RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
RAB40B-211ENST00000576359 SHPRHQ149N8 1683 aa18.55■□□□□ 0.56
RAB40B-211ENST00000576359 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
RAB40B-211ENST00000576359 APAF1O14727 1248 aa18.53■□□□□ 0.56
RAB40B-211ENST00000576359 GOLGA2Q08379 1002 aa18.53■□□□□ 0.56
RAB40B-211ENST00000576359 AGLP35573 1532 aa18.53■□□□□ 0.56
RAB40B-211ENST00000576359 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
RAB40B-211ENST00000576359 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.56
RAB40B-211ENST00000576359 MORC1Q86VD1 984 aa18.52■□□□□ 0.56
RAB40B-211ENST00000576359 PTPRMP28827 1452 aa18.52■□□□□ 0.56
RAB40B-211ENST00000576359 CLTCQ00610 1675 aaKnown RBP18.51■□□□□ 0.55
RAB40B-211ENST00000576359 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
RAB40B-211ENST00000576359 STK26Q9P289 416 aa18.51■□□□□ 0.55
RAB40B-211ENST00000576359 TNNT2P45379 298 aaPredicted RBP18.51■□□□□ 0.55
RAB40B-211ENST00000576359 SLFN5Q08AF3 891 aa18.51■□□□□ 0.55
RAB40B-211ENST00000576359 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
RAB40B-211ENST00000576359 SPINK5Q9NQ38 1064 aaPredicted RBP18.5■□□□□ 0.55
RAB40B-211ENST00000576359 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
RAB40B-211ENST00000576359 ERICH6Q7L0X2 663 aa18.49■□□□□ 0.55
RAB40B-211ENST00000576359 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
RAB40B-211ENST00000576359 CGNL1Q0VF96 1302 aa18.48■□□□□ 0.55
RAB40B-211ENST00000576359 ALKQ9UM73 1620 aa18.48■□□□□ 0.55
RAB40B-211ENST00000576359 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
RAB40B-211ENST00000576359 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
RAB40B-211ENST00000576359 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
RAB40B-211ENST00000576359 SPATA31D1Q6ZQQ2 1576 aa18.46■□□□□ 0.55
RAB40B-211ENST00000576359 PRAM1Q96QH2 718 aa18.45■□□□□ 0.54
RAB40B-211ENST00000576359 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
RAB40B-211ENST00000576359 A0A1W2PP64 1363 aa18.44■□□□□ 0.54
RAB40B-211ENST00000576359 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
RAB40B-211ENST00000576359 A2ML1A8K2U0 1454 aa18.44■□□□□ 0.54
RAB40B-211ENST00000576359 MTHFSP49914 203 aa18.44■□□□□ 0.54
RAB40B-211ENST00000576359 MINK1Q8N4C8 1332 aaPredicted RBP18.43■□□□□ 0.54
RAB40B-211ENST00000576359 NSD2O96028 1365 aa18.43■□□□□ 0.54
RAB40B-211ENST00000576359 NKTRP30414 1462 aaKnown RBP18.43■□□□□ 0.54
RAB40B-211ENST00000576359 ARHGEF40Q8TER5 1519 aa18.43■□□□□ 0.54
RAB40B-211ENST00000576359 IQSEC2Q5JU85 1478 aa18.42■□□□□ 0.54
RAB40B-211ENST00000576359 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
RAB40B-211ENST00000576359 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
RAB40B-211ENST00000576359 ABCC11Q96J66 1382 aa18.42■□□□□ 0.54
RAB40B-211ENST00000576359 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
RAB40B-211ENST00000576359 CD163L1Q9NR16 1453 aa18.41■□□□□ 0.54
RAB40B-211ENST00000576359 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
RAB40B-211ENST00000576359 MLECQ14165 292 aa18.41■□□□□ 0.54
RAB40B-211ENST00000576359 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
RAB40B-211ENST00000576359 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
RAB40B-211ENST00000576359 E9PSI1 815 aa18.4■□□□□ 0.54
RAB40B-211ENST00000576359 WWC1Q8IX03 1113 aa18.4■□□□□ 0.54
RAB40B-211ENST00000576359 POGKQ9P215 609 aa18.39■□□□□ 0.53
RAB40B-211ENST00000576359 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
RAB40B-211ENST00000576359 RUNDC1Q96C34 613 aa18.38■□□□□ 0.53
RAB40B-211ENST00000576359 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
RAB40B-211ENST00000576359 ANP32AP39687 249 aaKnown RBP18.38■□□□□ 0.53
RAB40B-211ENST00000576359 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
RAB40B-211ENST00000576359 NOP58Q9Y2X3 529 aaKnown RBP18.36■□□□□ 0.53
RAB40B-211ENST00000576359 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
RAB40B-211ENST00000576359 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
RAB40B-211ENST00000576359 TCP11L2Q8N4U5 519 aa18.35■□□□□ 0.53
RAB40B-211ENST00000576359 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
RAB40B-211ENST00000576359 BCAR3O75815 825 aa18.35■□□□□ 0.53
RAB40B-211ENST00000576359 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
RAB40B-211ENST00000576359 NRXN3Q9Y4C0 1643 aa18.35■□□□□ 0.53
RAB40B-211ENST00000576359 DLC1Q96QB1 1528 aa18.35■□□□□ 0.53
RAB40B-211ENST00000576359 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
RAB40B-211ENST00000576359 CDK19Q9BWU1 502 aa18.34■□□□□ 0.53
RAB40B-211ENST00000576359 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.34■□□□□ 0.53
RAB40B-211ENST00000576359 MS4A1P11836 297 aa18.33■□□□□ 0.53
RAB40B-211ENST00000576359 FYB1O15117 783 aa18.33■□□□□ 0.52
RAB40B-211ENST00000576359 SKAP1Q86WV1 359 aa18.33■□□□□ 0.52
RAB40B-211ENST00000576359 IPO9Q96P70 1041 aaKnown RBP18.33■□□□□ 0.52
RAB40B-211ENST00000576359 KDM2BQ8NHM5 1336 aa18.33■□□□□ 0.52
RAB40B-211ENST00000576359 PDE4AP27815 886 aa18.32■□□□□ 0.52
RAB40B-211ENST00000576359 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
RAB40B-211ENST00000576359 COL3A1P02461 1466 aaPredicted RBP18.32■□□□□ 0.52
RAB40B-211ENST00000576359 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
RAB40B-211ENST00000576359 WAPLQ7Z5K2 1190 aa18.32■□□□□ 0.52
RAB40B-211ENST00000576359 MED14O60244 1454 aa18.32■□□□□ 0.52
RAB40B-211ENST00000576359 ADGRB2O60241 1585 aa18.31■□□□□ 0.52
RAB40B-211ENST00000576359 ZMYM3Q14202 1370 aa18.31■□□□□ 0.52
RAB40B-211ENST00000576359 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
RAB40B-211ENST00000576359 CABP1Q9NZU7 370 aa18.3■□□□□ 0.52
RAB40B-211ENST00000576359 U2AF1L5P0DN76 240 aaPredicted RBP18.29■□□□□ 0.52
RAB40B-211ENST00000576359 U2AF1Q01081 240 aaKnown RBP eCLIP18.29■□□□□ 0.52
RAB40B-211ENST00000576359 KIF20BQ96Q89 1820 aa18.29■□□□□ 0.52
RAB40B-211ENST00000576359 METP08581 1390 aa18.28■□□□□ 0.52
RAB40B-211ENST00000576359 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
RAB40B-211ENST00000576359 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.52
RAB40B-211ENST00000576359 WDR63Q8IWG1 891 aa18.27■□□□□ 0.52
RAB40B-211ENST00000576359 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
RAB40B-211ENST00000576359 NPM2Q86SE8 214 aaKnown RBP18.26■□□□□ 0.51
RAB40B-211ENST00000576359 PLEKHF1Q96S99 279 aa18.25■□□□□ 0.51
RAB40B-211ENST00000576359 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
RAB40B-211ENST00000576359 ATP7BP35670 1465 aa18.24■□□□□ 0.51
RAB40B-211ENST00000576359 ESF1Q9H501 851 aaKnown RBP18.24■□□□□ 0.51
RAB40B-211ENST00000576359 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
RAB40B-211ENST00000576359 U2SURPO15042 1029 aaKnown RBP18.23■□□□□ 0.51
RAB40B-211ENST00000576359 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.23■□□□□ 0.51
RAB40B-211ENST00000576359 RARSP54136 660 aaKnown RBP18.22■□□□□ 0.51
RAB40B-211ENST00000576359 TNRQ92752 1358 aa18.22■□□□□ 0.51
RAB40B-211ENST00000576359 KNDC1Q76NI1 1749 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms