RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 PTPRUQ92729 1446 aa25.46■■□□□ 1.67
PRKCA-203ENST00000578063 MINK1Q8N4C8 1332 aaPredicted RBP25.46■■□□□ 1.67
PRKCA-203ENST00000578063 WAPLQ7Z5K2 1190 aa25.45■■□□□ 1.66
PRKCA-203ENST00000578063 PTCH1Q13635 1447 aa25.45■■□□□ 1.66
PRKCA-203ENST00000578063 NPHP4O75161 1426 aaPredicted RBP25.44■■□□□ 1.66
PRKCA-203ENST00000578063 ROBO2Q9HCK4 1378 aa25.43■■□□□ 1.66
PRKCA-203ENST00000578063 PER1O15534 1290 aaPredicted RBP25.43■■□□□ 1.66
PRKCA-203ENST00000578063 XRN1Q8IZH2 1706 aaKnown RBP25.42■■□□□ 1.66
PRKCA-203ENST00000578063 ATAD2Q6PL18 1390 aa25.41■■□□□ 1.66
PRKCA-203ENST00000578063 KTN1Q86UP2 1357 aaKnown RBP25.41■■□□□ 1.66
PRKCA-203ENST00000578063 NINLQ9Y2I6 1382 aa25.41■■□□□ 1.66
PRKCA-203ENST00000578063 AMOTL2Q9Y2J4 779 aa25.41■■□□□ 1.66
PRKCA-203ENST00000578063 SRPK2P78362 688 aaKnown RBP25.39■■□□□ 1.65
PRKCA-203ENST00000578063 CABP2Q9NPB3 220 aa25.38■■□□□ 1.65
PRKCA-203ENST00000578063 ADGRB2O60241 1585 aa25.37■■□□□ 1.65
PRKCA-203ENST00000578063 CDK19Q9BWU1 502 aa25.36■■□□□ 1.65
PRKCA-203ENST00000578063 KNSTRNQ9Y448 316 aa25.36■■□□□ 1.65
PRKCA-203ENST00000578063 NCKAP5LQ9HCH0 1330 aa25.35■■□□□ 1.65
PRKCA-203ENST00000578063 RALBP1Q15311 655 aa25.34■■□□□ 1.65
PRKCA-203ENST00000578063 TMC1Q8TDI8 760 aa25.34■■□□□ 1.65
PRKCA-203ENST00000578063 WASLO00401 505 aaPredicted RBP25.33■■□□□ 1.65
PRKCA-203ENST00000578063 LMTK3Q96Q04 1460 aa25.33■■□□□ 1.64
PRKCA-203ENST00000578063 NPC1L1Q9UHC9 1359 aa25.32■■□□□ 1.64
PRKCA-203ENST00000578063 SLC12A5Q9H2X9 1139 aa25.32■■□□□ 1.64
PRKCA-203ENST00000578063 CHD2O14647 1828 aaKnown RBP25.31■■□□□ 1.64
PRKCA-203ENST00000578063 ANKRD36BQ8N2N9 1353 aa25.31■■□□□ 1.64
PRKCA-203ENST00000578063 PARD3Q8TEW0 1356 aa25.31■■□□□ 1.64
PRKCA-203ENST00000578063 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.3■■□□□ 1.64
PRKCA-203ENST00000578063 KCNA6P17658 529 aa25.29■■□□□ 1.64
PRKCA-203ENST00000578063 HSPA2P54652 639 aa25.29■■□□□ 1.64
PRKCA-203ENST00000578063 AMER1Q5JTC6 1135 aaPredicted RBP25.28■■□□□ 1.64
PRKCA-203ENST00000578063 CNGB1Q14028 1251 aaPredicted RBP25.26■■□□□ 1.63
PRKCA-203ENST00000578063 CARD14Q9BXL6 1004 aa25.26■■□□□ 1.63
PRKCA-203ENST00000578063 MYBBP1AQ9BQG0 1328 aaKnown RBP25.26■■□□□ 1.63
PRKCA-203ENST00000578063 NWD1Q149M9 1564 aa25.26■■□□□ 1.63
PRKCA-203ENST00000578063 NSD3Q9BZ95 1437 aa25.26■■□□□ 1.63
PRKCA-203ENST00000578063 USP32Q8NFA0 1604 aa25.25■■□□□ 1.63
PRKCA-203ENST00000578063 CC2D1BQ5T0F9 858 aaKnown RBP25.25■■□□□ 1.63
PRKCA-203ENST00000578063 TERF2IPQ9NYB0 399 aa25.24■■□□□ 1.63
PRKCA-203ENST00000578063 ATP7BP35670 1465 aa25.24■■□□□ 1.63
PRKCA-203ENST00000578063 A0A1W2PP64 1363 aa25.22■■□□□ 1.63
PRKCA-203ENST00000578063 CD163L1Q9NR16 1453 aa25.21■■□□□ 1.63
PRKCA-203ENST00000578063 NUDT16Q96DE0 195 aaKnown RBP25.2■■□□□ 1.63
PRKCA-203ENST00000578063 YTHDC1Q96MU7 727 aaKnown RBP25.2■■□□□ 1.63
PRKCA-203ENST00000578063 MRS2Q9HD23 443 aa25.2■■□□□ 1.63
PRKCA-203ENST00000578063 HDGFL2Q7Z4V5 671 aaPredicted RBP25.2■■□□□ 1.62
PRKCA-203ENST00000578063 CABP1Q9NZU7 370 aa25.2■■□□□ 1.62
PRKCA-203ENST00000578063 CCDC61Q9Y6R9 512 aa25.2■■□□□ 1.62
PRKCA-203ENST00000578063 PPIP5K1Q6PFW1 1433 aa25.2■■□□□ 1.62
PRKCA-203ENST00000578063 BRD4O60885 1362 aaPredicted RBP25.19■■□□□ 1.62
PRKCA-203ENST00000578063 NKTRP30414 1462 aaKnown RBP25.19■■□□□ 1.62
PRKCA-203ENST00000578063 CGNL1Q0VF96 1302 aa25.18■■□□□ 1.62
PRKCA-203ENST00000578063 NLRP13Q86W25 1043 aa25.17■■□□□ 1.62
PRKCA-203ENST00000578063 NSD2O96028 1365 aa25.17■■□□□ 1.62
PRKCA-203ENST00000578063 CCDC184Q52MB2 194 aa25.16■■□□□ 1.62
PRKCA-203ENST00000578063 PRR36Q9H6K5 1346 aa25.16■■□□□ 1.62
PRKCA-203ENST00000578063 TOPAZ1Q8N9V7 1692 aa25.15■■□□□ 1.62
PRKCA-203ENST00000578063 CDC42BPGQ6DT37 1551 aa25.15■■□□□ 1.62
PRKCA-203ENST00000578063 ADGRL3Q9HAR2 1447 aa25.14■■□□□ 1.62
PRKCA-203ENST00000578063 ANKARQ7Z5J8 1434 aa25.14■■□□□ 1.61
PRKCA-203ENST00000578063 CPSF1Q10570 1443 aaKnown RBP25.13■■□□□ 1.61
PRKCA-203ENST00000578063 NALCNQ8IZF0 1738 aa25.13■■□□□ 1.61
PRKCA-203ENST00000578063 STRCQ7RTU9 1775 aa25.12■■□□□ 1.61
PRKCA-203ENST00000578063 FMN2Q9NZ56 1722 aa25.1■■□□□ 1.61
PRKCA-203ENST00000578063 ITSN1Q15811 1721 aa25.1■■□□□ 1.61
PRKCA-203ENST00000578063 PLEKHG3A1L390 1219 aa25.08■■□□□ 1.61
PRKCA-203ENST00000578063 EDC4Q6P2E9 1401 aaKnown RBP25.08■■□□□ 1.61
PRKCA-203ENST00000578063 CENPBP07199 599 aaPredicted RBP25.07■■□□□ 1.6
PRKCA-203ENST00000578063 PPP2R1AP30153 589 aa25.07■■□□□ 1.6
PRKCA-203ENST00000578063 ZNF692Q9BU19 519 aaPredicted RBP25.06■■□□□ 1.6
PRKCA-203ENST00000578063 MON2Q7Z3U7 1717 aa25.06■■□□□ 1.6
PRKCA-203ENST00000578063 MORC1Q86VD1 984 aa25.06■■□□□ 1.6
PRKCA-203ENST00000578063 PROSER2Q86WR7 435 aaPredicted RBP25.06■■□□□ 1.6
PRKCA-203ENST00000578063 AKAP12Q02952 1782 aa25.05■■□□□ 1.6
PRKCA-203ENST00000578063 NUTM2FA1L443 756 aa25.04■■□□□ 1.6
PRKCA-203ENST00000578063 NCOA3Q9Y6Q9 1424 aa25.04■■□□□ 1.6
PRKCA-203ENST00000578063 C14orf37Q86TY3 774 aa25.03■■□□□ 1.6
PRKCA-203ENST00000578063 RBM33Q96EV2 1170 aaKnown RBP25.02■■□□□ 1.6
PRKCA-203ENST00000578063 ANKRD26Q9UPS8 1709 aa25.02■■□□□ 1.6
PRKCA-203ENST00000578063 KIF20BQ96Q89 1820 aa25.01■■□□□ 1.59
PRKCA-203ENST00000578063 FAM9BQ8IZU0 186 aa25.01■■□□□ 1.59
PRKCA-203ENST00000578063 PNISRQ8TF01 805 aaKnown RBP25.01■■□□□ 1.59
PRKCA-203ENST00000578063 ACEP12821 1306 aa25.01■■□□□ 1.59
PRKCA-203ENST00000578063 STRCP1A6NGW2 1772 aa25.01■■□□□ 1.59
PRKCA-203ENST00000578063 FYB1O15117 783 aa25■■□□□ 1.59
PRKCA-203ENST00000578063 POLR3AO14802 1390 aaPredicted RBP25■■□□□ 1.59
PRKCA-203ENST00000578063 USP6P35125 1406 aa24.98■■□□□ 1.59
PRKCA-203ENST00000578063 NRKQ7Z2Y5 1582 aa24.98■■□□□ 1.59
PRKCA-203ENST00000578063 TMEM94Q12767 1356 aa24.98■■□□□ 1.59
PRKCA-203ENST00000578063 GGNBP2Q9H3C7 697 aa24.97■■□□□ 1.59
PRKCA-203ENST00000578063 DMRT2Q9Y5R5 561 aa24.97■■□□□ 1.59
PRKCA-203ENST00000578063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.96■■□□□ 1.593e-7■■■■□ 24.6
PRKCA-203ENST00000578063 C19orf44Q9H6X5 657 aa24.96■■□□□ 1.59
PRKCA-203ENST00000578063 RGPD8O14715 1765 aaPredicted RBP24.96■■□□□ 1.59
PRKCA-203ENST00000578063 DCCP43146 1447 aa24.96■■□□□ 1.59
PRKCA-203ENST00000578063 NGDNQ8NEJ9 315 aaKnown RBP24.94■■□□□ 1.58
PRKCA-203ENST00000578063 PMFBP1Q8TBY8 1022 aa24.94■■□□□ 1.58
PRKCA-203ENST00000578063 SSH2Q76I76 1423 aa24.93■■□□□ 1.58
PRKCA-203ENST00000578063 TTC21BQ7Z4L5 1316 aa24.92■■□□□ 1.58
PRKCA-203ENST00000578063 INSRP06213 1382 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms