A0A6YYL1 179 aa20.49■□□□□ 0.87
SNRPN-209ENST00000579070 EVC2Q86UK5 1308 aa20.49■□□□□ 0.87
SNRPN-209ENST00000579070 PRR36Q9H6K5 1346 aa20.49■□□□□ 0.87
SNRPN-209ENST00000579070 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
SNRPN-209ENST00000579070 AHDC1Q5TGY3 1603 aaPredicted RBP20.48■□□□□ 0.87
SNRPN-209ENST00000579070 CABP2Q9NPB3 220 aa20.46■□□□□ 0.87
SNRPN-209ENST00000579070 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
SNRPN-209ENST00000579070 DDX17Q92841 729 aaKnown RBP20.45■□□□□ 0.86
SNRPN-209ENST00000579070 NUDT16Q96DE0 195 aaKnown RBP20.45■□□□□ 0.86
SNRPN-209ENST00000579070 PHF8Q9UPP1 1060 aa20.45■□□□□ 0.86
SNRPN-209ENST00000579070 NHSL1Q5SYE7 1610 aa20.45■□□□□ 0.86
SNRPN-209ENST00000579070 TESK2Q96S53 571 aa20.44■□□□□ 0.86
SNRPN-209ENST00000579070 PHLPP1O60346 1717 aa20.44■□□□□ 0.86
SNRPN-209ENST00000579070 EIF4G2P78344 907 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNRPN-209ENST00000579070 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
SNRPN-209ENST00000579070 NPHP3Q7Z494 1330 aa20.42■□□□□ 0.86
SNRPN-209ENST00000579070 COL16A1Q07092 1604 aaPredicted RBP20.42■□□□□ 0.86
SNRPN-209ENST00000579070 FOXO3O43524 673 aa20.41■□□□□ 0.86
SNRPN-209ENST00000579070 TOPAZ1Q8N9V7 1692 aa20.41■□□□□ 0.86
SNRPN-209ENST00000579070 ITSN1Q15811 1721 aa20.41■□□□□ 0.86
SNRPN-209ENST00000579070 RGPD8O14715 1765 aaPredicted RBP20.4■□□□□ 0.86
SNRPN-209ENST00000579070 HSPA5P11021 654 aaKnown RBP20.4■□□□□ 0.86
SNRPN-209ENST00000579070 CCDC61Q9Y6R9 512 aa20.4■□□□□ 0.86
SNRPN-209ENST00000579070 PPIP5K1Q6PFW1 1433 aa20.39■□□□□ 0.85
SNRPN-209ENST00000579070 ATAD2Q6PL18 1390 aa20.39■□□□□ 0.85
SNRPN-209ENST00000579070 SLC24A1O60721 1099 aa20.39■□□□□ 0.85
SNRPN-209ENST00000579070 DISP3Q9P2K9 1392 aa20.38■□□□□ 0.85
SNRPN-209ENST00000579070 TMF1P82094 1093 aa20.38■□□□□ 0.85
SNRPN-209ENST00000579070 XPCQ01831 940 aaPredicted RBP20.38■□□□□ 0.85
SNRPN-209ENST00000579070 PXDNQ92626 1479 aa20.37■□□□□ 0.85
SNRPN-209ENST00000579070 SOS2Q07890 1332 aaPredicted RBP20.37■□□□□ 0.85
SNRPN-209ENST00000579070 NGDNQ8NEJ9 315 aaKnown RBP20.37■□□□□ 0.85
SNRPN-209ENST00000579070 JCADQ9P266 1359 aa20.34■□□□□ 0.85
SNRPN-209ENST00000579070 PLEKHG3A1L390 1219 aa20.34■□□□□ 0.85
SNRPN-209ENST00000579070 KRT28Q7Z3Y7 464 aa20.34■□□□□ 0.85
SNRPN-209ENST00000579070 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
SNRPN-209ENST00000579070 ACEP12821 1306 aa20.33■□□□□ 0.85
SNRPN-209ENST00000579070 PSME1Q06323 249 aa20.33■□□□□ 0.85
SNRPN-209ENST00000579070 LRRC59Q96AG4 307 aaKnown RBP20.33■□□□□ 0.85
SNRPN-209ENST00000579070 CABP1Q9NZU7 370 aa20.33■□□□□ 0.85
SNRPN-209ENST00000579070 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
SNRPN-209ENST00000579070 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
SNRPN-209ENST00000579070 CDCA8Q53HL2 280 aa20.31■□□□□ 0.84
SNRPN-209ENST00000579070 PNPLA6Q8IY17 1366 aa20.3■□□□□ 0.84
SNRPN-209ENST00000579070 TNS3Q68CZ2 1445 aa20.29■□□□□ 0.84
SNRPN-209ENST00000579070 TMC1Q8TDI8 760 aa20.29■□□□□ 0.84
SNRPN-209ENST00000579070 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
SNRPN-209ENST00000579070 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
SNRPN-209ENST00000579070 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.84
SNRPN-209ENST00000579070 NINLQ9Y2I6 1382 aa20.27■□□□□ 0.84
SNRPN-209ENST00000579070 TRPM3Q9HCF6 1732 aaPredicted RBP20.26■□□□□ 0.83
SNRPN-209ENST00000579070 USP6P35125 1406 aa20.26■□□□□ 0.83
SNRPN-209ENST00000579070 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
SNRPN-209ENST00000579070 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
SNRPN-209ENST00000579070 SLC12A5Q9H2X9 1139 aa20.25■□□□□ 0.83
SNRPN-209ENST00000579070 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
SNRPN-209ENST00000579070 LMOD2Q6P5Q4 547 aa20.24■□□□□ 0.83
SNRPN-209ENST00000579070 CPSF1Q10570 1443 aaKnown RBP20.24■□□□□ 0.83
SNRPN-209ENST00000579070 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
SNRPN-209ENST00000579070 CD163L1Q9NR16 1453 aa20.24■□□□□ 0.83
SNRPN-209ENST00000579070 HDGFL2Q7Z4V5 671 aaPredicted RBP20.23■□□□□ 0.83
SNRPN-209ENST00000579070 KTN1Q86UP2 1357 aaKnown RBP20.22■□□□□ 0.83
SNRPN-209ENST00000579070 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
SNRPN-209ENST00000579070 A0A1W2PP64 1363 aa20.21■□□□□ 0.83
SNRPN-209ENST00000579070 BRD4O60885 1362 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms