RNA–Protein interactions for RNA: ENST00000578137.5

DDX42-206, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 857 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-206ENST00000578137 BRICD5Q6PL45 260 aa9.7□□□□□ -0.86
DDX42-206ENST00000578137 SNIP1Q8TAD8 396 aaKnown RBP9.7□□□□□ -0.86
DDX42-206ENST00000578137 TRIM47Q96LD4 638 aa9.7□□□□□ -0.86
DDX42-206ENST00000578137 SENP2Q9HC62 589 aa9.7□□□□□ -0.86
DDX42-206ENST00000578137 ZBTB24O43167 697 aaPredicted RBP9.69□□□□□ -0.86
DDX42-206ENST00000578137 SMPD1P17405 629 aa9.69□□□□□ -0.86
DDX42-206ENST00000578137 SLC27A5Q9Y2P5 690 aa9.69□□□□□ -0.86
DDX42-206ENST00000578137 GCGRP47871 477 aa9.67□□□□□ -0.86
DDX42-206ENST00000578137 RDH13Q8NBN7 331 aa9.66□□□□□ -0.86
DDX42-206ENST00000578137 KIFC2Q96AC6 838 aa9.66□□□□□ -0.86
DDX42-206ENST00000578137 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
DDX42-206ENST00000578137 SULF1Q8IWU6 871 aa9.65□□□□□ -0.86
DDX42-206ENST00000578137 TRIM32Q13049 653 aa9.64□□□□□ -0.87
DDX42-206ENST00000578137 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
DDX42-206ENST00000578137 REPIN1Q9BWE0 567 aaKnown RBP9.64□□□□□ -0.87
DDX42-206ENST00000578137 MMP16P51512 607 aa9.63□□□□□ -0.87
DDX42-206ENST00000578137 DDX11L8A8MPP1 907 aa9.62□□□□□ -0.87
DDX42-206ENST00000578137 GRIPAP1Q4V328 841 aa9.62□□□□□ -0.87
DDX42-206ENST00000578137 MRGPRX2Q96LB1 330 aa9.62□□□□□ -0.87
DDX42-206ENST00000578137 J3QL48 77 aa9.61□□□□□ -0.87
DDX42-206ENST00000578137 GNPATO15228 680 aa9.61□□□□□ -0.87
DDX42-206ENST00000578137 LORP23490 312 aaPredicted RBP9.6□□□□□ -0.87
DDX42-206ENST00000578137 RNF19BQ6ZMZ0 732 aa9.6□□□□□ -0.87
DDX42-206ENST00000578137 FAM181BA6NEQ2 426 aa9.59□□□□□ -0.87
DDX42-206ENST00000578137 SEMA3EO15041 775 aa9.59□□□□□ -0.87
DDX42-206ENST00000578137 Q3C1V9 767 aa9.59□□□□□ -0.87
DDX42-206ENST00000578137 FECHP22830 423 aa9.58□□□□□ -0.88
DDX42-206ENST00000578137 HPS1Q92902 700 aa9.58□□□□□ -0.88
DDX42-206ENST00000578137 GPR37O15354 613 aa9.57□□□□□ -0.88
DDX42-206ENST00000578137 GMPRP36959 345 aa9.57□□□□□ -0.88
DDX42-206ENST00000578137 NPAS3Q8IXF0 933 aa9.57□□□□□ -0.88
DDX42-206ENST00000578137 EIF4G1Q04637 1599 aaKnown RBP9.56□□□□□ -0.88
DDX42-206ENST00000578137 DXOO77932 396 aaKnown RBP9.56□□□□□ -0.88
DDX42-206ENST00000578137 AMER1Q5JTC6 1135 aaPredicted RBP9.56□□□□□ -0.88
DDX42-206ENST00000578137 ZSCAN1Q8NBB4 408 aa9.56□□□□□ -0.88
DDX42-206ENST00000578137 SLC16A10Q8TF71 515 aa9.56□□□□□ -0.88
DDX42-206ENST00000578137 TSHZ2Q9NRE2 1034 aa9.56□□□□□ -0.88
DDX42-206ENST00000578137 WNT7BP56706 349 aa9.55□□□□□ -0.88
DDX42-206ENST00000578137 NXF1Q9UBU9 619 aaKnown RBP9.54□□□□□ -0.88
DDX42-206ENST00000578137 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
DDX42-206ENST00000578137 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
DDX42-206ENST00000578137 PHOX2BQ99453 314 aa9.52□□□□□ -0.89
DDX42-206ENST00000578137 USB1Q9BQ65 265 aaKnown RBP9.52□□□□□ -0.89
DDX42-206ENST00000578137 VEGFBP49765 207 aa9.51□□□□□ -0.89
DDX42-206ENST00000578137 RBM26Q5T8P6 1007 aaKnown RBP9.51□□□□□ -0.89
DDX42-206ENST00000578137 RC3H1Q5TC82 1133 aaKnown RBP9.51□□□□□ -0.89
DDX42-206ENST00000578137 SHROOM4Q9ULL8 1493 aa9.51□□□□□ -0.89
DDX42-206ENST00000578137 SUZ12Q15022 739 aaKnown RBP9.5□□□□□ -0.89
DDX42-206ENST00000578137 SKOR1P84550 965 aa9.49□□□□□ -0.89
DDX42-206ENST00000578137 NLRP7Q8WX94 980 aa9.49□□□□□ -0.89
DDX42-206ENST00000578137 IRF7Q92985 503 aa9.49□□□□□ -0.89
DDX42-206ENST00000578137 CD46P15529 392 aa9.48□□□□□ -0.89
DDX42-206ENST00000578137 CUX2O14529 1486 aa9.47□□□□□ -0.89
DDX42-206ENST00000578137 MYO15BQ96JP2 1530 aa9.47□□□□□ -0.89
DDX42-206ENST00000578137 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
DDX42-206ENST00000578137 BMP1P13497 986 aa9.46□□□□□ -0.9
DDX42-206ENST00000578137 USP46P62068 366 aa9.46□□□□□ -0.9
DDX42-206ENST00000578137 H3BM21 787 aa9.45□□□□□ -0.9
DDX42-206ENST00000578137 SIAH2O43255 324 aa9.45□□□□□ -0.9
DDX42-206ENST00000578137 KDM4AO75164 1064 aa9.44□□□□□ -0.9
DDX42-206ENST00000578137 TRIM46Q7Z4K8 759 aa9.44□□□□□ -0.9
DDX42-206ENST00000578137 ALDH1A1P00352 501 aa9.43□□□□□ -0.9
DDX42-206ENST00000578137 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
DDX42-206ENST00000578137 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
DDX42-206ENST00000578137 JUNDP17535 347 aa9.4□□□□□ -0.9
DDX42-206ENST00000578137 HOXA2O43364 376 aa9.39□□□□□ -0.91
DDX42-206ENST00000578137 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
DDX42-206ENST00000578137 EHBP1Q8NDI1 1231 aa9.37□□□□□ -0.91
DDX42-206ENST00000578137 WASF2Q9Y6W5 498 aa9.36□□□□□ -0.91
DDX42-206ENST00000578137 VSIG8P0DPA2 414 aa9.35□□□□□ -0.91
DDX42-206ENST00000578137 KCTD17Q8N5Z5 321 aa9.35□□□□□ -0.91
DDX42-206ENST00000578137 NUDT12Q9BQG2 462 aa9.35□□□□□ -0.91
DDX42-206ENST00000578137 RETREG3Q86VR2 466 aa9.34□□□□□ -0.91
DDX42-206ENST00000578137 GPIHBP1Q8IV16 184 aa9.34□□□□□ -0.91
DDX42-206ENST00000578137 MPNDQ8N594 471 aa9.34□□□□□ -0.91
DDX42-206ENST00000578137 HLA-CQ95604 372 aa9.34□□□□□ -0.91
DDX42-206ENST00000578137 MAP2K5Q13163 448 aa9.33□□□□□ -0.92
DDX42-206ENST00000578137 PTCRAQ6ISU1 281 aaPredicted RBP9.33□□□□□ -0.92
DDX42-206ENST00000578137 ZFP42Q96MM3 310 aa9.33□□□□□ -0.92
DDX42-206ENST00000578137 GSK3AP49840 483 aa9.32□□□□□ -0.92
DDX42-206ENST00000578137 SCRIBQ14160 1630 aa9.31□□□□□ -0.92
DDX42-206ENST00000578137 SH3BP2P78314 561 aa9.31□□□□□ -0.92
DDX42-206ENST00000578137 KCNMA1Q12791 1236 aa9.29□□□□□ -0.92
DDX42-206ENST00000578137 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
DDX42-206ENST00000578137 CCNYL3P0C7X3 344 aa9.28□□□□□ -0.92
DDX42-206ENST00000578137 SOBPA7XYQ1 873 aa9.27□□□□□ -0.93
DDX42-206ENST00000578137 IRF6O14896 467 aa9.27□□□□□ -0.93
DDX42-206ENST00000578137 MRPL14Q6P1L8 145 aaKnown RBP9.27□□□□□ -0.93
DDX42-206ENST00000578137 VARSP26640 1264 aaKnown RBP9.26□□□□□ -0.93
DDX42-206ENST00000578137 MDM2Q00987 491 aaPredicted RBP9.26□□□□□ -0.93
DDX42-206ENST00000578137 GUCA2AQ02747 115 aa9.26□□□□□ -0.93
DDX42-206ENST00000578137 PTPRNQ16849 979 aa9.26□□□□□ -0.93
DDX42-206ENST00000578137 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
DDX42-206ENST00000578137 ERCC6Q03468 1493 aa9.26□□□□□ -0.93
DDX42-206ENST00000578137 MS4A1P11836 297 aa9.25□□□□□ -0.93
DDX42-206ENST00000578137 SCARF1Q14162 830 aa9.25□□□□□ -0.93
DDX42-206ENST00000578137 EVA1BQ9NVM1 165 aa9.25□□□□□ -0.93
DDX42-206ENST00000578137 NNTQ13423 1086 aa9.24□□□□□ -0.93
DDX42-206ENST00000578137 UNC93B1Q9H1C4 597 aa9.24□□□□□ -0.93
DDX42-206ENST00000578137 MINK1Q8N4C8 1332 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms