RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 SALL2Q9Y467 1007 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC8-206ENST00000578886 ATP6V1AP38606 617 aa10.16□□□□□ -0.78
TRAPPC8-206ENST00000578886 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
TRAPPC8-206ENST00000578886 RDH13Q8NBN7 331 aa10.16□□□□□ -0.78
TRAPPC8-206ENST00000578886 SLC27A5Q9Y2P5 690 aa10.16□□□□□ -0.78
TRAPPC8-206ENST00000578886 J3QL48 77 aa10.14□□□□□ -0.79
TRAPPC8-206ENST00000578886 TRIM32Q13049 653 aa10.14□□□□□ -0.79
TRAPPC8-206ENST00000578886 SLC16A10Q8TF71 515 aa10.14□□□□□ -0.79
TRAPPC8-206ENST00000578886 MRGPRX2Q96LB1 330 aa10.13□□□□□ -0.79
TRAPPC8-206ENST00000578886 BRICD5Q6PL45 260 aa10.12□□□□□ -0.79
TRAPPC8-206ENST00000578886 REPIN1Q9BWE0 567 aaKnown RBP10.12□□□□□ -0.79
TRAPPC8-206ENST00000578886 ZSCAN1Q8NBB4 408 aa10.11□□□□□ -0.79
TRAPPC8-206ENST00000578886 HPS1Q92902 700 aa10.11□□□□□ -0.79
TRAPPC8-206ENST00000578886 DAXXQ9UER7 740 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC8-206ENST00000578886 FECHP22830 423 aa10.09□□□□□ -0.79
TRAPPC8-206ENST00000578886 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
TRAPPC8-206ENST00000578886 DDX11L8A8MPP1 907 aa10.08□□□□□ -0.8
TRAPPC8-206ENST00000578886 HIC1Q14526 733 aa10.08□□□□□ -0.8
TRAPPC8-206ENST00000578886 RNF19BQ6ZMZ0 732 aa10.08□□□□□ -0.8
TRAPPC8-206ENST00000578886 P3H3Q8IVL6 736 aa10.08□□□□□ -0.8
TRAPPC8-206ENST00000578886 VSIG10Q8N0Z9 540 aa10.08□□□□□ -0.8
TRAPPC8-206ENST00000578886 GMPRP36959 345 aa10.07□□□□□ -0.8
TRAPPC8-206ENST00000578886 GCGRP47871 477 aa10.07□□□□□ -0.8
TRAPPC8-206ENST00000578886 NPAS3Q8IXF0 933 aa10.07□□□□□ -0.8
TRAPPC8-206ENST00000578886 IRF7Q92985 503 aa10.07□□□□□ -0.8
TRAPPC8-206ENST00000578886 LORP23490 312 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC8-206ENST00000578886 MMP16P51512 607 aa10.05□□□□□ -0.8
TRAPPC8-206ENST00000578886 SULF1Q8IWU6 871 aa10.05□□□□□ -0.8
TRAPPC8-206ENST00000578886 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
TRAPPC8-206ENST00000578886 SEMA3EO15041 775 aa10.02□□□□□ -0.81
TRAPPC8-206ENST00000578886 Q3C1V9 767 aa10.02□□□□□ -0.81
TRAPPC8-206ENST00000578886 RC3H1Q5TC82 1133 aaKnown RBP10.01□□□□□ -0.81
TRAPPC8-206ENST00000578886 WNT7BP56706 349 aa10□□□□□ -0.81
TRAPPC8-206ENST00000578886 H3BM21 787 aa9.99□□□□□ -0.81
TRAPPC8-206ENST00000578886 DXOO77932 396 aaKnown RBP9.99□□□□□ -0.81
TRAPPC8-206ENST00000578886 SKOR1P84550 965 aa9.98□□□□□ -0.81
TRAPPC8-206ENST00000578886 GNPATO15228 680 aa9.97□□□□□ -0.81
TRAPPC8-206ENST00000578886 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
TRAPPC8-206ENST00000578886 BMP1P13497 986 aa9.97□□□□□ -0.81
TRAPPC8-206ENST00000578886 NLRP7Q8WX94 980 aa9.97□□□□□ -0.81
TRAPPC8-206ENST00000578886 TRIM46Q7Z4K8 759 aa9.96□□□□□ -0.82
TRAPPC8-206ENST00000578886 USB1Q9BQ65 265 aaKnown RBP9.96□□□□□ -0.82
TRAPPC8-206ENST00000578886 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC8-206ENST00000578886 VEGFBP49765 207 aa9.95□□□□□ -0.82
TRAPPC8-206ENST00000578886 SUZ12Q15022 739 aaKnown RBP9.95□□□□□ -0.82
TRAPPC8-206ENST00000578886 ERBB4Q15303 1308 aa9.94□□□□□ -0.82
TRAPPC8-206ENST00000578886 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
TRAPPC8-206ENST00000578886 CAPN5O15484 640 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC8-206ENST00000578886 GPR37O15354 613 aa9.9□□□□□ -0.82
TRAPPC8-206ENST00000578886 PHOX2BQ99453 314 aa9.9□□□□□ -0.82
TRAPPC8-206ENST00000578886 WASF2Q9Y6W5 498 aa9.9□□□□□ -0.82
TRAPPC8-206ENST00000578886 RBM26Q5T8P6 1007 aaKnown RBP9.89□□□□□ -0.83
TRAPPC8-206ENST00000578886 SIAH2O43255 324 aa9.88□□□□□ -0.83
TRAPPC8-206ENST00000578886 EHBP1Q8NDI1 1231 aa9.87□□□□□ -0.83
TRAPPC8-206ENST00000578886 CD46P15529 392 aa9.86□□□□□ -0.83
TRAPPC8-206ENST00000578886 KDM4AO75164 1064 aa9.85□□□□□ -0.83
TRAPPC8-206ENST00000578886 ZFP42Q96MM3 310 aa9.85□□□□□ -0.83
TRAPPC8-206ENST00000578886 VSIG8P0DPA2 414 aa9.84□□□□□ -0.83
TRAPPC8-206ENST00000578886 JUNDP17535 347 aa9.83□□□□□ -0.84
TRAPPC8-206ENST00000578886 KCNMA1Q12791 1236 aa9.83□□□□□ -0.84
TRAPPC8-206ENST00000578886 SMYD5Q6GMV2 418 aa9.83□□□□□ -0.84
TRAPPC8-206ENST00000578886 USP46P62068 366 aa9.82□□□□□ -0.84
TRAPPC8-206ENST00000578886 KCTD17Q8N5Z5 321 aa9.8□□□□□ -0.84
TRAPPC8-206ENST00000578886 HLA-CQ95604 372 aa9.8□□□□□ -0.84
TRAPPC8-206ENST00000578886 NUDT12Q9BQG2 462 aa9.8□□□□□ -0.84
TRAPPC8-206ENST00000578886 HOXA2O43364 376 aa9.79□□□□□ -0.84
TRAPPC8-206ENST00000578886 GSK3AP49840 483 aa9.78□□□□□ -0.84
TRAPPC8-206ENST00000578886 SH3BP2P78314 561 aa9.77□□□□□ -0.85
TRAPPC8-206ENST00000578886 SCARF1Q14162 830 aa9.77□□□□□ -0.85
TRAPPC8-206ENST00000578886 PTCRAQ6ISU1 281 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC8-206ENST00000578886 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.85
TRAPPC8-206ENST00000578886 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
TRAPPC8-206ENST00000578886 TLL2Q9Y6L7 1015 aa9.75□□□□□ -0.85
TRAPPC8-206ENST00000578886 RETREG3Q86VR2 466 aa9.74□□□□□ -0.85
TRAPPC8-206ENST00000578886 PURBQ96QR8 312 aaKnown RBP9.74□□□□□ -0.85
TRAPPC8-206ENST00000578886 NNTQ13423 1086 aa9.73□□□□□ -0.85
TRAPPC8-206ENST00000578886 TMEM151AQ8N4L1 468 aa9.73□□□□□ -0.85
TRAPPC8-206ENST00000578886 PLEKHG3A1L390 1219 aa9.72□□□□□ -0.85
TRAPPC8-206ENST00000578886 SOBPA7XYQ1 873 aa9.72□□□□□ -0.85
TRAPPC8-206ENST00000578886 GUCA2AQ02747 115 aa9.72□□□□□ -0.85
TRAPPC8-206ENST00000578886 GPIHBP1Q8IV16 184 aa9.72□□□□□ -0.85
TRAPPC8-206ENST00000578886 SYMPKQ92797 1274 aaKnown RBP9.72□□□□□ -0.85
TRAPPC8-206ENST00000578886 RNF225M0QZC1 329 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC8-206ENST00000578886 ADH1CP00326 375 aa9.71□□□□□ -0.86
TRAPPC8-206ENST00000578886 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
TRAPPC8-206ENST00000578886 MPNDQ8N594 471 aa9.71□□□□□ -0.86
TRAPPC8-206ENST00000578886 TIMP2P16035 220 aa9.7□□□□□ -0.86
TRAPPC8-206ENST00000578886 GDF11O95390 407 aa9.69□□□□□ -0.86
TRAPPC8-206ENST00000578886 WDR4P57081 412 aaKnown RBP9.69□□□□□ -0.86
TRAPPC8-206ENST00000578886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRAPPC8-206ENST00000578886 MS4A1P11836 297 aa9.68□□□□□ -0.86
TRAPPC8-206ENST00000578886 VARSP26640 1264 aaKnown RBP9.68□□□□□ -0.86
TRAPPC8-206ENST00000578886 RASSF7Q02833 373 aa9.68□□□□□ -0.86
TRAPPC8-206ENST00000578886 UNC93B1Q9H1C4 597 aa9.68□□□□□ -0.86
TRAPPC8-206ENST00000578886 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
TRAPPC8-206ENST00000578886 MAN1A2O60476 641 aa9.66□□□□□ -0.86
TRAPPC8-206ENST00000578886 MDM2Q00987 491 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC8-206ENST00000578886 PTPRNQ16849 979 aa9.66□□□□□ -0.86
TRAPPC8-206ENST00000578886 MAP2K5Q13163 448 aa9.65□□□□□ -0.86
TRAPPC8-206ENST00000578886 ZNF511Q8NB15 262 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms