RNA–Protein interactions for RNA: ENST00000576274.2

NDC80-205, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 3

Gene NDC80, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-205ENST00000576274 PRDM9Q9NQV7 894 aa13.33□□□□□ -0.28
NDC80-205ENST00000576274 PLEKHG3A1L390 1219 aa13.32□□□□□ -0.28
NDC80-205ENST00000576274 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
NDC80-205ENST00000576274 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
NDC80-205ENST00000576274 GGCXP38435 758 aa13.31□□□□□ -0.28
NDC80-205ENST00000576274 RIC3Q7Z5B4 369 aa13.31□□□□□ -0.28
NDC80-205ENST00000576274 PCDHB15Q9Y5E8 787 aa13.31□□□□□ -0.28
NDC80-205ENST00000576274 SPTLC1O15269 473 aa13.3□□□□□ -0.28
NDC80-205ENST00000576274 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
NDC80-205ENST00000576274 USB1Q9BQ65 265 aaKnown RBP13.3□□□□□ -0.28
NDC80-205ENST00000576274 C6orf229H3BNL8 230 aa13.29□□□□□ -0.28
NDC80-205ENST00000576274 LIMD1Q9UGP4 676 aa13.29□□□□□ -0.28
NDC80-205ENST00000576274 GJA5P36382 358 aa13.27□□□□□ -0.29
NDC80-205ENST00000576274 CSPP1Q1MSJ5 1256 aa13.27□□□□□ -0.29
NDC80-205ENST00000576274 MSS51Q4VC12 460 aa13.27□□□□□ -0.29
NDC80-205ENST00000576274 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.29
NDC80-205ENST00000576274 IL27Q8NEV9 243 aa13.26□□□□□ -0.29
NDC80-205ENST00000576274 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
NDC80-205ENST00000576274 RETREG3Q86VR2 466 aa13.24□□□□□ -0.29
NDC80-205ENST00000576274 CLK2P49760 499 aaKnown RBP13.23□□□□□ -0.29
NDC80-205ENST00000576274 MTMR2Q13614 643 aa13.23□□□□□ -0.29
NDC80-205ENST00000576274 CABLES1Q8TDN4 633 aa13.23□□□□□ -0.29
NDC80-205ENST00000576274 ANKLE1Q8NAG6 615 aa13.22□□□□□ -0.29
NDC80-205ENST00000576274 HRCP23327 699 aa13.21□□□□□ -0.29
NDC80-205ENST00000576274 QPCTQ16769 361 aa13.21□□□□□ -0.29
NDC80-205ENST00000576274 SH3D19Q5HYK7 790 aa13.21□□□□□ -0.29
NDC80-205ENST00000576274 PLA2G2CQ5R387 149 aa13.21□□□□□ -0.29
NDC80-205ENST00000576274 RGS20O76081 388 aa13.2□□□□□ -0.3
NDC80-205ENST00000576274 MMP16P51512 607 aa13.2□□□□□ -0.3
NDC80-205ENST00000576274 SKIV2LQ15477 1246 aaKnown RBP13.2□□□□□ -0.3
NDC80-205ENST00000576274 EMID1Q96A84 441 aaPredicted RBP13.2□□□□□ -0.3
NDC80-205ENST00000576274 PRKD2Q9BZL6 878 aa13.2□□□□□ -0.3
NDC80-205ENST00000576274 FCF1Q9Y324 198 aaKnown RBP13.2□□□□□ -0.3
NDC80-205ENST00000576274 DXOO77932 396 aaKnown RBP13.19□□□□□ -0.3
NDC80-205ENST00000576274 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
NDC80-205ENST00000576274 PRR7Q8TB68 274 aa13.19□□□□□ -0.3
NDC80-205ENST00000576274 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
NDC80-205ENST00000576274 JUNDP17535 347 aa13.17□□□□□ -0.3
NDC80-205ENST00000576274 TUSC1Q2TAM9 212 aa13.17□□□□□ -0.3
NDC80-205ENST00000576274 PRPF38BQ5VTL8 546 aaKnown RBP13.17□□□□□ -0.3
NDC80-205ENST00000576274 SPDYE5A6NIY4 337 aa13.16□□□□□ -0.3
NDC80-205ENST00000576274 CFAP99D6REC4 459 aa13.16□□□□□ -0.3
NDC80-205ENST00000576274 LILRB3O75022 631 aa13.16□□□□□ -0.3
NDC80-205ENST00000576274 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
NDC80-205ENST00000576274 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
NDC80-205ENST00000576274 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
NDC80-205ENST00000576274 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
NDC80-205ENST00000576274 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
NDC80-205ENST00000576274 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
NDC80-205ENST00000576274 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
NDC80-205ENST00000576274 ATP1B4Q9UN42 357 aaPredicted RBP13.14□□□□□ -0.31
NDC80-205ENST00000576274 SLC19A1P41440 591 aa13.13□□□□□ -0.31
NDC80-205ENST00000576274 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
NDC80-205ENST00000576274 V9GY48 417 aaPredicted RBP13.12□□□□□ -0.31
NDC80-205ENST00000576274 CCDC24Q8N4L8 307 aa13.11□□□□□ -0.31
NDC80-205ENST00000576274 TSC1Q92574 1164 aa13.09□□□□□ -0.31
NDC80-205ENST00000576274 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
NDC80-205ENST00000576274 DESI1Q6ICB0 168 aa13.08□□□□□ -0.32
NDC80-205ENST00000576274 NUDT12Q9BQG2 462 aa13.08□□□□□ -0.32
NDC80-205ENST00000576274 PTPRNQ16849 979 aa13.06□□□□□ -0.32
NDC80-205ENST00000576274 SPRYD7Q5W111 196 aa13.06□□□□□ -0.32
NDC80-205ENST00000576274 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
NDC80-205ENST00000576274 PER1O15534 1290 aaPredicted RBP13.04□□□□□ -0.32
NDC80-205ENST00000576274 CCNYL3P0C7X3 344 aa13.04□□□□□ -0.32
NDC80-205ENST00000576274 PTCRAQ6ISU1 281 aaPredicted RBP13.04□□□□□ -0.32
NDC80-205ENST00000576274 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
NDC80-205ENST00000576274 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
NDC80-205ENST00000576274 RPIAP49247 311 aa13.03□□□□□ -0.32
NDC80-205ENST00000576274 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
NDC80-205ENST00000576274 ZNF598Q86UK7 904 aaKnown RBP13.01□□□□□ -0.33
NDC80-205ENST00000576274 EVA1BQ9NVM1 165 aa13.01□□□□□ -0.33
NDC80-205ENST00000576274 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
NDC80-205ENST00000576274 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
NDC80-205ENST00000576274 CTDSPL2Q05D32 466 aa12.99□□□□□ -0.33
NDC80-205ENST00000576274 TRIM32Q13049 653 aa12.99□□□□□ -0.33
NDC80-205ENST00000576274 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
NDC80-205ENST00000576274 KCNH2Q12809 1159 aa12.98□□□□□ -0.33
NDC80-205ENST00000576274 CTHP32929 405 aa12.97□□□□□ -0.33
NDC80-205ENST00000576274 RFC5P40937 340 aa12.97□□□□□ -0.33
NDC80-205ENST00000576274 MAP10Q9P2G4 905 aa12.97□□□□□ -0.33
NDC80-205ENST00000576274 AP1G2O75843 785 aa12.96□□□□□ -0.33
NDC80-205ENST00000576274 F12P00748 615 aaPredicted RBP12.96□□□□□ -0.33
NDC80-205ENST00000576274 TRIM67Q6ZTA4 783 aa12.96□□□□□ -0.33
NDC80-205ENST00000576274 IRX2Q9BZI1 471 aaPredicted RBP12.96□□□□□ -0.33
NDC80-205ENST00000576274 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
NDC80-205ENST00000576274 LRRN4Q8WUT4 740 aa12.94□□□□□ -0.34
NDC80-205ENST00000576274 FOXC1Q12948 553 aa12.93□□□□□ -0.34
NDC80-205ENST00000576274 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
NDC80-205ENST00000576274 TNFRSF10AO00220 468 aa12.92□□□□□ -0.34
NDC80-205ENST00000576274 SKOR1P84550 965 aa12.92□□□□□ -0.34
NDC80-205ENST00000576274 PKD2L1Q9P0L9 805 aa12.92□□□□□ -0.34
NDC80-205ENST00000576274 GDF9O60383 454 aa12.91□□□□□ -0.34
NDC80-205ENST00000576274 GFRA3O60609 400 aa12.91□□□□□ -0.34
NDC80-205ENST00000576274 BAP1Q92560 729 aa12.9□□□□□ -0.34
NDC80-205ENST00000576274 LINC01559Q495D7 138 aa12.89□□□□□ -0.35
NDC80-205ENST00000576274 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
NDC80-205ENST00000576274 SH3BP2P78314 561 aa12.87□□□□□ -0.35
NDC80-205ENST00000576274 WNT7BP56706 349 aa12.86□□□□□ -0.35
NDC80-205ENST00000576274 PRR20EP86478 221 aa12.86□□□□□ -0.35
NDC80-205ENST00000576274 PRR20CP86479 221 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms