RNA–Protein interactions for RNA: ENST00000575978.1

EIF4A3-206, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 3,593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-206ENST00000575978 PKNOX2Q96KN3 472 aa10.71□□□□□ -0.69
EIF4A3-206ENST00000575978 CD109Q6YHK3 1445 aa10.71□□□□□ -0.69
EIF4A3-206ENST00000575978 SLFN5Q08AF3 891 aa10.71□□□□□ -0.69
EIF4A3-206ENST00000575978 KIDINS220Q9ULH0 1771 aa10.71□□□□□ -0.7
EIF4A3-206ENST00000575978 SHPRHQ149N8 1683 aa10.7□□□□□ -0.7
EIF4A3-206ENST00000575978 NEURL4Q96JN8 1562 aa10.7□□□□□ -0.7
EIF4A3-206ENST00000575978 ZBTB22O15209 634 aa10.7□□□□□ -0.7
EIF4A3-206ENST00000575978 NPC1L1Q9UHC9 1359 aa10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 ASXL2Q76L83 1435 aa10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 MYO3AQ8NEV4 1616 aa10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 FRAT1Q92837 279 aaPredicted RBP10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 LAS1LQ9Y4W2 734 aaKnown RBP10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 NRXN1Q9ULB1 1477 aa10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 KIF1BO60333 1816 aa10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 MYOM2P54296 1465 aa10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 APAF1O14727 1248 aa10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 BCAR3O75815 825 aa10.69□□□□□ -0.7
EIF4A3-206ENST00000575978 EFCAB6Q5THR3 1501 aa10.68□□□□□ -0.7
EIF4A3-206ENST00000575978 ZC3H13Q5T200 1668 aaKnown RBP10.68□□□□□ -0.7
EIF4A3-206ENST00000575978 CFAP65Q6ZU64 1925 aaKnown RBP10.68□□□□□ -0.7
EIF4A3-206ENST00000575978 U2AF1L5P0DN76 240 aaPredicted RBP10.68□□□□□ -0.7
EIF4A3-206ENST00000575978 U2AF1Q01081 240 aaKnown RBP eCLIP10.68□□□□□ -0.7
EIF4A3-206ENST00000575978 C8orf34Q49A92 452 aa10.67□□□□□ -0.7
EIF4A3-206ENST00000575978 EVC2Q86UK5 1308 aa10.67□□□□□ -0.7
EIF4A3-206ENST00000575978 MAPK8IP3Q9UPT6 1336 aa10.67□□□□□ -0.7
EIF4A3-206ENST00000575978 SLC12A5Q9H2X9 1139 aa10.66□□□□□ -0.7
EIF4A3-206ENST00000575978 SLC4A3P48751 1232 aa10.66□□□□□ -0.7
EIF4A3-206ENST00000575978 TMEM132AQ24JP5 1023 aa10.66□□□□□ -0.7
EIF4A3-206ENST00000575978 HDGFL2Q7Z4V5 671 aaPredicted RBP10.66□□□□□ -0.7
EIF4A3-206ENST00000575978 TERF2IPQ9NYB0 399 aa10.65□□□□□ -0.7
EIF4A3-206ENST00000575978 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
EIF4A3-206ENST00000575978 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
EIF4A3-206ENST00000575978 CGNL1Q0VF96 1302 aa10.65□□□□□ -0.7
EIF4A3-206ENST00000575978 ADGRB3O60242 1522 aa10.65□□□□□ -0.7
EIF4A3-206ENST00000575978 FRMPD1Q5SYB0 1578 aa10.65□□□□□ -0.7
EIF4A3-206ENST00000575978 PPLO60437 1756 aa10.64□□□□□ -0.71
EIF4A3-206ENST00000575978 IGHDP01880 384 aa10.64□□□□□ -0.71
EIF4A3-206ENST00000575978 RRP7AQ9Y3A4 280 aaKnown RBP10.64□□□□□ -0.71
EIF4A3-206ENST00000575978 NKTRP30414 1462 aaKnown RBP10.64□□□□□ -0.71
EIF4A3-206ENST00000575978 ADGRB1O14514 1584 aa10.64□□□□□ -0.71
EIF4A3-206ENST00000575978 NOS1P29475 1434 aa10.64□□□□□ -0.71
EIF4A3-206ENST00000575978 RGS3P49796 1198 aa10.64□□□□□ -0.71
EIF4A3-206ENST00000575978 SIGLEC1Q9BZZ2 1709 aa10.63□□□□□ -0.71
EIF4A3-206ENST00000575978 QRICH2Q9H0J4 1663 aa10.63□□□□□ -0.71
EIF4A3-206ENST00000575978 CABP2Q9NPB3 220 aa10.63□□□□□ -0.71
EIF4A3-206ENST00000575978 CENPQQ7L2Z9 268 aaPredicted RBP10.63□□□□□ -0.71
EIF4A3-206ENST00000575978 SLC52A1Q9NWF4 448 aa10.62□□□□□ -0.71
EIF4A3-206ENST00000575978 ADRA2BP18089 450 aa10.62□□□□□ -0.71
EIF4A3-206ENST00000575978 TNNQ9UQP3 1299 aa10.62□□□□□ -0.71
EIF4A3-206ENST00000575978 LMTK2Q8IWU2 1503 aa10.62□□□□□ -0.71
EIF4A3-206ENST00000575978 IQSEC2Q5JU85 1478 aa10.62□□□□□ -0.71
EIF4A3-206ENST00000575978 VIRMAQ69YN4 1812 aaKnown RBP10.62□□□□□ -0.71
EIF4A3-206ENST00000575978 NPATQ14207 1427 aa10.61□□□□□ -0.71
EIF4A3-206ENST00000575978 SETBP1Q9Y6X0 1596 aa10.61□□□□□ -0.71
EIF4A3-206ENST00000575978 ZNF518AQ6AHZ1 1483 aa10.61□□□□□ -0.71
EIF4A3-206ENST00000575978 USP19O94966 1318 aa10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 RPGRIP1LQ68CZ1 1315 aa10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 IDI1Q13907 227 aa10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 FTSJ3Q8IY81 847 aaKnown RBP10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 NSD3Q9BZ95 1437 aa10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 MTHFSP49914 203 aa10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 POLR3AO14802 1390 aaPredicted RBP10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 SBNO2Q9Y2G9 1366 aa10.6□□□□□ -0.71
EIF4A3-206ENST00000575978 E9PSI1 815 aa10.59□□□□□ -0.71
EIF4A3-206ENST00000575978 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
EIF4A3-206ENST00000575978 PANK1Q8TE04 598 aa10.59□□□□□ -0.71
EIF4A3-206ENST00000575978 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
EIF4A3-206ENST00000575978 SEC24BO95487 1268 aa10.59□□□□□ -0.71
EIF4A3-206ENST00000575978 GGNBP2Q9H3C7 697 aa10.58□□□□□ -0.72
EIF4A3-206ENST00000575978 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
EIF4A3-206ENST00000575978 TULP4Q9NRJ4 1543 aa10.58□□□□□ -0.72
EIF4A3-206ENST00000575978 SOX12O15370 315 aa10.57□□□□□ -0.72
EIF4A3-206ENST00000575978 RLBP1P12271 317 aa10.57□□□□□ -0.72
EIF4A3-206ENST00000575978 PRAM1Q96QH2 718 aa10.57□□□□□ -0.72
EIF4A3-206ENST00000575978 ARHGEF28Q8N1W1 1705 aaKnown RBP10.57□□□□□ -0.72
EIF4A3-206ENST00000575978 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
EIF4A3-206ENST00000575978 C14orf93Q9H972 538 aaKnown RBP10.57□□□□□ -0.72
EIF4A3-206ENST00000575978 MYH16Q9H6N6 1097 aa10.57□□□□□ -0.72
EIF4A3-206ENST00000575978 UPF2Q9HAU5 1272 aaKnown RBP10.57□□□□□ -0.72
EIF4A3-206ENST00000575978 NLRP1Q9C000 1473 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 FBXO31Q5XUX0 539 aaPredicted RBP10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 USP32Q8NFA0 1604 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 HECW2Q9P2P5 1572 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 NGEFQ8N5V2 710 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 CLUAP1Q96AJ1 413 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 COG6Q9Y2V7 657 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 GLI2P10070 1586 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 RUNDC1Q96C34 613 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 BCL2L13Q9BXK5 485 aa10.56□□□□□ -0.72
EIF4A3-206ENST00000575978 CAMSAP1Q5T5Y3 1602 aa10.55□□□□□ -0.72
EIF4A3-206ENST00000575978 PIK3C2BO00750 1634 aa10.55□□□□□ -0.72
EIF4A3-206ENST00000575978 ABCC3O15438 1527 aa10.55□□□□□ -0.72
EIF4A3-206ENST00000575978 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
EIF4A3-206ENST00000575978 TCP11L2Q8N4U5 519 aa10.55□□□□□ -0.72
EIF4A3-206ENST00000575978 PCDHB15Q9Y5E8 787 aa10.54□□□□□ -0.72
EIF4A3-206ENST00000575978 NEXMIFQ5QGS0 1516 aa10.54□□□□□ -0.72
EIF4A3-206ENST00000575978 MYO5BQ9ULV0 1848 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms