RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 DISP3Q9P2K9 1392 aa22.88■■□□□ 1.25
ERCC4-208ENST00000576348 QRICH2Q9H0J4 1663 aa22.85■■□□□ 1.25
ERCC4-208ENST00000576348 C14orf37Q86TY3 774 aa22.85■■□□□ 1.25
ERCC4-208ENST00000576348 SRPK2P78362 688 aaKnown RBP22.84■■□□□ 1.25
ERCC4-208ENST00000576348 PROSER2Q86WR7 435 aaPredicted RBP22.84■■□□□ 1.25
ERCC4-208ENST00000576348 XRN1Q8IZH2 1706 aaKnown RBP22.84■■□□□ 1.25
ERCC4-208ENST00000576348 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
ERCC4-208ENST00000576348 DDX10Q13206 875 aaKnown RBP22.83■■□□□ 1.25
ERCC4-208ENST00000576348 NKTRP30414 1462 aaKnown RBP22.8■■□□□ 1.24
ERCC4-208ENST00000576348 CDK19Q9BWU1 502 aa22.8■■□□□ 1.24
ERCC4-208ENST00000576348 NWD1Q149M9 1564 aa22.8■■□□□ 1.24
ERCC4-208ENST00000576348 WASLO00401 505 aaPredicted RBP22.78■■□□□ 1.24
ERCC4-208ENST00000576348 CABP2Q9NPB3 220 aa22.78■■□□□ 1.24
ERCC4-208ENST00000576348 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.24
ERCC4-208ENST00000576348 PUS7Q96PZ0 661 aaKnown RBP22.77■■□□□ 1.24
ERCC4-208ENST00000576348 CHD2O14647 1828 aaKnown RBP22.77■■□□□ 1.24
ERCC4-208ENST00000576348 TMC1Q8TDI8 760 aa22.76■■□□□ 1.23
ERCC4-208ENST00000576348 TULP4Q9NRJ4 1543 aa22.76■■□□□ 1.23
ERCC4-208ENST00000576348 ZNF335Q9H4Z2 1342 aaPredicted RBP22.76■■□□□ 1.23
ERCC4-208ENST00000576348 RBM33Q96EV2 1170 aaKnown RBP22.75■■□□□ 1.23
ERCC4-208ENST00000576348 ATAD2Q6PL18 1390 aa22.75■■□□□ 1.23
ERCC4-208ENST00000576348 TMEM94Q12767 1356 aa22.71■■□□□ 1.23
ERCC4-208ENST00000576348 ADGRL3Q9HAR2 1447 aa22.71■■□□□ 1.23
ERCC4-208ENST00000576348 ADGRB2O60241 1585 aa22.69■■□□□ 1.22
ERCC4-208ENST00000576348 NUTM2FA1L443 756 aa22.68■■□□□ 1.22
ERCC4-208ENST00000576348 NUDT16Q96DE0 195 aaKnown RBP22.68■■□□□ 1.22
ERCC4-208ENST00000576348 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
ERCC4-208ENST00000576348 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
ERCC4-208ENST00000576348 NINLQ9Y2I6 1382 aa22.67■■□□□ 1.22
ERCC4-208ENST00000576348 ATF3P18847 181 aa22.66■■□□□ 1.22
ERCC4-208ENST00000576348 C19orf44Q9H6X5 657 aa22.66■■□□□ 1.22
ERCC4-208ENST00000576348 PANK3Q9H999 370 aa22.66■■□□□ 1.22
ERCC4-208ENST00000576348 SLC12A5Q9H2X9 1139 aa22.65■■□□□ 1.22
ERCC4-208ENST00000576348 MSH6P52701 1360 aa22.64■■□□□ 1.22
ERCC4-208ENST00000576348 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.21
ERCC4-208ENST00000576348 CCDC61Q9Y6R9 512 aa22.64■■□□□ 1.21
ERCC4-208ENST00000576348 HDGFL2Q7Z4V5 671 aaPredicted RBP22.63■■□□□ 1.21
ERCC4-208ENST00000576348 CABP1Q9NZU7 370 aa22.63■■□□□ 1.21
ERCC4-208ENST00000576348 CDC42BPGQ6DT37 1551 aa22.63■■□□□ 1.21
ERCC4-208ENST00000576348 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
ERCC4-208ENST00000576348 PPIP5K1Q6PFW1 1433 aa22.61■■□□□ 1.21
ERCC4-208ENST00000576348 ANKARQ7Z5J8 1434 aa22.61■■□□□ 1.21
ERCC4-208ENST00000576348 CADPS2Q86UW7 1296 aa22.6■■□□□ 1.21
ERCC4-208ENST00000576348 KNSTRNQ9Y448 316 aa22.6■■□□□ 1.21
ERCC4-208ENST00000576348 STRCP1A6NGW2 1772 aa22.6■■□□□ 1.21
ERCC4-208ENST00000576348 NALCNQ8IZF0 1738 aa22.6■■□□□ 1.21
ERCC4-208ENST00000576348 PRR36Q9H6K5 1346 aa22.59■■□□□ 1.21
ERCC4-208ENST00000576348 ATP7BP35670 1465 aa22.59■■□□□ 1.21
ERCC4-208ENST00000576348 ANP32CO43423 234 aa22.58■■□□□ 1.21
ERCC4-208ENST00000576348 DCCP43146 1447 aa22.57■■□□□ 1.2
ERCC4-208ENST00000576348 ANKRD36BQ8N2N9 1353 aa22.57■■□□□ 1.2
ERCC4-208ENST00000576348 CNGB1Q14028 1251 aaPredicted RBP22.55■■□□□ 1.2
ERCC4-208ENST00000576348 ESCO1Q5FWF5 840 aa22.54■■□□□ 1.2
ERCC4-208ENST00000576348 NGDNQ8NEJ9 315 aaKnown RBP22.54■■□□□ 1.2
ERCC4-208ENST00000576348 MYOM1P52179 1685 aa22.53■■□□□ 1.2
ERCC4-208ENST00000576348 PLEKHG3A1L390 1219 aa22.53■■□□□ 1.2
ERCC4-208ENST00000576348 PMFBP1Q8TBY8 1022 aa22.53■■□□□ 1.2
ERCC4-208ENST00000576348 FMN2Q9NZ56 1722 aa22.53■■□□□ 1.2
ERCC4-208ENST00000576348 A0A1W2PP64 1363 aa22.52■■□□□ 1.2
ERCC4-208ENST00000576348 NSD3Q9BZ95 1437 aa22.52■■□□□ 1.2
ERCC4-208ENST00000576348 PHF8Q9UPP1 1060 aa22.52■■□□□ 1.2
ERCC4-208ENST00000576348 KTN1Q86UP2 1357 aaKnown RBP22.51■■□□□ 1.19
ERCC4-208ENST00000576348 ZNF692Q9BU19 519 aaPredicted RBP22.51■■□□□ 1.19
ERCC4-208ENST00000576348 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
ERCC4-208ENST00000576348 ACEP12821 1306 aa22.5■■□□□ 1.19
ERCC4-208ENST00000576348 PER1O15534 1290 aaPredicted RBP22.49■■□□□ 1.19
ERCC4-208ENST00000576348 C1orf167Q5SNV9 1468 aa22.48■■□□□ 1.19
ERCC4-208ENST00000576348 LTBP4Q8N2S1 1624 aa22.48■■□□□ 1.19
ERCC4-208ENST00000576348 CGNL1Q0VF96 1302 aa22.48■■□□□ 1.19
ERCC4-208ENST00000576348 CC2D1BQ5T0F9 858 aaKnown RBP22.47■■□□□ 1.19
ERCC4-208ENST00000576348 MST1RQ04912 1400 aa22.47■■□□□ 1.19
ERCC4-208ENST00000576348 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
ERCC4-208ENST00000576348 ORAI2Q96SN7 254 aa22.46■■□□□ 1.19
ERCC4-208ENST00000576348 CD163L1Q9NR16 1453 aa22.46■■□□□ 1.19
ERCC4-208ENST00000576348 ITSN1Q15811 1721 aa22.45■■□□□ 1.19
ERCC4-208ENST00000576348 CPSF1Q10570 1443 aaKnown RBP22.45■■□□□ 1.18
ERCC4-208ENST00000576348 TOPAZ1Q8N9V7 1692 aa22.45■■□□□ 1.18
ERCC4-208ENST00000576348 PSME1Q06323 249 aa22.44■■□□□ 1.18
ERCC4-208ENST00000576348 EDC4Q6P2E9 1401 aaKnown RBP22.44■■□□□ 1.18
ERCC4-208ENST00000576348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.44■■□□□ 1.18
ERCC4-208ENST00000576348 MIER1Q8N108 512 aa22.44■■□□□ 1.18
ERCC4-208ENST00000576348 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
ERCC4-208ENST00000576348 POLR3AO14802 1390 aaPredicted RBP22.43■■□□□ 1.18
ERCC4-208ENST00000576348 AMER1Q5JTC6 1135 aaPredicted RBP22.43■■□□□ 1.18
ERCC4-208ENST00000576348 RALBP1Q15311 655 aa22.42■■□□□ 1.18
ERCC4-208ENST00000576348 PRKRIP1Q9H875 184 aaPredicted RBP22.41■■□□□ 1.18
ERCC4-208ENST00000576348 USP6P35125 1406 aa22.4■■□□□ 1.18
ERCC4-208ENST00000576348 NSD2O96028 1365 aa22.4■■□□□ 1.18
ERCC4-208ENST00000576348 NPC1L1Q9UHC9 1359 aa22.4■■□□□ 1.18
ERCC4-208ENST00000576348 MORC1Q86VD1 984 aa22.4■■□□□ 1.18
ERCC4-208ENST00000576348 XIRP1Q702N8 1843 aaKnown RBP22.4■■□□□ 1.18
ERCC4-208ENST00000576348 FOXO3O43524 673 aa22.39■■□□□ 1.17
ERCC4-208ENST00000576348 PAK3O75914 559 aaPredicted RBP22.38■■□□□ 1.17
ERCC4-208ENST00000576348 TTC21BQ7Z4L5 1316 aa22.37■■□□□ 1.17
ERCC4-208ENST00000576348 GGNBP2Q9H3C7 697 aa22.37■■□□□ 1.17
ERCC4-208ENST00000576348 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
ERCC4-208ENST00000576348 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
ERCC4-208ENST00000576348 TTC21AQ8NDW8 1320 aa22.36■■□□□ 1.17
ERCC4-208ENST00000576348 TOM1O60784 492 aa22.36■■□□□ 1.17
ERCC4-208ENST00000576348 BRINP3Q76B58 766 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms