RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
CDK5RAP3-207ENST00000578134 DISP3Q9P2K9 1392 aa23.5■■□□□ 1.35
CDK5RAP3-207ENST00000578134 SAFB2Q14151 953 aaKnown RBP eCLIP23.49■■□□□ 1.35
CDK5RAP3-207ENST00000578134 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
CDK5RAP3-207ENST00000578134 PLEKHH1Q9ULM0 1364 aa23.48■■□□□ 1.35
CDK5RAP3-207ENST00000578134 MINK1Q8N4C8 1332 aaPredicted RBP23.47■■□□□ 1.35
CDK5RAP3-207ENST00000578134 NKTRP30414 1462 aaKnown RBP23.46■■□□□ 1.35
CDK5RAP3-207ENST00000578134 DDX10Q13206 875 aaKnown RBP23.45■■□□□ 1.34
CDK5RAP3-207ENST00000578134 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
CDK5RAP3-207ENST00000578134 WASLO00401 505 aaPredicted RBP23.44■■□□□ 1.34
CDK5RAP3-207ENST00000578134 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
CDK5RAP3-207ENST00000578134 POLR3GLQ9BT43 218 aa23.43■■□□□ 1.34
CDK5RAP3-207ENST00000578134 CDK19Q9BWU1 502 aa23.43■■□□□ 1.34
CDK5RAP3-207ENST00000578134 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
CDK5RAP3-207ENST00000578134 SRPK2P78362 688 aaKnown RBP23.41■■□□□ 1.34
CDK5RAP3-207ENST00000578134 ATAD2Q6PL18 1390 aa23.4■■□□□ 1.34
CDK5RAP3-207ENST00000578134 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
CDK5RAP3-207ENST00000578134 TULP4Q9NRJ4 1543 aa23.4■■□□□ 1.34
CDK5RAP3-207ENST00000578134 NINLQ9Y2I6 1382 aa23.4■■□□□ 1.34
CDK5RAP3-207ENST00000578134 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.37■■□□□ 1.33
CDK5RAP3-207ENST00000578134 CABP2Q9NPB3 220 aa23.36■■□□□ 1.33
CDK5RAP3-207ENST00000578134 ADGRL3Q9HAR2 1447 aa23.34■■□□□ 1.33
CDK5RAP3-207ENST00000578134 C19orf44Q9H6X5 657 aa23.34■■□□□ 1.33
CDK5RAP3-207ENST00000578134 C14orf37Q86TY3 774 aa23.32■■□□□ 1.32
CDK5RAP3-207ENST00000578134 NUDT16Q96DE0 195 aaKnown RBP23.32■■□□□ 1.32
CDK5RAP3-207ENST00000578134 CCDC61Q9Y6R9 512 aa23.32■■□□□ 1.32
CDK5RAP3-207ENST00000578134 ZNF335Q9H4Z2 1342 aaPredicted RBP23.31■■□□□ 1.32
CDK5RAP3-207ENST00000578134 TMC1Q8TDI8 760 aa23.3■■□□□ 1.32
CDK5RAP3-207ENST00000578134 PANK3Q9H999 370 aa23.3■■□□□ 1.32
CDK5RAP3-207ENST00000578134 TMEM94Q12767 1356 aa23.29■■□□□ 1.32
CDK5RAP3-207ENST00000578134 CDC42BPGQ6DT37 1551 aa23.29■■□□□ 1.32
CDK5RAP3-207ENST00000578134 ANKARQ7Z5J8 1434 aa23.29■■□□□ 1.32
CDK5RAP3-207ENST00000578134 STRCP1A6NGW2 1772 aa23.29■■□□□ 1.32
CDK5RAP3-207ENST00000578134 SLC12A5Q9H2X9 1139 aa23.28■■□□□ 1.32
CDK5RAP3-207ENST00000578134 TERF2IPQ9NYB0 399 aa23.28■■□□□ 1.32
CDK5RAP3-207ENST00000578134 DCCP43146 1447 aa23.27■■□□□ 1.32
CDK5RAP3-207ENST00000578134 LRRC7Q96NW7 1537 aa23.25■■□□□ 1.31
CDK5RAP3-207ENST00000578134 PLEKHG3A1L390 1219 aa23.25■■□□□ 1.31
CDK5RAP3-207ENST00000578134 PER1O15534 1290 aaPredicted RBP23.25■■□□□ 1.31
CDK5RAP3-207ENST00000578134 HDGFL2Q7Z4V5 671 aaPredicted RBP23.25■■□□□ 1.31
CDK5RAP3-207ENST00000578134 CABP1Q9NZU7 370 aa23.25■■□□□ 1.31
CDK5RAP3-207ENST00000578134 ANKRD36BQ8N2N9 1353 aa23.25■■□□□ 1.31
CDK5RAP3-207ENST00000578134 ATF3P18847 181 aa23.24■■□□□ 1.31
CDK5RAP3-207ENST00000578134 CADPS2Q86UW7 1296 aa23.24■■□□□ 1.31
CDK5RAP3-207ENST00000578134 ZNF692Q9BU19 519 aaPredicted RBP23.24■■□□□ 1.31
CDK5RAP3-207ENST00000578134 MYOM1P52179 1685 aa23.24■■□□□ 1.31
CDK5RAP3-207ENST00000578134 NALCNQ8IZF0 1738 aa23.24■■□□□ 1.31
CDK5RAP3-207ENST00000578134 MSH6P52701 1360 aa23.24■■□□□ 1.31
CDK5RAP3-207ENST00000578134 ATP7BP35670 1465 aa23.24■■□□□ 1.31
CDK5RAP3-207ENST00000578134 RBM33Q96EV2 1170 aaKnown RBP23.23■■□□□ 1.31
CDK5RAP3-207ENST00000578134 KNSTRNQ9Y448 316 aa23.23■■□□□ 1.31
CDK5RAP3-207ENST00000578134 PRR36Q9H6K5 1346 aa23.22■■□□□ 1.31
CDK5RAP3-207ENST00000578134 PPIP5K1Q6PFW1 1433 aa23.22■■□□□ 1.31
CDK5RAP3-207ENST00000578134 FMN2Q9NZ56 1722 aa23.22■■□□□ 1.31
CDK5RAP3-207ENST00000578134 ANP32CO43423 234 aa23.21■■□□□ 1.31
CDK5RAP3-207ENST00000578134 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
CDK5RAP3-207ENST00000578134 NPC1L1Q9UHC9 1359 aa23.17■■□□□ 1.3
CDK5RAP3-207ENST00000578134 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
CDK5RAP3-207ENST00000578134 CPSF1Q10570 1443 aaKnown RBP23.16■■□□□ 1.3
CDK5RAP3-207ENST00000578134 CARD14Q9BXL6 1004 aa23.16■■□□□ 1.3
CDK5RAP3-207ENST00000578134 NUTM2FA1L443 756 aa23.15■■□□□ 1.3
CDK5RAP3-207ENST00000578134 TOPAZ1Q8N9V7 1692 aa23.15■■□□□ 1.3
CDK5RAP3-207ENST00000578134 LTBP4Q8N2S1 1624 aa23.15■■□□□ 1.3
CDK5RAP3-207ENST00000578134 USP32Q8NFA0 1604 aa23.15■■□□□ 1.3
CDK5RAP3-207ENST00000578134 A0A1W2PP64 1363 aa23.14■■□□□ 1.3
CDK5RAP3-207ENST00000578134 CD163L1Q9NR16 1453 aa23.14■■□□□ 1.29
CDK5RAP3-207ENST00000578134 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.29
CDK5RAP3-207ENST00000578134 PHF8Q9UPP1 1060 aa23.13■■□□□ 1.29
CDK5RAP3-207ENST00000578134 BRD4O60885 1362 aaPredicted RBP23.13■■□□□ 1.29
CDK5RAP3-207ENST00000578134 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
CDK5RAP3-207ENST00000578134 ACEP12821 1306 aa23.12■■□□□ 1.29
CDK5RAP3-207ENST00000578134 CGNL1Q0VF96 1302 aa23.12■■□□□ 1.29
CDK5RAP3-207ENST00000578134 RALBP1Q15311 655 aa23.12■■□□□ 1.29
CDK5RAP3-207ENST00000578134 NGDNQ8NEJ9 315 aaKnown RBP23.12■■□□□ 1.29
CDK5RAP3-207ENST00000578134 ESCO1Q5FWF5 840 aa23.11■■□□□ 1.29
CDK5RAP3-207ENST00000578134 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
CDK5RAP3-207ENST00000578134 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
CDK5RAP3-207ENST00000578134 NSD3Q9BZ95 1437 aa23.1■■□□□ 1.29
CDK5RAP3-207ENST00000578134 PRKRIP1Q9H875 184 aaPredicted RBP23.1■■□□□ 1.29
CDK5RAP3-207ENST00000578134 NSD2O96028 1365 aa23.1■■□□□ 1.29
CDK5RAP3-207ENST00000578134 MST1RQ04912 1400 aa23.09■■□□□ 1.29
CDK5RAP3-207ENST00000578134 EDC4Q6P2E9 1401 aaKnown RBP23.09■■□□□ 1.29
CDK5RAP3-207ENST00000578134 PMFBP1Q8TBY8 1022 aa23.08■■□□□ 1.29
CDK5RAP3-207ENST00000578134 MIER1Q8N108 512 aa23.07■■□□□ 1.28
CDK5RAP3-207ENST00000578134 SLAIN2Q9P270 581 aa23.07■■□□□ 1.28
CDK5RAP3-207ENST00000578134 RGPD8O14715 1765 aaPredicted RBP23.06■■□□□ 1.28
CDK5RAP3-207ENST00000578134 AKAP12Q02952 1782 aa23.05■■□□□ 1.28
CDK5RAP3-207ENST00000578134 TTC21AQ8NDW8 1320 aa23.05■■□□□ 1.28
CDK5RAP3-207ENST00000578134 ORAI2Q96SN7 254 aa23.04■■□□□ 1.28
CDK5RAP3-207ENST00000578134 USP6P35125 1406 aa23.04■■□□□ 1.28
CDK5RAP3-207ENST00000578134 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
CDK5RAP3-207ENST00000578134 CCER2I3L3R5 266 aa23.03■■□□□ 1.28
CDK5RAP3-207ENST00000578134 PSME1Q06323 249 aa23.03■■□□□ 1.28
CDK5RAP3-207ENST00000578134 CC2D1BQ5T0F9 858 aaKnown RBP23.03■■□□□ 1.28
CDK5RAP3-207ENST00000578134 PARD3Q8TEW0 1356 aa23.02■■□□□ 1.28
CDK5RAP3-207ENST00000578134 MON2Q7Z3U7 1717 aa23.02■■□□□ 1.28
CDK5RAP3-207ENST00000578134 FYB1O15117 783 aa23.02■■□□□ 1.28
CDK5RAP3-207ENST00000578134 TTC21BQ7Z4L5 1316 aa23.02■■□□□ 1.28
CDK5RAP3-207ENST00000578134 SSH2Q76I76 1423 aa23.01■■□□□ 1.27
CDK5RAP3-207ENST00000578134 IQSEC2Q5JU85 1478 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms