RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 ROBO2Q9HCK4 1378 aa19.64■□□□□ 0.73
CUEDC1-205ENST00000577589 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
CUEDC1-205ENST00000577589 RALGAPBQ86X10 1494 aa19.64■□□□□ 0.73
CUEDC1-205ENST00000577589 CLTCL1P53675 1640 aa19.64■□□□□ 0.73
CUEDC1-205ENST00000577589 GJD4Q96KN9 370 aaPredicted RBP19.61■□□□□ 0.73
CUEDC1-205ENST00000577589 SLIT2O94813 1529 aa19.61■□□□□ 0.73
CUEDC1-205ENST00000577589 CDC42BPGQ6DT37 1551 aa19.59■□□□□ 0.73
CUEDC1-205ENST00000577589 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
CUEDC1-205ENST00000577589 NUP155O75694 1391 aa19.57■□□□□ 0.72
CUEDC1-205ENST00000577589 USP32Q8NFA0 1604 aa19.56■□□□□ 0.72
CUEDC1-205ENST00000577589 ROCK1Q13464 1354 aa19.56■□□□□ 0.72
CUEDC1-205ENST00000577589 PLCH1Q4KWH8 1693 aa19.53■□□□□ 0.72
CUEDC1-205ENST00000577589 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
CUEDC1-205ENST00000577589 KIF1BO60333 1816 aa19.53■□□□□ 0.72
CUEDC1-205ENST00000577589 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
CUEDC1-205ENST00000577589 XPCQ01831 940 aaPredicted RBP19.51■□□□□ 0.71
CUEDC1-205ENST00000577589 ABCA3Q99758 1704 aa19.51■□□□□ 0.71
CUEDC1-205ENST00000577589 HFM1A2PYH4 1435 aa19.51■□□□□ 0.71
CUEDC1-205ENST00000577589 PSDA5PKW4 1024 aaPredicted RBP19.5■□□□□ 0.71
CUEDC1-205ENST00000577589 HRCP23327 699 aa19.5■□□□□ 0.71
CUEDC1-205ENST00000577589 UNC5CLQ8IV45 518 aa19.5■□□□□ 0.71
CUEDC1-205ENST00000577589 NWD2Q9ULI1 1742 aa19.49■□□□□ 0.71
CUEDC1-205ENST00000577589 APLP2Q06481 763 aa19.49■□□□□ 0.71
CUEDC1-205ENST00000577589 PPLO60437 1756 aa19.47■□□□□ 0.71
CUEDC1-205ENST00000577589 SEPT12Q8IYM1 358 aa19.47■□□□□ 0.71
CUEDC1-205ENST00000577589 FOXO3O43524 673 aa19.46■□□□□ 0.71
CUEDC1-205ENST00000577589 ESCO1Q5FWF5 840 aa19.45■□□□□ 0.7
CUEDC1-205ENST00000577589 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
CUEDC1-205ENST00000577589 TNS1Q9HBL0 1735 aaKnown RBP19.45■□□□□ 0.7
CUEDC1-205ENST00000577589 FMN2Q9NZ56 1722 aa19.45■□□□□ 0.7
CUEDC1-205ENST00000577589 NAIPQ13075 1403 aa19.44■□□□□ 0.7
CUEDC1-205ENST00000577589 KIF1AQ12756 1690 aa19.43■□□□□ 0.7
CUEDC1-205ENST00000577589 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
CUEDC1-205ENST00000577589 ONECUT3O60422 494 aaPredicted RBP19.42■□□□□ 0.7
CUEDC1-205ENST00000577589 SPATA31A3Q5VYP0 1347 aa19.42■□□□□ 0.7
CUEDC1-205ENST00000577589 SF3B2Q13435 895 aaKnown RBP19.4■□□□□ 0.7
CUEDC1-205ENST00000577589 VPS72Q15906 364 aa19.4■□□□□ 0.7
CUEDC1-205ENST00000577589 KRT27Q7Z3Y8 459 aa19.39■□□□□ 0.69
CUEDC1-205ENST00000577589 KNDC1Q76NI1 1749 aa19.39■□□□□ 0.69
CUEDC1-205ENST00000577589 RGPD8O14715 1765 aaPredicted RBP19.39■□□□□ 0.69
CUEDC1-205ENST00000577589 TECPR2O15040 1411 aa19.38■□□□□ 0.69
CUEDC1-205ENST00000577589 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
CUEDC1-205ENST00000577589 DISP2A7MBM2 1401 aa19.36■□□□□ 0.69
CUEDC1-205ENST00000577589 TNS3Q68CZ2 1445 aa19.36■□□□□ 0.69
CUEDC1-205ENST00000577589 LRPPRCP42704 1394 aaKnown RBP19.36■□□□□ 0.69
CUEDC1-205ENST00000577589 IFT172Q9UG01 1749 aa19.36■□□□□ 0.69
CUEDC1-205ENST00000577589 PLEKHH1Q9ULM0 1364 aa19.35■□□□□ 0.69
CUEDC1-205ENST00000577589 NUTM2FA1L443 756 aa19.35■□□□□ 0.69
CUEDC1-205ENST00000577589 BAG6P46379 1132 aa19.35■□□□□ 0.69
CUEDC1-205ENST00000577589 THSD7AQ9UPZ6 1657 aa19.34■□□□□ 0.69
CUEDC1-205ENST00000577589 VGFO15240 615 aaPredicted RBP19.33■□□□□ 0.68
CUEDC1-205ENST00000577589 EN1Q05925 392 aaPredicted RBP19.33■□□□□ 0.68
CUEDC1-205ENST00000577589 R3HDM1Q15032 1099 aaKnown RBP19.33■□□□□ 0.68
CUEDC1-205ENST00000577589 CABLES1Q8TDN4 633 aa19.33■□□□□ 0.68
CUEDC1-205ENST00000577589 WAPLQ7Z5K2 1190 aa19.31■□□□□ 0.68
CUEDC1-205ENST00000577589 RREB1Q92766 1687 aa19.3■□□□□ 0.68
CUEDC1-205ENST00000577589 TRPM3Q9HCF6 1732 aaPredicted RBP19.28■□□□□ 0.68
CUEDC1-205ENST00000577589 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
CUEDC1-205ENST00000577589 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
CUEDC1-205ENST00000577589 CRYBG1Q9Y4K1 1723 aa19.28■□□□□ 0.68
CUEDC1-205ENST00000577589 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.68
CUEDC1-205ENST00000577589 FAM98CQ17RN3 349 aaKnown RBP19.27■□□□□ 0.68
CUEDC1-205ENST00000577589 CCDC9Q9Y3X0 531 aaKnown RBP19.27■□□□□ 0.68
CUEDC1-205ENST00000577589 NUP188Q5SRE5 1749 aa19.27■□□□□ 0.68
CUEDC1-205ENST00000577589 NRXN1Q9ULB1 1477 aa19.27■□□□□ 0.67
CUEDC1-205ENST00000577589 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
CUEDC1-205ENST00000577589 YY1P25490 414 aa19.26■□□□□ 0.67
CUEDC1-205ENST00000577589 ITGAEP38570 1179 aa19.26■□□□□ 0.67
CUEDC1-205ENST00000577589 COL14A1Q05707 1796 aaKnown RBP19.26■□□□□ 0.67
CUEDC1-205ENST00000577589 ALS2Q96Q42 1657 aa19.25■□□□□ 0.67
CUEDC1-205ENST00000577589 ADGRB2O60241 1585 aa19.25■□□□□ 0.67
CUEDC1-205ENST00000577589 SBNO1A3KN83 1393 aa19.25■□□□□ 0.67
CUEDC1-205ENST00000577589 ADGRF5Q8IZF2 1346 aa19.25■□□□□ 0.67
CUEDC1-205ENST00000577589 ABCC11Q96J66 1382 aa19.24■□□□□ 0.67
CUEDC1-205ENST00000577589 RRBP1Q9P2E9 1410 aaKnown RBP19.24■□□□□ 0.67
CUEDC1-205ENST00000577589 PLEKHG5O94827 1062 aa19.23■□□□□ 0.67
CUEDC1-205ENST00000577589 EZH2Q15910 746 aaKnown RBP19.23■□□□□ 0.67
CUEDC1-205ENST00000577589 STK26Q9P289 416 aa19.23■□□□□ 0.67
CUEDC1-205ENST00000577589 UTRNP46939 3433 aa19.23■□□□□ 0.67
CUEDC1-205ENST00000577589 A0A0G2JS52 829 aa19.21■□□□□ 0.67
CUEDC1-205ENST00000577589 MYT1Q01538 1121 aa19.21■□□□□ 0.67
CUEDC1-205ENST00000577589 CAMKK2Q96RR4 588 aa19.21■□□□□ 0.67
CUEDC1-205ENST00000577589 CAMTA1Q9Y6Y1 1673 aa19.2■□□□□ 0.66
CUEDC1-205ENST00000577589 ARHGEF10O15013 1369 aa19.2■□□□□ 0.66
CUEDC1-205ENST00000577589 HAP1P54257 671 aaPredicted RBP19.2■□□□□ 0.66
CUEDC1-205ENST00000577589 PHF8Q9UPP1 1060 aa19.2■□□□□ 0.66
CUEDC1-205ENST00000577589 PIK3C2GO75747 1445 aa19.19■□□□□ 0.66
CUEDC1-205ENST00000577589 SPATA31E1Q6ZUB1 1445 aa19.18■□□□□ 0.66
CUEDC1-205ENST00000577589 YTHDC2Q9H6S0 1430 aaKnown RBP19.18■□□□□ 0.66
CUEDC1-205ENST00000577589 TMEM132EQ6IEE7 984 aa19.18■□□□□ 0.66
CUEDC1-205ENST00000577589 BTG4Q9NY30 223 aa19.18■□□□□ 0.66
CUEDC1-205ENST00000577589 SPATA31A5Q5VU36 1347 aa19.18■□□□□ 0.66
CUEDC1-205ENST00000577589 SPATA31A7Q8IWB4 1347 aa19.18■□□□□ 0.66
CUEDC1-205ENST00000577589 PSME1Q06323 249 aa19.14■□□□□ 0.65
CUEDC1-205ENST00000577589 PARD3Q8TEW0 1356 aa19.13■□□□□ 0.65
CUEDC1-205ENST00000577589 TRIM37O94972 964 aa19.12■□□□□ 0.65
CUEDC1-205ENST00000577589 LMOD2Q6P5Q4 547 aa19.12■□□□□ 0.65
CUEDC1-205ENST00000577589 CEP350Q5VT06 3117 aa19.11■□□□□ 0.65
CUEDC1-205ENST00000577589 ANKARQ7Z5J8 1434 aa19.09■□□□□ 0.65
CUEDC1-205ENST00000577589 CASZ1Q86V15 1759 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms