RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
GGA3-207ENST00000578896 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.28
GGA3-207ENST00000578896 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
GGA3-207ENST00000578896 SOS2Q07890 1332 aaPredicted RBP13.29□□□□□ -0.28
GGA3-207ENST00000578896 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
GGA3-207ENST00000578896 IFT172Q9UG01 1749 aa13.27□□□□□ -0.28
GGA3-207ENST00000578896 FOXO3O43524 673 aa13.27□□□□□ -0.29
GGA3-207ENST00000578896 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
GGA3-207ENST00000578896 CFAP70Q5T0N1 1121 aa13.26□□□□□ -0.29
GGA3-207ENST00000578896 PRAG1Q86YV5 1406 aa13.26□□□□□ -0.29
GGA3-207ENST00000578896 ANKRD30BQ9BXX2 1392 aa13.26□□□□□ -0.29
GGA3-207ENST00000578896 LAMC1P11047 1609 aa13.24□□□□□ -0.29
GGA3-207ENST00000578896 PIK3C2GO75747 1445 aa13.24□□□□□ -0.29
GGA3-207ENST00000578896 ABCC11Q96J66 1382 aa13.24□□□□□ -0.29
GGA3-207ENST00000578896 RAB3GAP2Q9H2M9 1393 aa13.24□□□□□ -0.29
GGA3-207ENST00000578896 RBM6P78332 1123 aaKnown RBP13.24□□□□□ -0.29
GGA3-207ENST00000578896 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
GGA3-207ENST00000578896 YTHDC2Q9H6S0 1430 aaKnown RBP13.23□□□□□ -0.29
GGA3-207ENST00000578896 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
GGA3-207ENST00000578896 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
GGA3-207ENST00000578896 USP21Q9UK80 565 aa13.23□□□□□ -0.29
GGA3-207ENST00000578896 CDC42BPGQ6DT37 1551 aa13.23□□□□□ -0.29
GGA3-207ENST00000578896 RGS12O14924 1447 aa13.22□□□□□ -0.29
GGA3-207ENST00000578896 TECPR2O15040 1411 aa13.22□□□□□ -0.29
GGA3-207ENST00000578896 NPHP3Q7Z494 1330 aa13.22□□□□□ -0.29
GGA3-207ENST00000578896 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
GGA3-207ENST00000578896 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.29
GGA3-207ENST00000578896 PXDNQ92626 1479 aa13.21□□□□□ -0.3
GGA3-207ENST00000578896 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
GGA3-207ENST00000578896 PRAM1Q96QH2 718 aa13.2□□□□□ -0.3
GGA3-207ENST00000578896 CDK12Q9NYV4 1490 aaPredicted RBP13.19□□□□□ -0.3
GGA3-207ENST00000578896 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
GGA3-207ENST00000578896 FNBP4Q8N3X1 1017 aaPredicted RBP13.19□□□□□ -0.3
GGA3-207ENST00000578896 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
GGA3-207ENST00000578896 MYOM2P54296 1465 aa13.18□□□□□ -0.3
GGA3-207ENST00000578896 TRPC5Q9UL62 973 aaPredicted RBP13.18□□□□□ -0.3
GGA3-207ENST00000578896 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
GGA3-207ENST00000578896 COL22A1Q8NFW1 1626 aaPredicted RBP13.17□□□□□ -0.3
GGA3-207ENST00000578896 CABLES1Q8TDN4 633 aa13.17□□□□□ -0.3
GGA3-207ENST00000578896 TRAK1Q9UPV9 953 aa13.17□□□□□ -0.3
GGA3-207ENST00000578896 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
GGA3-207ENST00000578896 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
GGA3-207ENST00000578896 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
GGA3-207ENST00000578896 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
GGA3-207ENST00000578896 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
GGA3-207ENST00000578896 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
GGA3-207ENST00000578896 POGKQ9P215 609 aa13.16□□□□□ -0.3
GGA3-207ENST00000578896 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
GGA3-207ENST00000578896 ATRNO75882 1429 aa13.15□□□□□ -0.3
GGA3-207ENST00000578896 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
GGA3-207ENST00000578896 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
GGA3-207ENST00000578896 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
GGA3-207ENST00000578896 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
GGA3-207ENST00000578896 ACIN1Q9UKV3 1341 aaKnown RBP13.13□□□□□ -0.31
GGA3-207ENST00000578896 EP400Q96L91 3159 aa13.12□□□□□ -0.31
GGA3-207ENST00000578896 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
GGA3-207ENST00000578896 PSME1Q06323 249 aa13.12□□□□□ -0.31
GGA3-207ENST00000578896 GJD4Q96KN9 370 aaPredicted RBP13.12□□□□□ -0.31
GGA3-207ENST00000578896 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
GGA3-207ENST00000578896 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
GGA3-207ENST00000578896 UNC5CLQ8IV45 518 aa13.1□□□□□ -0.31
GGA3-207ENST00000578896 SRCAPQ6ZRS2 3230 aa13.1□□□□□ -0.31
GGA3-207ENST00000578896 PRR36Q9H6K5 1346 aa13.1□□□□□ -0.31
GGA3-207ENST00000578896 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
GGA3-207ENST00000578896 ATAD2Q6PL18 1390 aa13.09□□□□□ -0.31
GGA3-207ENST00000578896 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
GGA3-207ENST00000578896 DLC1Q96QB1 1528 aa13.08□□□□□ -0.31
GGA3-207ENST00000578896 SLIT2O94813 1529 aa13.08□□□□□ -0.32
GGA3-207ENST00000578896 RALGAPBQ86X10 1494 aa13.07□□□□□ -0.32
GGA3-207ENST00000578896 GLI3P10071 1580 aa13.07□□□□□ -0.32
GGA3-207ENST00000578896 FAM83GA6ND36 823 aa13.06□□□□□ -0.32
GGA3-207ENST00000578896 WASLO00401 505 aaPredicted RBP13.06□□□□□ -0.32
GGA3-207ENST00000578896 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
GGA3-207ENST00000578896 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
GGA3-207ENST00000578896 BRWD3Q6RI45 1802 aa13.05□□□□□ -0.32
GGA3-207ENST00000578896 ANKARQ7Z5J8 1434 aa13.05□□□□□ -0.32
GGA3-207ENST00000578896 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
GGA3-207ENST00000578896 HRCP23327 699 aa13.04□□□□□ -0.32
GGA3-207ENST00000578896 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
GGA3-207ENST00000578896 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
GGA3-207ENST00000578896 ABCA3Q99758 1704 aa13.04□□□□□ -0.32
GGA3-207ENST00000578896 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.04□□□□□ -0.32
GGA3-207ENST00000578896 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
GGA3-207ENST00000578896 PLCH1Q4KWH8 1693 aa13.03□□□□□ -0.32
GGA3-207ENST00000578896 ARHGEF10O15013 1369 aa13.03□□□□□ -0.32
GGA3-207ENST00000578896 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.32
GGA3-207ENST00000578896 VPS72Q15906 364 aa13.02□□□□□ -0.33
GGA3-207ENST00000578896 NBPF1Q3BBV0 1214 aa13.02□□□□□ -0.33
GGA3-207ENST00000578896 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.33
GGA3-207ENST00000578896 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.33
GGA3-207ENST00000578896 ARHGEF28Q8N1W1 1705 aaKnown RBP13.02□□□□□ -0.33
GGA3-207ENST00000578896 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
GGA3-207ENST00000578896 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
GGA3-207ENST00000578896 CDK19Q9BWU1 502 aa13.01□□□□□ -0.33
GGA3-207ENST00000578896 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
GGA3-207ENST00000578896 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
GGA3-207ENST00000578896 A0A0G2JS52 829 aa13□□□□□ -0.33
GGA3-207ENST00000578896 MYT1Q01538 1121 aa13□□□□□ -0.33
GGA3-207ENST00000578896 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
GGA3-207ENST00000578896 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms