RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TROQ12816 1431 aaPredicted RBP7.27□□□□□ -1.25
VAPA-203ENST00000577539 HNRNPMP52272 730 aaKnown RBP eCLIP7.27□□□□□ -1.25
VAPA-203ENST00000577539 COLQQ9Y215 455 aaPredicted RBP7.27□□□□□ -1.25
VAPA-203ENST00000577539 CNTLNQ9NXG0 1405 aa7.27□□□□□ -1.25
VAPA-203ENST00000577539 NUP155O75694 1391 aa7.27□□□□□ -1.25
VAPA-203ENST00000577539 ROCK1Q13464 1354 aa7.27□□□□□ -1.25
VAPA-203ENST00000577539 ARID3AQ99856 593 aa7.27□□□□□ -1.25
VAPA-203ENST00000577539 ANKRD30AQ9BXX3 1397 aa7.27□□□□□ -1.25
VAPA-203ENST00000577539 EN1Q05925 392 aaPredicted RBP7.26□□□□□ -1.25
VAPA-203ENST00000577539 TSR1Q2NL82 804 aaKnown RBP7.26□□□□□ -1.25
VAPA-203ENST00000577539 CARD11Q9BXL7 1154 aa7.26□□□□□ -1.25
VAPA-203ENST00000577539 RBM19Q9Y4C8 960 aaKnown RBP7.26□□□□□ -1.25
VAPA-203ENST00000577539 PLSCR2Q9NRY7 297 aa7.25□□□□□ -1.25
VAPA-203ENST00000577539 KDM5BQ9UGL1 1544 aa7.25□□□□□ -1.25
VAPA-203ENST00000577539 KIAA0556O60303 1618 aa7.25□□□□□ -1.25
VAPA-203ENST00000577539 EVI5O60447 810 aa7.25□□□□□ -1.25
VAPA-203ENST00000577539 RPRD2Q5VT52 1461 aaKnown RBP7.25□□□□□ -1.25
VAPA-203ENST00000577539 RGL3Q3MIN7 710 aa7.25□□□□□ -1.25
VAPA-203ENST00000577539 FAM217BQ9NTX9 383 aaPredicted RBP7.25□□□□□ -1.25
VAPA-203ENST00000577539 SLC34A2O95436 690 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 DCAF11Q8TEB1 546 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 CAMSAP2Q08AD1 1489 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 NUTM2FA1L443 756 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 NCOA1Q15788 1441 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 FAM161AQ3B820 660 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 ANKRD50Q9ULJ7 1429 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 RAPGEF6Q8TEU7 1601 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 GCC2Q8IWJ2 1684 aa7.24□□□□□ -1.25
VAPA-203ENST00000577539 TMC1Q8TDI8 760 aa7.23□□□□□ -1.25
VAPA-203ENST00000577539 USP47Q96K76 1375 aa7.23□□□□□ -1.25
VAPA-203ENST00000577539 PCDHGA10Q9Y5H3 936 aa7.23□□□□□ -1.25
VAPA-203ENST00000577539 GPATCH8Q9UKJ3 1502 aaKnown RBP7.23□□□□□ -1.25
VAPA-203ENST00000577539 TMC2Q8TDI7 906 aa7.23□□□□□ -1.25
VAPA-203ENST00000577539 C3orf80F5H4A9 247 aa7.23□□□□□ -1.25
VAPA-203ENST00000577539 OCEL1Q9H607 264 aa7.23□□□□□ -1.25
VAPA-203ENST00000577539 COG6Q9Y2V7 657 aa7.23□□□□□ -1.25
VAPA-203ENST00000577539 B4GALNT3Q6L9W6 998 aa7.22□□□□□ -1.25
VAPA-203ENST00000577539 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
VAPA-203ENST00000577539 KIAA1107Q9UPP5 1409 aa7.22□□□□□ -1.25
VAPA-203ENST00000577539 SKIV2LQ15477 1246 aaKnown RBP7.22□□□□□ -1.25
VAPA-203ENST00000577539 MYSM1Q5VVJ2 828 aa7.22□□□□□ -1.25
VAPA-203ENST00000577539 METTL3Q86U44 580 aaKnown RBP7.22□□□□□ -1.25
VAPA-203ENST00000577539 NLRP7Q8WX94 980 aa7.22□□□□□ -1.25
VAPA-203ENST00000577539 SALL2Q9Y467 1007 aaPredicted RBP7.22□□□□□ -1.25
VAPA-203ENST00000577539 EIF4G3O43432 1585 aaKnown RBP7.22□□□□□ -1.25
VAPA-203ENST00000577539 IRF5Q13568 498 aa7.22□□□□□ -1.25
VAPA-203ENST00000577539 IER5LQ5T953 404 aa7.22□□□□□ -1.25
VAPA-203ENST00000577539 UPF1Q92900 1129 aaKnown RBP eCLIP7.22□□□□□ -1.25
VAPA-203ENST00000577539 ANP32EQ9BTT0 268 aa7.21□□□□□ -1.25
VAPA-203ENST00000577539 DNMT1P26358 1616 aaKnown RBP7.21□□□□□ -1.25
VAPA-203ENST00000577539 MAGI1Q96QZ7 1491 aaPredicted RBP7.21□□□□□ -1.26
VAPA-203ENST00000577539 ST20-MTHFSA0A0A6YYL1 179 aa7.21□□□□□ -1.26
VAPA-203ENST00000577539 PROSER2Q86WR7 435 aaPredicted RBP7.21□□□□□ -1.26
VAPA-203ENST00000577539 TEX14Q8IWB6 1497 aa7.21□□□□□ -1.26
VAPA-203ENST00000577539 SRPK2P78362 688 aaKnown RBP7.21□□□□□ -1.26
VAPA-203ENST00000577539 PPP4R2Q9NY27 417 aa7.21□□□□□ -1.26
VAPA-203ENST00000577539 PTPRGP23470 1445 aa7.21□□□□□ -1.26
VAPA-203ENST00000577539 PZPP20742 1482 aa7.21□□□□□ -1.26
VAPA-203ENST00000577539 TRAIPQ9BWF2 469 aa7.2□□□□□ -1.26
VAPA-203ENST00000577539 SNRKQ9NRH2 765 aa7.2□□□□□ -1.26
VAPA-203ENST00000577539 MAP3K9P80192 1104 aa7.2□□□□□ -1.26
VAPA-203ENST00000577539 KIF15Q9NS87 1388 aa7.2□□□□□ -1.26
VAPA-203ENST00000577539 ZBED9Q6R2W3 1325 aa7.2□□□□□ -1.26
VAPA-203ENST00000577539 C9orf84Q5VXU9 1444 aa7.2□□□□□ -1.26
VAPA-203ENST00000577539 GOLGA2Q08379 1002 aa7.2□□□□□ -1.26
VAPA-203ENST00000577539 GPCPD1Q9NPB8 672 aa7.19□□□□□ -1.26
VAPA-203ENST00000577539 MYT1LQ9UL68 1186 aa7.19□□□□□ -1.26
VAPA-203ENST00000577539 MTMR14Q8NCE2 650 aa7.19□□□□□ -1.26
VAPA-203ENST00000577539 RGS22Q8NE09 1264 aa7.19□□□□□ -1.26
VAPA-203ENST00000577539 KIF14Q15058 1648 aa7.19□□□□□ -1.26
VAPA-203ENST00000577539 CEP170Q5SW79 1584 aa7.19□□□□□ -1.26
VAPA-203ENST00000577539 PXYLP1Q8TE99 480 aa7.18□□□□□ -1.26
VAPA-203ENST00000577539 ATP10BO94823 1461 aa7.18□□□□□ -1.26
VAPA-203ENST00000577539 PPP2R2DQ66LE6 453 aa7.18□□□□□ -1.26
VAPA-203ENST00000577539 PHF14O94880 888 aa7.18□□□□□ -1.26
VAPA-203ENST00000577539 SSTR3P32745 418 aaPredicted RBP7.18□□□□□ -1.26
VAPA-203ENST00000577539 FAM198AQ9UFP1 575 aa7.18□□□□□ -1.26
VAPA-203ENST00000577539 ADGRG1Q9Y653 693 aa7.18□□□□□ -1.26
VAPA-203ENST00000577539 SPATA31E1Q6ZUB1 1445 aa7.17□□□□□ -1.26
VAPA-203ENST00000577539 ADAMTS19Q8TE59 1207 aa7.17□□□□□ -1.26
VAPA-203ENST00000577539 ROCK2O75116 1388 aaKnown RBP7.17□□□□□ -1.26
VAPA-203ENST00000577539 TBC1D12O60347 775 aa7.17□□□□□ -1.26
VAPA-203ENST00000577539 TTLL12Q14166 644 aaPredicted RBP7.17□□□□□ -1.26
VAPA-203ENST00000577539 LIMD1Q9UGP4 676 aa7.17□□□□□ -1.26
VAPA-203ENST00000577539 NUP160Q12769 1436 aa7.16□□□□□ -1.26
VAPA-203ENST00000577539 MDM2Q00987 491 aaPredicted RBP7.16□□□□□ -1.26
VAPA-203ENST00000577539 CCDC136Q96JN2 1154 aa7.16□□□□□ -1.26
VAPA-203ENST00000577539 CCDC9Q9Y3X0 531 aaKnown RBP7.16□□□□□ -1.26
VAPA-203ENST00000577539 NBPF1Q3BBV0 1214 aa7.15□□□□□ -1.26
VAPA-203ENST00000577539 ERICH6BQ5W0A0 696 aa7.15□□□□□ -1.26
VAPA-203ENST00000577539 BEGAINQ9BUH8 593 aa7.15□□□□□ -1.26
VAPA-203ENST00000577539 NUDCQ9Y266 331 aa7.15□□□□□ -1.26
VAPA-203ENST00000577539 ITSN2Q9NZM3 1697 aa7.15□□□□□ -1.27
VAPA-203ENST00000577539 CC2D1BQ5T0F9 858 aaKnown RBP7.15□□□□□ -1.27
VAPA-203ENST00000577539 ADGRL2O95490 1459 aa7.14□□□□□ -1.27
VAPA-203ENST00000577539 CCDC144AA2RUR9 1427 aa7.14□□□□□ -1.27
VAPA-203ENST00000577539 DHX29Q7Z478 1369 aaKnown RBP7.14□□□□□ -1.27
VAPA-203ENST00000577539 SOCS7O14512 581 aa7.14□□□□□ -1.27
VAPA-203ENST00000577539 RSPH4AQ5TD94 716 aa7.14□□□□□ -1.27
VAPA-203ENST00000577539 PNISRQ8TF01 805 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms