RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 PRAM1Q96QH2 718 aa33.95■■■■□ 3.03
ERBB2-209ENST00000578709 PIP4K2BP78356 416 aa33.94■■■■□ 3.02
ERBB2-209ENST00000578709 ARHGEF28Q8N1W1 1705 aaKnown RBP33.93■■■■□ 3.02
ERBB2-209ENST00000578709 SLAIN2Q9P270 581 aa33.93■■■■□ 3.02
ERBB2-209ENST00000578709 ROCK2O75116 1388 aaKnown RBP33.92■■■■□ 3.02
ERBB2-209ENST00000578709 RALGAPBQ86X10 1494 aa33.91■■■■□ 3.02
ERBB2-209ENST00000578709 GPRASP1Q5JY77 1395 aa33.91■■■■□ 3.02
ERBB2-209ENST00000578709 CDC42BPGQ6DT37 1551 aa33.9■■■■□ 3.02
ERBB2-209ENST00000578709 POGKQ9P215 609 aa33.9■■■■□ 3.02
ERBB2-209ENST00000578709 SCAF1Q9H7N4 1312 aaKnown RBP33.89■■■■□ 3.02
ERBB2-209ENST00000578709 MST1RQ04912 1400 aa33.87■■■■□ 3.01
ERBB2-209ENST00000578709 SAFB2Q14151 953 aaKnown RBP eCLIP33.85■■■■□ 3.01
ERBB2-209ENST00000578709 ROBO1Q9Y6N7 1651 aa33.83■■■■□ 3.01
ERBB2-209ENST00000578709 ADGRB2O60241 1585 aa33.82■■■■□ 3
ERBB2-209ENST00000578709 C1orf167Q5SNV9 1468 aa33.79■■■■□ 3
ERBB2-209ENST00000578709 FMN2Q9NZ56 1722 aa33.77■■■■□ 3
ERBB2-209ENST00000578709 CARD11Q9BXL7 1154 aa33.77■■■■□ 3
ERBB2-209ENST00000578709 MINK1Q8N4C8 1332 aaPredicted RBP33.76■■■□□ 2.99
ERBB2-209ENST00000578709 CENPJQ9HC77 1338 aaPredicted RBP33.76■■■□□ 2.99
ERBB2-209ENST00000578709 BRINP3Q76B58 766 aa33.74■■■□□ 2.99
ERBB2-209ENST00000578709 EIF3AQ14152 1382 aaKnown RBP33.73■■■□□ 2.99
ERBB2-209ENST00000578709 HSPA1LP34931 641 aa33.72■■■□□ 2.99
ERBB2-209ENST00000578709 HIRIP3Q9BW71 556 aaPredicted RBP33.72■■■□□ 2.99
ERBB2-209ENST00000578709 QRICH2Q9H0J4 1663 aa33.69■■■□□ 2.98
ERBB2-209ENST00000578709 WASLO00401 505 aaPredicted RBP33.68■■■□□ 2.98
ERBB2-209ENST00000578709 AHDC1Q5TGY3 1603 aaPredicted RBP33.65■■■□□ 2.98
ERBB2-209ENST00000578709 ANKARQ7Z5J8 1434 aa33.65■■■□□ 2.98
ERBB2-209ENST00000578709 ORAI2Q96SN7 254 aa33.65■■■□□ 2.98
ERBB2-209ENST00000578709 NUTM2FA1L443 756 aa33.64■■■□□ 2.98
ERBB2-209ENST00000578709 TULP4Q9NRJ4 1543 aa33.63■■■□□ 2.97
ERBB2-209ENST00000578709 USP32Q8NFA0 1604 aa33.62■■■□□ 2.97
ERBB2-209ENST00000578709 NHSL1Q5SYE7 1610 aa33.61■■■□□ 2.97
ERBB2-209ENST00000578709 ESCO1Q5FWF5 840 aa33.61■■■□□ 2.97
ERBB2-209ENST00000578709 RGPD8O14715 1765 aaPredicted RBP33.6■■■□□ 2.97
ERBB2-209ENST00000578709 PHLPP1O60346 1717 aa33.6■■■□□ 2.97
ERBB2-209ENST00000578709 SBNO2Q9Y2G9 1366 aa33.6■■■□□ 2.97
ERBB2-209ENST00000578709 CDK19Q9BWU1 502 aa33.58■■■□□ 2.97
ERBB2-209ENST00000578709 PRR36Q9H6K5 1346 aa33.57■■■□□ 2.97
ERBB2-209ENST00000578709 COL16A1Q07092 1604 aaPredicted RBP33.57■■■□□ 2.96
ERBB2-209ENST00000578709 KIF1AQ12756 1690 aa33.55■■■□□ 2.96
ERBB2-209ENST00000578709 USP47Q96K76 1375 aa33.54■■■□□ 2.96
ERBB2-209ENST00000578709 ATP7BP35670 1465 aa33.54■■■□□ 2.96
ERBB2-209ENST00000578709 EVC2Q86UK5 1308 aa33.52■■■□□ 2.96
ERBB2-209ENST00000578709 DDX17Q92841 729 aaKnown RBP33.51■■■□□ 2.95
ERBB2-209ENST00000578709 NUDT16Q96DE0 195 aaKnown RBP33.51■■■□□ 2.95
ERBB2-209ENST00000578709 PHF8Q9UPP1 1060 aa33.51■■■□□ 2.95
ERBB2-209ENST00000578709 ST20-MTHFSA0A0A6YYL1 179 aa33.49■■■□□ 2.95
ERBB2-209ENST00000578709 NPHP3Q7Z494 1330 aa33.49■■■□□ 2.95
ERBB2-209ENST00000578709 ITSN1Q15811 1721 aa33.48■■■□□ 2.95
ERBB2-209ENST00000578709 SOS2Q07890 1332 aaPredicted RBP33.48■■■□□ 2.95
ERBB2-209ENST00000578709 FOXO3O43524 673 aa33.47■■■□□ 2.95
ERBB2-209ENST00000578709 SRPK2P78362 688 aaKnown RBP33.47■■■□□ 2.95
ERBB2-209ENST00000578709 TESK2Q96S53 571 aa33.47■■■□□ 2.95
ERBB2-209ENST00000578709 TOPAZ1Q8N9V7 1692 aa33.46■■■□□ 2.95
ERBB2-209ENST00000578709 CABP2Q9NPB3 220 aa33.45■■■□□ 2.95
ERBB2-209ENST00000578709 PXDNQ92626 1479 aa33.44■■■□□ 2.94
ERBB2-209ENST00000578709 CCDC61Q9Y6R9 512 aa33.44■■■□□ 2.94
ERBB2-209ENST00000578709 JCADQ9P266 1359 aa33.42■■■□□ 2.94
ERBB2-209ENST00000578709 SLC24A1O60721 1099 aa33.41■■■□□ 2.94
ERBB2-209ENST00000578709 PMFBP1Q8TBY8 1022 aa33.41■■■□□ 2.94
ERBB2-209ENST00000578709 LRRC59Q96AG4 307 aaKnown RBP33.41■■■□□ 2.94
ERBB2-209ENST00000578709 PLEKHG3A1L390 1219 aa33.38■■■□□ 2.93
ERBB2-209ENST00000578709 SHPRHQ149N8 1683 aa33.37■■■□□ 2.93
ERBB2-209ENST00000578709 XPCQ01831 940 aaPredicted RBP33.36■■■□□ 2.93
ERBB2-209ENST00000578709 PPIP5K1Q6PFW1 1433 aa33.36■■■□□ 2.93
ERBB2-209ENST00000578709 POLR3AO14802 1390 aaPredicted RBP33.35■■■□□ 2.93
ERBB2-209ENST00000578709 ATAD2Q6PL18 1390 aa33.35■■■□□ 2.93
ERBB2-209ENST00000578709 KRT28Q7Z3Y7 464 aa33.35■■■□□ 2.93
ERBB2-209ENST00000578709 PUS7Q96PZ0 661 aaKnown RBP33.35■■■□□ 2.93
ERBB2-209ENST00000578709 EIF4G2P78344 907 aaKnown RBP eCLIP33.33■■■□□ 2.93
ERBB2-209ENST00000578709 PSME1Q06323 249 aa33.33■■■□□ 2.93
ERBB2-209ENST00000578709 NGDNQ8NEJ9 315 aaKnown RBP33.33■■■□□ 2.93
ERBB2-209ENST00000578709 PNPLA6Q8IY17 1366 aa33.31■■■□□ 2.92
ERBB2-209ENST00000578709 ACEP12821 1306 aa33.3■■■□□ 2.92
ERBB2-209ENST00000578709 SBNO1A3KN83 1393 aa33.3■■■□□ 2.92
ERBB2-209ENST00000578709 CABP1Q9NZU7 370 aa33.29■■■□□ 2.92
ERBB2-209ENST00000578709 TRPM3Q9HCF6 1732 aaPredicted RBP33.28■■■□□ 2.92
ERBB2-209ENST00000578709 HSPA5P11021 654 aaKnown RBP33.28■■■□□ 2.92
ERBB2-209ENST00000578709 TMF1P82094 1093 aa33.28■■■□□ 2.92
ERBB2-209ENST00000578709 DISP3Q9P2K9 1392 aa33.28■■■□□ 2.92
ERBB2-209ENST00000578709 SPATA31A6Q5VVP1 1343 aa33.28■■■□□ 2.92
ERBB2-209ENST00000578709 SPATA31A3Q5VYP0 1347 aa33.28■■■□□ 2.92
ERBB2-209ENST00000578709 TNS3Q68CZ2 1445 aa33.26■■■□□ 2.91
ERBB2-209ENST00000578709 COL22A1Q8NFW1 1626 aaPredicted RBP33.24■■■□□ 2.91
ERBB2-209ENST00000578709 MED1Q15648 1581 aaPredicted RBP33.22■■■□□ 2.91
ERBB2-209ENST00000578709 CDCA8Q53HL2 280 aa33.2■■■□□ 2.91
ERBB2-209ENST00000578709 ALS2Q96Q42 1657 aa33.19■■■□□ 2.9
ERBB2-209ENST00000578709 ARHGEF10O15013 1369 aa33.19■■■□□ 2.9
ERBB2-209ENST00000578709 BRD4O60885 1362 aaPredicted RBP33.18■■■□□ 2.9
ERBB2-209ENST00000578709 NINLQ9Y2I6 1382 aa33.18■■■□□ 2.9
ERBB2-209ENST00000578709 CPSF1Q10570 1443 aaKnown RBP33.18■■■□□ 2.9
ERBB2-209ENST00000578709 AKAP12Q02952 1782 aa33.17■■■□□ 2.9
ERBB2-209ENST00000578709 LRP6O75581 1613 aa33.17■■■□□ 2.9
ERBB2-209ENST00000578709 USP6P35125 1406 aa33.16■■■□□ 2.9
ERBB2-209ENST00000578709 ZNF692Q9BU19 519 aaPredicted RBP33.15■■■□□ 2.9
ERBB2-209ENST00000578709 CD163L1Q9NR16 1453 aa33.14■■■□□ 2.9
ERBB2-209ENST00000578709 TMC1Q8TDI8 760 aa33.14■■■□□ 2.9
ERBB2-209ENST00000578709 SLC12A5Q9H2X9 1139 aa33.14■■■□□ 2.9
ERBB2-209ENST00000578709 SSH2Q76I76 1423 aa33.12■■■□□ 2.89
ERBB2-209ENST00000578709 PAK3O75914 559 aaPredicted RBP33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms