RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 XIRP1Q702N8 1843 aaKnown RBP17.59■□□□□ 0.41
RARA-208ENST00000577646 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
RARA-208ENST00000577646 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
RARA-208ENST00000577646 ADGRL3Q9HAR2 1447 aa17.59■□□□□ 0.41
RARA-208ENST00000577646 ATF3P18847 181 aa17.59■□□□□ 0.41
RARA-208ENST00000577646 POGKQ9P215 609 aa17.59■□□□□ 0.41
RARA-208ENST00000577646 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
RARA-208ENST00000577646 TRAK1Q9UPV9 953 aa17.58■□□□□ 0.4
RARA-208ENST00000577646 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
RARA-208ENST00000577646 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
RARA-208ENST00000577646 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
RARA-208ENST00000577646 WAPLQ7Z5K2 1190 aa17.55■□□□□ 0.4
RARA-208ENST00000577646 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
RARA-208ENST00000577646 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
RARA-208ENST00000577646 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.52■□□□□ 0.4
RARA-208ENST00000577646 CENPJQ9HC77 1338 aaPredicted RBP17.52■□□□□ 0.4
RARA-208ENST00000577646 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
RARA-208ENST00000577646 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
RARA-208ENST00000577646 PLEKHH1Q9ULM0 1364 aa17.5■□□□□ 0.39
RARA-208ENST00000577646 NALCNQ8IZF0 1738 aa17.49■□□□□ 0.39
RARA-208ENST00000577646 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
RARA-208ENST00000577646 SBNO2Q9Y2G9 1366 aa17.48■□□□□ 0.39
RARA-208ENST00000577646 ROBO1Q9Y6N7 1651 aa17.48■□□□□ 0.39
RARA-208ENST00000577646 WASLO00401 505 aaPredicted RBP17.46■□□□□ 0.39
RARA-208ENST00000577646 MST1RQ04912 1400 aa17.46■□□□□ 0.39
RARA-208ENST00000577646 SAFB2Q14151 953 aaKnown RBP eCLIP17.45■□□□□ 0.38
RARA-208ENST00000577646 ANKARQ7Z5J8 1434 aa17.45■□□□□ 0.38
RARA-208ENST00000577646 ZEB1P37275 1124 aaPredicted RBP17.44■□□□□ 0.38
RARA-208ENST00000577646 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
RARA-208ENST00000577646 MINK1Q8N4C8 1332 aaPredicted RBP17.44■□□□□ 0.38
RARA-208ENST00000577646 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
RARA-208ENST00000577646 C1orf167Q5SNV9 1468 aa17.43■□□□□ 0.38
RARA-208ENST00000577646 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
RARA-208ENST00000577646 USP47Q96K76 1375 aa17.4■□□□□ 0.38
RARA-208ENST00000577646 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
RARA-208ENST00000577646 CDK19Q9BWU1 502 aa17.4■□□□□ 0.38
RARA-208ENST00000577646 RGS17Q9UGC6 210 aaPredicted RBP17.4■□□□□ 0.38
RARA-208ENST00000577646 QRICH2Q9H0J4 1663 aa17.39■□□□□ 0.37
RARA-208ENST00000577646 ST20-MTHFSA0A0A6YYL1 179 aa17.39■□□□□ 0.37
RARA-208ENST00000577646 BRINP3Q76B58 766 aa17.39■□□□□ 0.37
RARA-208ENST00000577646 HIRIP3Q9BW71 556 aaPredicted RBP17.39■□□□□ 0.37
RARA-208ENST00000577646 TULP4Q9NRJ4 1543 aa17.38■□□□□ 0.37
RARA-208ENST00000577646 PHLPP1O60346 1717 aa17.38■□□□□ 0.37
RARA-208ENST00000577646 CDCA8Q53HL2 280 aa17.37■□□□□ 0.37
RARA-208ENST00000577646 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
RARA-208ENST00000577646 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
RARA-208ENST00000577646 JCADQ9P266 1359 aa17.37■□□□□ 0.37
RARA-208ENST00000577646 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
RARA-208ENST00000577646 TESK2Q96S53 571 aa17.36■□□□□ 0.37
RARA-208ENST00000577646 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
RARA-208ENST00000577646 ORAI2Q96SN7 254 aa17.35■□□□□ 0.37
RARA-208ENST00000577646 PHF8Q9UPP1 1060 aa17.35■□□□□ 0.37
RARA-208ENST00000577646 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
RARA-208ENST00000577646 TMF1P82094 1093 aa17.34■□□□□ 0.37
RARA-208ENST00000577646 KIF1AQ12756 1690 aa17.33■□□□□ 0.37
RARA-208ENST00000577646 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.37
RARA-208ENST00000577646 ATAD2Q6PL18 1390 aa17.33■□□□□ 0.36
RARA-208ENST00000577646 PLEKHG3A1L390 1219 aa17.33■□□□□ 0.36
RARA-208ENST00000577646 ATP7BP35670 1465 aa17.31■□□□□ 0.36
RARA-208ENST00000577646 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
RARA-208ENST00000577646 ITSN1Q15811 1721 aa17.31■□□□□ 0.36
RARA-208ENST00000577646 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
RARA-208ENST00000577646 PSME1Q06323 249 aa17.31■□□□□ 0.36
RARA-208ENST00000577646 LRRC59Q96AG4 307 aaKnown RBP17.31■□□□□ 0.36
RARA-208ENST00000577646 SOS2Q07890 1332 aaPredicted RBP17.3■□□□□ 0.36
RARA-208ENST00000577646 SPATA31A6Q5VVP1 1343 aa17.3■□□□□ 0.36
RARA-208ENST00000577646 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
RARA-208ENST00000577646 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
RARA-208ENST00000577646 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
RARA-208ENST00000577646 COL16A1Q07092 1604 aaPredicted RBP17.29■□□□□ 0.36
RARA-208ENST00000577646 NHSL1Q5SYE7 1610 aa17.29■□□□□ 0.36
RARA-208ENST00000577646 HSPA5P11021 654 aaKnown RBP17.29■□□□□ 0.36
RARA-208ENST00000577646 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
RARA-208ENST00000577646 FOXO3O43524 673 aa17.28■□□□□ 0.36
RARA-208ENST00000577646 MEX3CQ5U5Q3 659 aaKnown RBP17.28■□□□□ 0.36
RARA-208ENST00000577646 NGDNQ8NEJ9 315 aaKnown RBP17.28■□□□□ 0.36
RARA-208ENST00000577646 ZNF692Q9BU19 519 aaPredicted RBP17.28■□□□□ 0.36
RARA-208ENST00000577646 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
RARA-208ENST00000577646 POTEAQ6S8J7 498 aa17.27■□□□□ 0.36
RARA-208ENST00000577646 KRT28Q7Z3Y7 464 aa17.26■□□□□ 0.35
RARA-208ENST00000577646 PPIP5K1Q6PFW1 1433 aa17.26■□□□□ 0.35
RARA-208ENST00000577646 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
RARA-208ENST00000577646 PMFBP1Q8TBY8 1022 aa17.25■□□□□ 0.35
RARA-208ENST00000577646 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
RARA-208ENST00000577646 TOPAZ1Q8N9V7 1692 aa17.25■□□□□ 0.35
RARA-208ENST00000577646 SBNO1A3KN83 1393 aa17.25■□□□□ 0.35
RARA-208ENST00000577646 DDX17Q92841 729 aaKnown RBP17.24■□□□□ 0.35
RARA-208ENST00000577646 ACEP12821 1306 aa17.23■□□□□ 0.35
RARA-208ENST00000577646 NUTM2BA6NNL0 878 aaPredicted RBP17.23■□□□□ 0.35
RARA-208ENST00000577646 NUTM2EB1AL46 878 aaPredicted RBP17.23■□□□□ 0.35
RARA-208ENST00000577646 NUTM2AQ8IVF1 878 aaPredicted RBP17.23■□□□□ 0.35
RARA-208ENST00000577646 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
RARA-208ENST00000577646 PXDNQ92626 1479 aa17.23■□□□□ 0.35
RARA-208ENST00000577646 SHPRHQ149N8 1683 aa17.21■□□□□ 0.35
RARA-208ENST00000577646 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.34
RARA-208ENST00000577646 ARHGEF10O15013 1369 aa17.2■□□□□ 0.34
RARA-208ENST00000577646 HDGFL2Q7Z4V5 671 aaPredicted RBP17.2■□□□□ 0.34
RARA-208ENST00000577646 CPSF1Q10570 1443 aaKnown RBP17.19■□□□□ 0.34
RARA-208ENST00000577646 ZNF772Q68DY9 489 aaPredicted RBP17.18■□□□□ 0.34
RARA-208ENST00000577646 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms