RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 C9orf78Q9NZ63 289 aaPredicted RBP14.75□□□□□ -0.05
ERBB2-206ENST00000578373 FAM43AQ8N2R8 423 aa14.75□□□□□ -0.05
ERBB2-206ENST00000578373 ARHGEF11O15085 1522 aa14.75□□□□□ -0.05
ERBB2-206ENST00000578373 NEK4P51957 841 aa14.75□□□□□ -0.05
ERBB2-206ENST00000578373 FOSBP53539 338 aa14.75□□□□□ -0.05
ERBB2-206ENST00000578373 MVPQ14764 893 aaKnown RBP14.75□□□□□ -0.05
ERBB2-206ENST00000578373 GPATCH3Q96I76 525 aa14.75□□□□□ -0.05
ERBB2-206ENST00000578373 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
ERBB2-206ENST00000578373 INTS3Q68E01 1043 aaKnown RBP14.74□□□□□ -0.05
ERBB2-206ENST00000578373 SUPT6HQ7KZ85 1726 aaKnown RBP14.74□□□□□ -0.05
ERBB2-206ENST00000578373 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
ERBB2-206ENST00000578373 TXNDC2Q86VQ3 553 aa14.74□□□□□ -0.05
ERBB2-206ENST00000578373 CDC45O75419 566 aa14.74□□□□□ -0.05
ERBB2-206ENST00000578373 TMEM57Q8N5G2 664 aa14.74□□□□□ -0.05
ERBB2-206ENST00000578373 IGHDP01880 384 aa14.73□□□□□ -0.05
ERBB2-206ENST00000578373 PRPF40AO75400 957 aaKnown RBP14.73□□□□□ -0.05
ERBB2-206ENST00000578373 NASPP49321 788 aaPredicted RBP14.73□□□□□ -0.05
ERBB2-206ENST00000578373 RRS1Q15050 365 aaKnown RBP14.73□□□□□ -0.05
ERBB2-206ENST00000578373 FBXW7Q969H0 707 aa14.73□□□□□ -0.05
ERBB2-206ENST00000578373 MRE11P49959 708 aa14.72□□□□□ -0.05
ERBB2-206ENST00000578373 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
ERBB2-206ENST00000578373 FBLN1P23142 703 aa14.72□□□□□ -0.05
ERBB2-206ENST00000578373 AIMP1Q12904 312 aaKnown RBP14.72□□□□□ -0.05
ERBB2-206ENST00000578373 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
ERBB2-206ENST00000578373 TAF7LQ5H9L4 462 aa14.72□□□□□ -0.05
ERBB2-206ENST00000578373 SULT6B1Q6IMI4 303 aa14.72□□□□□ -0.05
ERBB2-206ENST00000578373 SSH1Q8WYL5 1049 aa14.72□□□□□ -0.05
ERBB2-206ENST00000578373 STAC3Q96MF2 364 aa14.72□□□□□ -0.05
ERBB2-206ENST00000578373 RARSP54136 660 aaKnown RBP14.71□□□□□ -0.05
ERBB2-206ENST00000578373 RPRD2Q5VT52 1461 aaKnown RBP14.71□□□□□ -0.05
ERBB2-206ENST00000578373 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
ERBB2-206ENST00000578373 CCDC27Q2M243 656 aa14.71□□□□□ -0.05
ERBB2-206ENST00000578373 TOMM22Q9NS69 142 aa14.71□□□□□ -0.05
ERBB2-206ENST00000578373 ROCK1Q13464 1354 aa14.71□□□□□ -0.05
ERBB2-206ENST00000578373 SNAPC4Q5SXM2 1469 aa14.71□□□□□ -0.05
ERBB2-206ENST00000578373 CREBRFQ8IUR6 639 aa14.71□□□□□ -0.05
ERBB2-206ENST00000578373 DISP3Q9P2K9 1392 aa14.71□□□□□ -0.06
ERBB2-206ENST00000578373 MCM4P33991 863 aa14.71□□□□□ -0.06
ERBB2-206ENST00000578373 R3HCC1Q9Y3T6 440 aaKnown RBP14.7□□□□□ -0.06
ERBB2-206ENST00000578373 H3BQV1 296 aa14.7□□□□□ -0.06
ERBB2-206ENST00000578373 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
ERBB2-206ENST00000578373 NUCB2P80303 420 aa14.7□□□□□ -0.06
ERBB2-206ENST00000578373 SF3A1Q15459 793 aaKnown RBP14.7□□□□□ -0.06
ERBB2-206ENST00000578373 IFFO2Q5TF58 517 aa14.7□□□□□ -0.06
ERBB2-206ENST00000578373 CDK19Q9BWU1 502 aa14.7□□□□□ -0.06
ERBB2-206ENST00000578373 MIS18AQ9NYP9 233 aa14.7□□□□□ -0.06
ERBB2-206ENST00000578373 ADGRF5Q8IZF2 1346 aa14.7□□□□□ -0.06
ERBB2-206ENST00000578373 ABCA10Q8WWZ4 1543 aa14.7□□□□□ -0.06
ERBB2-206ENST00000578373 TMPOP42166 694 aaKnown RBP14.69□□□□□ -0.06
ERBB2-206ENST00000578373 ISY1Q9ULR0 285 aaKnown RBP14.69□□□□□ -0.06
ERBB2-206ENST00000578373 PHF14O94880 888 aa14.69□□□□□ -0.06
ERBB2-206ENST00000578373 NLRP6P59044 892 aa14.69□□□□□ -0.06
ERBB2-206ENST00000578373 ZNF592Q92610 1267 aa14.69□□□□□ -0.06
ERBB2-206ENST00000578373 SURF6O75683 361 aaKnown RBP14.69□□□□□ -0.06
ERBB2-206ENST00000578373 IFIT2P09913 472 aaKnown RBP14.68□□□□□ -0.06
ERBB2-206ENST00000578373 WDR63Q8IWG1 891 aa14.68□□□□□ -0.06
ERBB2-206ENST00000578373 TNNQ9UQP3 1299 aa14.68□□□□□ -0.06
ERBB2-206ENST00000578373 FAM69CQ0P6D2 419 aa14.68□□□□□ -0.06
ERBB2-206ENST00000578373 NSD3Q9BZ95 1437 aa14.68□□□□□ -0.06
ERBB2-206ENST00000578373 MAP4K4O95819 1239 aaPredicted RBP14.68□□□□□ -0.06
ERBB2-206ENST00000578373 CHD1LQ86WJ1 897 aa14.68□□□□□ -0.06
ERBB2-206ENST00000578373 FAM184AQ8NB25 1140 aa14.68□□□□□ -0.06
ERBB2-206ENST00000578373 TBC1D2Q9BYX2 928 aa14.66□□□□□ -0.06
ERBB2-206ENST00000578373 SMC3Q9UQE7 1217 aa14.66□□□□□ -0.06
ERBB2-206ENST00000578373 HECW1Q76N89 1606 aa14.66□□□□□ -0.06
ERBB2-206ENST00000578373 C1orf141Q5JVX7 400 aa14.66□□□□□ -0.06
ERBB2-206ENST00000578373 CAMSAP2Q08AD1 1489 aa14.66□□□□□ -0.06
ERBB2-206ENST00000578373 HTATSF1O43719 755 aaKnown RBP14.66□□□□□ -0.06
ERBB2-206ENST00000578373 ZKSCAN1P17029 563 aaPredicted RBP14.66□□□□□ -0.06
ERBB2-206ENST00000578373 RBM10P98175 930 aaKnown RBP14.66□□□□□ -0.06
ERBB2-206ENST00000578373 DNMBPQ6XZF7 1577 aa14.65□□□□□ -0.06
ERBB2-206ENST00000578373 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
ERBB2-206ENST00000578373 AAMPQ13685 434 aa14.65□□□□□ -0.06
ERBB2-206ENST00000578373 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
ERBB2-206ENST00000578373 WAPLQ7Z5K2 1190 aa14.65□□□□□ -0.06
ERBB2-206ENST00000578373 BICD2Q8TD16 824 aa14.65□□□□□ -0.06
ERBB2-206ENST00000578373 BECN2A8MW95 431 aa14.64□□□□□ -0.07
ERBB2-206ENST00000578373 MAP3K1Q13233 1512 aa14.64□□□□□ -0.07
ERBB2-206ENST00000578373 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
ERBB2-206ENST00000578373 SMARCA5O60264 1052 aaPredicted RBP14.64□□□□□ -0.07
ERBB2-206ENST00000578373 FIBPO43427 364 aa14.64□□□□□ -0.07
ERBB2-206ENST00000578373 CSPP1Q1MSJ5 1256 aa14.64□□□□□ -0.07
ERBB2-206ENST00000578373 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
ERBB2-206ENST00000578373 ATP6V1DQ9Y5K8 247 aa14.64□□□□□ -0.07
ERBB2-206ENST00000578373 GRPEL1Q9HAV7 217 aa14.63□□□□□ -0.07
ERBB2-206ENST00000578373 PCDHB15Q9Y5E8 787 aa14.63□□□□□ -0.07
ERBB2-206ENST00000578373 EXOC6BQ9Y2D4 811 aa14.63□□□□□ -0.07
ERBB2-206ENST00000578373 KDM4AO75164 1064 aa14.63□□□□□ -0.07
ERBB2-206ENST00000578373 HDAC5Q9UQL6 1122 aa14.63□□□□□ -0.07
ERBB2-206ENST00000578373 GOLGA6L19H0YKK7 550 aa14.62□□□□□ -0.07
ERBB2-206ENST00000578373 TRIM27P14373 513 aa14.62□□□□□ -0.07
ERBB2-206ENST00000578373 CHMP4AQ9BY43 222 aa14.62□□□□□ -0.07
ERBB2-206ENST00000578373 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
ERBB2-206ENST00000578373 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
ERBB2-206ENST00000578373 K7ELQ4 463 aaPredicted RBP14.62□□□□□ -0.07
ERBB2-206ENST00000578373 PSME1Q06323 249 aa14.62□□□□□ -0.07
ERBB2-206ENST00000578373 G3BP1Q13283 466 aaKnown RBP eCLIP14.62□□□□□ -0.07
ERBB2-206ENST00000578373 GCC1Q96CN9 775 aa14.62□□□□□ -0.07
ERBB2-206ENST00000578373 KIAA0586Q9BVV6 1533 aa14.62□□□□□ -0.07
ERBB2-206ENST00000578373 MCM10Q7L590 875 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms