RNA–Protein interactions for RNA: ENST00000576390.5

P4HB-223, Transcript of prolyl 4-hydroxylase subunit beta, human

TSL 4 BASIC

Gene P4HB, Length 439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
P4HB-223	ENST00000576390	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.24	■■■□□ 2.11
P4HB-223	ENST00000576390	ACIN1	Q9UKV3	1341 aa	Known RBP	28.23	■■■□□ 2.11
P4HB-223	ENST00000576390	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.22	■■■□□ 2.11
P4HB-223	ENST00000576390	LRPPRC	P42704	1394 aa	Known RBP	28.22	■■■□□ 2.11
P4HB-223	ENST00000576390	RXRB	P28702	533 aa		28.21	■■■□□ 2.11
P4HB-223	ENST00000576390	ABCC11	Q96J66	1382 aa		28.21	■■■□□ 2.11
P4HB-223	ENST00000576390	NRXN1	Q9ULB1	1477 aa		28.16	■■■□□ 2.1
P4HB-223	ENST00000576390	FMN2	Q9NZ56	1722 aa		28.16	■■■□□ 2.1
P4HB-223	ENST00000576390	C8orf37	Q96NL8	207 aa		28.16	■■■□□ 2.1
P4HB-223	ENST00000576390	WAPL	Q7Z5K2	1190 aa		28.15	■■■□□ 2.1
P4HB-223	ENST00000576390	PXDN	Q92626	1479 aa		28.15	■■■□□ 2.1
P4HB-223	ENST00000576390	TMEM132E	Q6IEE7	984 aa		28.14	■■■□□ 2.1
P4HB-223	ENST00000576390	STK26	Q9P289	416 aa		28.14	■■■□□ 2.1
P4HB-223	ENST00000576390	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.14	■■■□□ 2.1
P4HB-223	ENST00000576390	PLEKHH1	Q9ULM0	1364 aa		28.13	■■■□□ 2.09
P4HB-223	ENST00000576390	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.13	■■■□□ 2.09	9e-51	■■■■■ 66.5
P4HB-223	ENST00000576390	MYOM2	P54296	1465 aa		28.13	■■■□□ 2.09
P4HB-223	ENST00000576390	MARF1	Q9Y4F3	1742 aa	Known RBP	28.12	■■■□□ 2.09
P4HB-223	ENST00000576390	NPHP3	Q7Z494	1330 aa		28.12	■■■□□ 2.09
P4HB-223	ENST00000576390	ESCO1	Q5FWF5	840 aa		28.11	■■■□□ 2.09
P4HB-223	ENST00000576390	C14orf93	Q9H972	538 aa	Known RBP	28.1	■■■□□ 2.09
P4HB-223	ENST00000576390	RAB3GAP2	Q9H2M9	1393 aa		28.1	■■■□□ 2.09
P4HB-223	ENST00000576390	RGPD8	O14715	1765 aa	Predicted RBP	28.09	■■■□□ 2.09
P4HB-223	ENST00000576390	ADAMTS2	O95450	1211 aa		28.09	■■■□□ 2.09
P4HB-223	ENST00000576390	SIRT1	Q96EB6	747 aa		28.09	■■■□□ 2.09
P4HB-223	ENST00000576390	QTRT2	Q9H974	415 aa	Known RBP	28.09	■■■□□ 2.09
P4HB-223	ENST00000576390	RGS12	O14924	1447 aa		28.09	■■■□□ 2.09
P4HB-223	ENST00000576390	KIF1A	Q12756	1690 aa		28.08	■■■□□ 2.09
P4HB-223	ENST00000576390	RBM6	P78332	1123 aa	Known RBP	28.08	■■■□□ 2.09
P4HB-223	ENST00000576390	NGLY1	Q96IV0	654 aa		28.07	■■■□□ 2.08
P4HB-223	ENST00000576390	FOXO3	O43524	673 aa		28.04	■■■□□ 2.08
P4HB-223	ENST00000576390	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.03	■■■□□ 2.08
P4HB-223	ENST00000576390	NUTM2F	A1L443	756 aa		28.02	■■■□□ 2.08
P4HB-223	ENST00000576390	CFAP70	Q5T0N1	1121 aa		28.02	■■■□□ 2.08
P4HB-223	ENST00000576390	DHX57	Q6P158	1386 aa	Known RBP	28.01	■■■□□ 2.07
P4HB-223	ENST00000576390	XPC	Q01831	940 aa	Predicted RBP	28	■■■□□ 2.07
P4HB-223	ENST00000576390	USP21	Q9UK80	565 aa		28	■■■□□ 2.07
P4HB-223	ENST00000576390	DLC1	Q96QB1	1528 aa		28	■■■□□ 2.07
P4HB-223	ENST00000576390	ATRN	O75882	1429 aa		27.99	■■■□□ 2.07
P4HB-223	ENST00000576390	TRPC5	Q9UL62	973 aa	Predicted RBP	27.97	■■■□□ 2.07
P4HB-223	ENST00000576390	ADGRB1	O14514	1584 aa		27.97	■■■□□ 2.07
P4HB-223	ENST00000576390	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.96	■■■□□ 2.07
P4HB-223	ENST00000576390	BCL9L	Q86UU0	1499 aa		27.95	■■■□□ 2.06
P4HB-223	ENST00000576390	SPATA31A3	Q5VYP0	1347 aa		27.94	■■■□□ 2.06
P4HB-223	ENST00000576390	ADGRB2	O60241	1585 aa		27.94	■■■□□ 2.06
P4HB-223	ENST00000576390	USP32	Q8NFA0	1604 aa		27.93	■■■□□ 2.06
P4HB-223	ENST00000576390	PRAM1	Q96QH2	718 aa		27.91	■■■□□ 2.06
P4HB-223	ENST00000576390	HRC	P23327	699 aa		27.9	■■■□□ 2.06
P4HB-223	ENST00000576390	KRT28	Q7Z3Y7	464 aa		27.89	■■■□□ 2.06
P4HB-223	ENST00000576390	PHF8	Q9UPP1	1060 aa		27.89	■■■□□ 2.06
P4HB-223	ENST00000576390	ABCA3	Q99758	1704 aa		27.87	■■■□□ 2.05
P4HB-223	ENST00000576390	SLIT2	O94813	1529 aa		27.87	■■■□□ 2.05
P4HB-223	ENST00000576390	TNS3	Q68CZ2	1445 aa		27.86	■■■□□ 2.05
P4HB-223	ENST00000576390	ANKAR	Q7Z5J8	1434 aa		27.86	■■■□□ 2.05
P4HB-223	ENST00000576390	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.85	■■■□□ 2.05
P4HB-223	ENST00000576390	SBNO1	A3KN83	1393 aa		27.84	■■■□□ 2.05
P4HB-223	ENST00000576390	ATAD2	Q6PL18	1390 aa		27.84	■■■□□ 2.05
P4HB-223	ENST00000576390	STAC3	Q96MF2	364 aa		27.83	■■■□□ 2.05
P4HB-223	ENST00000576390	POGK	Q9P215	609 aa		27.83	■■■□□ 2.05
P4HB-223	ENST00000576390	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.82	■■■□□ 2.04
P4HB-223	ENST00000576390	PSME1	Q06323	249 aa		27.82	■■■□□ 2.04
P4HB-223	ENST00000576390	DCAF11	Q8TEB1	546 aa		27.81	■■■□□ 2.04
P4HB-223	ENST00000576390	GLI3	P10071	1580 aa		27.81	■■■□□ 2.04
P4HB-223	ENST00000576390	GJD4	Q96KN9	370 aa	Predicted RBP	27.8	■■■□□ 2.04
P4HB-223	ENST00000576390	TRAK1	Q9UPV9	953 aa		27.8	■■■□□ 2.04
P4HB-223	ENST00000576390	PLCH1	Q4KWH8	1693 aa		27.8	■■■□□ 2.04
P4HB-223	ENST00000576390	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.8	■■■□□ 2.04
P4HB-223	ENST00000576390	NWD2	Q9ULI1	1742 aa		27.8	■■■□□ 2.04
P4HB-223	ENST00000576390	KDM2A	Q9Y2K7	1162 aa		27.79	■■■□□ 2.04
P4HB-223	ENST00000576390	UNC5CL	Q8IV45	518 aa		27.78	■■■□□ 2.04
P4HB-223	ENST00000576390	TULP4	Q9NRJ4	1543 aa		27.77	■■■□□ 2.04
P4HB-223	ENST00000576390	ALS2	Q96Q42	1657 aa		27.77	■■■□□ 2.04
P4HB-223	ENST00000576390	ARHGEF10	O15013	1369 aa		27.76	■■■□□ 2.03
P4HB-223	ENST00000576390	BRWD3	Q6RI45	1802 aa		27.76	■■■□□ 2.03
P4HB-223	ENST00000576390	RALGAPB	Q86X10	1494 aa		27.76	■■■□□ 2.03
P4HB-223	ENST00000576390	PRR36	Q9H6K5	1346 aa		27.74	■■■□□ 2.03
P4HB-223	ENST00000576390	PMFBP1	Q8TBY8	1022 aa		27.74	■■■□□ 2.03
P4HB-223	ENST00000576390	EIF3A	Q14152	1382 aa	Known RBP	27.73	■■■□□ 2.03
P4HB-223	ENST00000576390	CABLES1	Q8TDN4	633 aa		27.73	■■■□□ 2.03
P4HB-223	ENST00000576390	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.73	■■■□□ 2.03
P4HB-223	ENST00000576390	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.72	■■■□□ 2.03
P4HB-223	ENST00000576390	KIAA1210	Q9ULL0	1709 aa		27.72	■■■□□ 2.03
P4HB-223	ENST00000576390	ITSN1	Q15811	1721 aa		27.71	■■■□□ 2.03
P4HB-223	ENST00000576390	CRYBG1	Q9Y4K1	1723 aa		27.7	■■■□□ 2.03
P4HB-223	ENST00000576390	WASL	O00401	505 aa	Predicted RBP	27.7	■■■□□ 2.02
P4HB-223	ENST00000576390	NRAP	Q86VF7	1730 aa		27.69	■■■□□ 2.02
P4HB-223	ENST00000576390	EP400	Q96L91	3159 aa		27.68	■■■□□ 2.02
P4HB-223	ENST00000576390	HAP1	P54257	671 aa	Predicted RBP	27.68	■■■□□ 2.02
P4HB-223	ENST00000576390	VPS72	Q15906	364 aa		27.66	■■■□□ 2.02
P4HB-223	ENST00000576390	LMOD2	Q6P5Q4	547 aa		27.66	■■■□□ 2.02
P4HB-223	ENST00000576390	GPRASP1	Q5JY77	1395 aa		27.65	■■■□□ 2.02
P4HB-223	ENST00000576390	CCDC125	Q86Z20	511 aa		27.65	■■■□□ 2.02
P4HB-223	ENST00000576390	ATP7B	P35670	1465 aa		27.64	■■■□□ 2.02
P4HB-223	ENST00000576390	COL14A1	Q05707	1796 aa	Known RBP	27.63	■■■□□ 2.01
P4HB-223	ENST00000576390	FAM83G	A6ND36	823 aa		27.63	■■■□□ 2.01
P4HB-223	ENST00000576390	TOPAZ1	Q8N9V7	1692 aa		27.62	■■■□□ 2.01
P4HB-223	ENST00000576390	ONECUT3	O60422	494 aa	Predicted RBP	27.61	■■■□□ 2.01
P4HB-223	ENST00000576390	PLEKHG5	O94827	1062 aa		27.61	■■■□□ 2.01
P4HB-223	ENST00000576390	SEPT12	Q8IYM1	358 aa		27.57	■■■□□ 2
P4HB-223	ENST00000576390	NGDN	Q8NEJ9	315 aa	Known RBP	27.57	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms