RNA–Protein interactions for RNA: ENST00000578998.1

RBFOX3-202, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 3,072 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-202ENST00000578998 TET3O43151 1660 aa16.91■□□□□ 0.3
RBFOX3-202ENST00000578998 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
RBFOX3-202ENST00000578998 SPRYD3Q8NCJ5 442 aa16.9■□□□□ 0.3
RBFOX3-202ENST00000578998 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
RBFOX3-202ENST00000578998 SRPK2P78362 688 aaKnown RBP16.9■□□□□ 0.3
RBFOX3-202ENST00000578998 UHRF1BP1LA0JNW5 1464 aa16.9■□□□□ 0.3
RBFOX3-202ENST00000578998 PDE3AQ14432 1141 aa16.9■□□□□ 0.3
RBFOX3-202ENST00000578998 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
RBFOX3-202ENST00000578998 GSE1Q14687 1217 aa16.89■□□□□ 0.29
RBFOX3-202ENST00000578998 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
RBFOX3-202ENST00000578998 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
RBFOX3-202ENST00000578998 MAP3K4Q9Y6R4 1608 aa16.88■□□□□ 0.29
RBFOX3-202ENST00000578998 POLR3AO14802 1390 aaPredicted RBP16.87■□□□□ 0.29
RBFOX3-202ENST00000578998 ARXQ96QS3 562 aa16.87■□□□□ 0.29
RBFOX3-202ENST00000578998 FTSJ3Q8IY81 847 aaKnown RBP16.87■□□□□ 0.29
RBFOX3-202ENST00000578998 PDZRN3Q9UPQ7 1066 aa16.86■□□□□ 0.29
RBFOX3-202ENST00000578998 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
RBFOX3-202ENST00000578998 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
RBFOX3-202ENST00000578998 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
RBFOX3-202ENST00000578998 MROH2AA6NES4 1674 aa16.83■□□□□ 0.29
RBFOX3-202ENST00000578998 NPATQ14207 1427 aa16.83■□□□□ 0.29
RBFOX3-202ENST00000578998 KIF1BO60333 1816 aa16.83■□□□□ 0.28
RBFOX3-202ENST00000578998 FBLN1P23142 703 aa16.83■□□□□ 0.28
RBFOX3-202ENST00000578998 SMC4Q9NTJ3 1288 aa16.83■□□□□ 0.28
RBFOX3-202ENST00000578998 MYOM2P54296 1465 aa16.83■□□□□ 0.28
RBFOX3-202ENST00000578998 INO80Q9ULG1 1556 aaPredicted RBP16.83■□□□□ 0.28
RBFOX3-202ENST00000578998 DEPDC5O75140 1603 aa16.83■□□□□ 0.28
RBFOX3-202ENST00000578998 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
RBFOX3-202ENST00000578998 USP19O94966 1318 aa16.82■□□□□ 0.28
RBFOX3-202ENST00000578998 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
RBFOX3-202ENST00000578998 PMFBP1Q8TBY8 1022 aa16.81■□□□□ 0.28
RBFOX3-202ENST00000578998 PPRC1Q5VV67 1664 aaKnown RBP16.81■□□□□ 0.28
RBFOX3-202ENST00000578998 MROH1Q8NDA8 1641 aa16.81■□□□□ 0.28
RBFOX3-202ENST00000578998 EFCAB6Q5THR3 1501 aa16.81■□□□□ 0.28
RBFOX3-202ENST00000578998 ITPRIPQ8IWB1 547 aa16.81■□□□□ 0.28
RBFOX3-202ENST00000578998 NGEFQ8N5V2 710 aa16.81■□□□□ 0.28
RBFOX3-202ENST00000578998 MYH16Q9H6N6 1097 aa16.81■□□□□ 0.28
RBFOX3-202ENST00000578998 POGKQ9P215 609 aa16.81■□□□□ 0.28
RBFOX3-202ENST00000578998 VWDEQ8N2E2 1590 aa16.8■□□□□ 0.28
RBFOX3-202ENST00000578998 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
RBFOX3-202ENST00000578998 UPF2Q9HAU5 1272 aaKnown RBP16.8■□□□□ 0.28
RBFOX3-202ENST00000578998 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
RBFOX3-202ENST00000578998 IDI1Q13907 227 aa16.79■□□□□ 0.28
RBFOX3-202ENST00000578998 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
RBFOX3-202ENST00000578998 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
RBFOX3-202ENST00000578998 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
RBFOX3-202ENST00000578998 ANO8Q9HCE9 1232 aaPredicted RBP16.78■□□□□ 0.28
RBFOX3-202ENST00000578998 BECN1Q14457 450 aa16.78■□□□□ 0.28
RBFOX3-202ENST00000578998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
RBFOX3-202ENST00000578998 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.28
RBFOX3-202ENST00000578998 CD109Q6YHK3 1445 aa16.77■□□□□ 0.28
RBFOX3-202ENST00000578998 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.28
RBFOX3-202ENST00000578998 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.77■□□□□ 0.28
RBFOX3-202ENST00000578998 ARAP3Q8WWN8 1544 aa16.76■□□□□ 0.27
RBFOX3-202ENST00000578998 PRAM1Q96QH2 718 aa16.76■□□□□ 0.27
RBFOX3-202ENST00000578998 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
RBFOX3-202ENST00000578998 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
RBFOX3-202ENST00000578998 ZNF518AQ6AHZ1 1483 aa16.76■□□□□ 0.27
RBFOX3-202ENST00000578998 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
RBFOX3-202ENST00000578998 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
RBFOX3-202ENST00000578998 STAG3Q9UJ98 1225 aa16.76■□□□□ 0.27
RBFOX3-202ENST00000578998 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
RBFOX3-202ENST00000578998 RIPK4P57078 832 aa16.75■□□□□ 0.27
RBFOX3-202ENST00000578998 TMPOP42166 694 aaKnown RBP16.75■□□□□ 0.27
RBFOX3-202ENST00000578998 NOB1Q9ULX3 412 aaKnown RBP16.74■□□□□ 0.27
RBFOX3-202ENST00000578998 TRIM27P14373 513 aa16.73■□□□□ 0.27
RBFOX3-202ENST00000578998 ELL2O00472 640 aaPredicted RBP16.73■□□□□ 0.27
RBFOX3-202ENST00000578998 A0A1W2PP64 1363 aa16.73■□□□□ 0.27
RBFOX3-202ENST00000578998 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
RBFOX3-202ENST00000578998 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
RBFOX3-202ENST00000578998 ANKRD36BQ8N2N9 1353 aa16.72■□□□□ 0.27
RBFOX3-202ENST00000578998 NINLQ9Y2I6 1382 aa16.72■□□□□ 0.27
RBFOX3-202ENST00000578998 ADGRB3O60242 1522 aa16.72■□□□□ 0.27
RBFOX3-202ENST00000578998 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
RBFOX3-202ENST00000578998 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
RBFOX3-202ENST00000578998 NRXN1Q9ULB1 1477 aa16.71■□□□□ 0.27
RBFOX3-202ENST00000578998 FYB1O15117 783 aa16.71■□□□□ 0.27
RBFOX3-202ENST00000578998 HMOX1P09601 288 aa16.71■□□□□ 0.27
RBFOX3-202ENST00000578998 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
RBFOX3-202ENST00000578998 RPGRIP1LQ68CZ1 1315 aa16.71■□□□□ 0.26
RBFOX3-202ENST00000578998 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.26
RBFOX3-202ENST00000578998 CABP1Q9NZU7 370 aa16.71■□□□□ 0.26
RBFOX3-202ENST00000578998 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
RBFOX3-202ENST00000578998 GZF1Q9H116 711 aaPredicted RBP16.7■□□□□ 0.26
RBFOX3-202ENST00000578998 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
RBFOX3-202ENST00000578998 CCDC27Q2M243 656 aa16.69■□□□□ 0.26
RBFOX3-202ENST00000578998 ADGRB1O14514 1584 aa16.69■□□□□ 0.26
RBFOX3-202ENST00000578998 DIAPH1O60610 1272 aaKnown RBP16.68■□□□□ 0.26
RBFOX3-202ENST00000578998 TERF2IPQ9NYB0 399 aa16.68■□□□□ 0.26
RBFOX3-202ENST00000578998 IQSEC2Q5JU85 1478 aa16.68■□□□□ 0.26
RBFOX3-202ENST00000578998 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
RBFOX3-202ENST00000578998 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
RBFOX3-202ENST00000578998 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
RBFOX3-202ENST00000578998 C1orf115Q9H7X2 142 aa16.68■□□□□ 0.26
RBFOX3-202ENST00000578998 POGZQ7Z3K3 1410 aa16.68■□□□□ 0.26
RBFOX3-202ENST00000578998 MLECQ14165 292 aa16.67■□□□□ 0.26
RBFOX3-202ENST00000578998 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
RBFOX3-202ENST00000578998 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
RBFOX3-202ENST00000578998 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
RBFOX3-202ENST00000578998 IFT172Q9UG01 1749 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms