RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 RGS12O14924 1447 aa6.76□□□□□ -1.33
PPP4R1-209ENST00000578329 LRPPRCP42704 1394 aaKnown RBP6.75□□□□□ -1.33
PPP4R1-209ENST00000578329 ABCC11Q96J66 1382 aa6.75□□□□□ -1.33
PPP4R1-209ENST00000578329 VGFO15240 615 aaPredicted RBP6.75□□□□□ -1.33
PPP4R1-209ENST00000578329 UPF1Q92900 1129 aaKnown RBP eCLIP6.75□□□□□ -1.33
PPP4R1-209ENST00000578329 FMN2Q9NZ56 1722 aa6.75□□□□□ -1.33
PPP4R1-209ENST00000578329 AFF2P51816 1311 aa6.75□□□□□ -1.33
PPP4R1-209ENST00000578329 RGPD8O14715 1765 aaPredicted RBP6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 BCL9LQ86UU0 1499 aa6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 CDK12Q9NYV4 1490 aaPredicted RBP6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 ANKRD30BQ9BXX2 1392 aa6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 NUTM2BA6NNL0 878 aaPredicted RBP6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 NUTM2EB1AL46 878 aaPredicted RBP6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 RGL3Q3MIN7 710 aa6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 NUTM2AQ8IVF1 878 aaPredicted RBP6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 YTHDC2Q9H6S0 1430 aaKnown RBP6.74□□□□□ -1.33
PPP4R1-209ENST00000578329 DHX57Q6P158 1386 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-209ENST00000578329 RAB3GAP2Q9H2M9 1393 aa6.73□□□□□ -1.33
PPP4R1-209ENST00000578329 XPCQ01831 940 aaPredicted RBP6.73□□□□□ -1.33
PPP4R1-209ENST00000578329 CFAP70Q5T0N1 1121 aa6.73□□□□□ -1.33
PPP4R1-209ENST00000578329 LRRC59Q96AG4 307 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-209ENST00000578329 C14orf93Q9H972 538 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-209ENST00000578329 CCDC144AA2RUR9 1427 aa6.73□□□□□ -1.33
PPP4R1-209ENST00000578329 FNBP4Q8N3X1 1017 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-209ENST00000578329 STK26Q9P289 416 aa6.72□□□□□ -1.33
PPP4R1-209ENST00000578329 ATRNO75882 1429 aa6.72□□□□□ -1.33
PPP4R1-209ENST00000578329 MARF1Q9Y4F3 1742 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 GLI3P10071 1580 aa6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 EP400Q96L91 3159 aa6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 NUTM2FA1L443 756 aa6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 FOXO3O43524 673 aa6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 ADAMTS2O95450 1211 aa6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 ZNF772Q68DY9 489 aaPredicted RBP6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 C8orf37Q96NL8 207 aa6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 PRR36Q9H6K5 1346 aa6.71□□□□□ -1.34
PPP4R1-209ENST00000578329 ABCA3Q99758 1704 aa6.7□□□□□ -1.34
PPP4R1-209ENST00000578329 RXRBP28702 533 aa6.7□□□□□ -1.34
PPP4R1-209ENST00000578329 SIRT1Q96EB6 747 aa6.7□□□□□ -1.34
PPP4R1-209ENST00000578329 QTRT2Q9H974 415 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-209ENST00000578329 SLIT2O94813 1529 aa6.7□□□□□ -1.34
PPP4R1-209ENST00000578329 DLC1Q96QB1 1528 aa6.7□□□□□ -1.34
PPP4R1-209ENST00000578329 TRPM3Q9HCF6 1732 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-209ENST00000578329 ADGRB2O60241 1585 aa6.69□□□□□ -1.34
PPP4R1-209ENST00000578329 CRYBG1Q9Y4K1 1723 aa6.69□□□□□ -1.34
PPP4R1-209ENST00000578329 SPATA31A3Q5VYP0 1347 aa6.69□□□□□ -1.34
PPP4R1-209ENST00000578329 SRCAPQ6ZRS2 3230 aa6.68□□□□□ -1.34
PPP4R1-209ENST00000578329 RBM6P78332 1123 aaKnown RBP6.68□□□□□ -1.34
PPP4R1-209ENST00000578329 ESCO1Q5FWF5 840 aa6.68□□□□□ -1.34
PPP4R1-209ENST00000578329 MEX3CQ5U5Q3 659 aaKnown RBP6.68□□□□□ -1.34
PPP4R1-209ENST00000578329 ALS2Q96Q42 1657 aa6.68□□□□□ -1.34
PPP4R1-209ENST00000578329 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.67□□□□□ -1.34
PPP4R1-209ENST00000578329 CABLES1Q8TDN4 633 aa6.67□□□□□ -1.34
PPP4R1-209ENST00000578329 NGLY1Q96IV0 654 aa6.67□□□□□ -1.34
PPP4R1-209ENST00000578329 PRAM1Q96QH2 718 aa6.67□□□□□ -1.34
PPP4R1-209ENST00000578329 NPHP3Q7Z494 1330 aa6.67□□□□□ -1.34
PPP4R1-209ENST00000578329 KIF1AQ12756 1690 aa6.67□□□□□ -1.34
PPP4R1-209ENST00000578329 ARHGEF28Q8N1W1 1705 aaKnown RBP6.67□□□□□ -1.34
PPP4R1-209ENST00000578329 BRWD3Q6RI45 1802 aa6.66□□□□□ -1.34
PPP4R1-209ENST00000578329 RALGAPBQ86X10 1494 aa6.66□□□□□ -1.34
PPP4R1-209ENST00000578329 SAFB2Q14151 953 aaKnown RBP eCLIP6.66□□□□□ -1.34
PPP4R1-209ENST00000578329 USP21Q9UK80 565 aa6.66□□□□□ -1.34
PPP4R1-209ENST00000578329 NRAPQ86VF7 1730 aa6.66□□□□□ -1.34
PPP4R1-209ENST00000578329 TNS3Q68CZ2 1445 aa6.66□□□□□ -1.34
PPP4R1-209ENST00000578329 PLCH1Q4KWH8 1693 aa6.65□□□□□ -1.34
PPP4R1-209ENST00000578329 KRT28Q7Z3Y7 464 aa6.65□□□□□ -1.34
PPP4R1-209ENST00000578329 PHF8Q9UPP1 1060 aa6.65□□□□□ -1.34
PPP4R1-209ENST00000578329 ATP7BP35670 1465 aa6.65□□□□□ -1.35
PPP4R1-209ENST00000578329 FAM83GA6ND36 823 aa6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 NBPF1Q3BBV0 1214 aa6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 GJD4Q96KN9 370 aaPredicted RBP6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 HIRIP3Q9BW71 556 aaPredicted RBP6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 TRPC5Q9UL62 973 aaPredicted RBP6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 TRAK1Q9UPV9 953 aa6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 SBNO1A3KN83 1393 aa6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 ANKARQ7Z5J8 1434 aa6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 TULP4Q9NRJ4 1543 aa6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 TOPAZ1Q8N9V7 1692 aa6.64□□□□□ -1.35
PPP4R1-209ENST00000578329 ONECUT3O60422 494 aaPredicted RBP6.63□□□□□ -1.35
PPP4R1-209ENST00000578329 HRCP23327 699 aa6.63□□□□□ -1.35
PPP4R1-209ENST00000578329 MINK1Q8N4C8 1332 aaPredicted RBP6.63□□□□□ -1.35
PPP4R1-209ENST00000578329 PMFBP1Q8TBY8 1022 aa6.63□□□□□ -1.35
PPP4R1-209ENST00000578329 NWD2Q9ULI1 1742 aa6.62□□□□□ -1.35
PPP4R1-209ENST00000578329 ACIN1Q9UKV3 1341 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-209ENST00000578329 UNC5CLQ8IV45 518 aa6.62□□□□□ -1.35
PPP4R1-209ENST00000578329 DCAF11Q8TEB1 546 aa6.62□□□□□ -1.35
PPP4R1-209ENST00000578329 KDM2AQ9Y2K7 1162 aa6.62□□□□□ -1.35
PPP4R1-209ENST00000578329 WASLO00401 505 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-209ENST00000578329 THSD7AQ9UPZ6 1657 aa6.61□□□□□ -1.35
PPP4R1-209ENST00000578329 KIAA1210Q9ULL0 1709 aa6.6□□□□□ -1.35
PPP4R1-209ENST00000578329 VPS72Q15906 364 aa6.6□□□□□ -1.35
PPP4R1-209ENST00000578329 PHRF1Q9P1Y6 1649 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-209ENST00000578329 POLR3AO14802 1390 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-209ENST00000578329 ATAD2Q6PL18 1390 aa6.59□□□□□ -1.35
PPP4R1-209ENST00000578329 LMO7Q8WWI1 1683 aa6.59□□□□□ -1.35
PPP4R1-209ENST00000578329 PLEKHG5O94827 1062 aa6.59□□□□□ -1.35
PPP4R1-209ENST00000578329 DEFB132Q7Z7B7 95 aa6.59□□□□□ -1.35
PPP4R1-209ENST00000578329 SEPT12Q8IYM1 358 aa6.59□□□□□ -1.35
PPP4R1-209ENST00000578329 COL14A1Q05707 1796 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-209ENST00000578329 SSH2Q76I76 1423 aa6.59□□□□□ -1.36
PPP4R1-209ENST00000578329 CAMTA1Q9Y6Y1 1673 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms