RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 JCADQ9P266 1359 aa15.56■□□□□ 0.08
SLC12A4-215ENST00000575857 DLC1Q96QB1 1528 aa15.56■□□□□ 0.08
SLC12A4-215ENST00000575857 LRP6O75581 1613 aa15.56■□□□□ 0.08
SLC12A4-215ENST00000575857 PHLPP1O60346 1717 aa15.56■□□□□ 0.08
SLC12A4-215ENST00000575857 TRPM1Q7Z4N2 1603 aa15.55■□□□□ 0.08
SLC12A4-215ENST00000575857 PLEKHH1Q9ULM0 1364 aa15.55■□□□□ 0.08
SLC12A4-215ENST00000575857 COL16A1Q07092 1604 aaPredicted RBP15.54■□□□□ 0.08
SLC12A4-215ENST00000575857 ADGRL3Q9HAR2 1447 aa15.54■□□□□ 0.08
SLC12A4-215ENST00000575857 WAPLQ7Z5K2 1190 aa15.54■□□□□ 0.08
SLC12A4-215ENST00000575857 GPRASP1Q5JY77 1395 aa15.53■□□□□ 0.08
SLC12A4-215ENST00000575857 C19orf44Q9H6X5 657 aa15.53■□□□□ 0.08
SLC12A4-215ENST00000575857 TRAK1Q9UPV9 953 aa15.52■□□□□ 0.08
SLC12A4-215ENST00000575857 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.07
SLC12A4-215ENST00000575857 DCCP43146 1447 aa15.51■□□□□ 0.07
SLC12A4-215ENST00000575857 ATF3P18847 181 aa15.5■□□□□ 0.07
SLC12A4-215ENST00000575857 PRAM1Q96QH2 718 aa15.5■□□□□ 0.07
SLC12A4-215ENST00000575857 NALCNQ8IZF0 1738 aa15.5■□□□□ 0.07
SLC12A4-215ENST00000575857 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.5■□□□□ 0.07
SLC12A4-215ENST00000575857 BRINP3Q76B58 766 aa15.49■□□□□ 0.07
SLC12A4-215ENST00000575857 ROCK2O75116 1388 aaKnown RBP15.49■□□□□ 0.07
SLC12A4-215ENST00000575857 MEX3CQ5U5Q3 659 aaKnown RBP15.48■□□□□ 0.07
SLC12A4-215ENST00000575857 CADPS2Q86UW7 1296 aa15.48■□□□□ 0.07
SLC12A4-215ENST00000575857 ARHGEF28Q8N1W1 1705 aaKnown RBP15.48■□□□□ 0.07
SLC12A4-215ENST00000575857 NUTM2BA6NNL0 878 aaPredicted RBP15.47■□□□□ 0.07
SLC12A4-215ENST00000575857 NUTM2EB1AL46 878 aaPredicted RBP15.47■□□□□ 0.07
SLC12A4-215ENST00000575857 NUTM2AQ8IVF1 878 aaPredicted RBP15.47■□□□□ 0.07
SLC12A4-215ENST00000575857 CDC42BPGQ6DT37 1551 aa15.46■□□□□ 0.07
SLC12A4-215ENST00000575857 DDX17Q92841 729 aaKnown RBP15.46■□□□□ 0.07
SLC12A4-215ENST00000575857 POGKQ9P215 609 aa15.46■□□□□ 0.07
SLC12A4-215ENST00000575857 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.06
SLC12A4-215ENST00000575857 SPATA31A6Q5VVP1 1343 aa15.45■□□□□ 0.06
SLC12A4-215ENST00000575857 MST1RQ04912 1400 aa15.45■□□□□ 0.06
SLC12A4-215ENST00000575857 SAFB2Q14151 953 aaKnown RBP eCLIP15.44■□□□□ 0.06
SLC12A4-215ENST00000575857 ADGRB2O60241 1585 aa15.44■□□□□ 0.06
SLC12A4-215ENST00000575857 CARD11Q9BXL7 1154 aa15.43■□□□□ 0.06
SLC12A4-215ENST00000575857 CENPJQ9HC77 1338 aaPredicted RBP15.42■□□□□ 0.06
SLC12A4-215ENST00000575857 C1orf167Q5SNV9 1468 aa15.41■□□□□ 0.06
SLC12A4-215ENST00000575857 UPF1Q92900 1129 aaKnown RBP eCLIP15.41■□□□□ 0.06
SLC12A4-215ENST00000575857 MINK1Q8N4C8 1332 aaPredicted RBP15.41■□□□□ 0.06
SLC12A4-215ENST00000575857 ZNF772Q68DY9 489 aaPredicted RBP15.4■□□□□ 0.06
SLC12A4-215ENST00000575857 SHPRHQ149N8 1683 aa15.4■□□□□ 0.06
SLC12A4-215ENST00000575857 HIRIP3Q9BW71 556 aaPredicted RBP15.39■□□□□ 0.05
SLC12A4-215ENST00000575857 FMN2Q9NZ56 1722 aa15.39■□□□□ 0.05
SLC12A4-215ENST00000575857 AFF2P51816 1311 aa15.39■□□□□ 0.05
SLC12A4-215ENST00000575857 EIF3AQ14152 1382 aaKnown RBP15.38■□□□□ 0.05
SLC12A4-215ENST00000575857 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
SLC12A4-215ENST00000575857 RXRBP28702 533 aa15.37■□□□□ 0.05
SLC12A4-215ENST00000575857 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
SLC12A4-215ENST00000575857 ANKARQ7Z5J8 1434 aa15.36■□□□□ 0.05
SLC12A4-215ENST00000575857 ORAI2Q96SN7 254 aa15.36■□□□□ 0.05
SLC12A4-215ENST00000575857 PRR36Q9H6K5 1346 aa15.36■□□□□ 0.05
SLC12A4-215ENST00000575857 QRICH2Q9H0J4 1663 aa15.35■□□□□ 0.05
SLC12A4-215ENST00000575857 NUTM2FA1L443 756 aa15.35■□□□□ 0.05
SLC12A4-215ENST00000575857 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
SLC12A4-215ENST00000575857 USP32Q8NFA0 1604 aa15.35■□□□□ 0.05
SLC12A4-215ENST00000575857 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
SLC12A4-215ENST00000575857 USP47Q96K76 1375 aa15.35■□□□□ 0.05
SLC12A4-215ENST00000575857 TULP4Q9NRJ4 1543 aa15.34■□□□□ 0.05
SLC12A4-215ENST00000575857 CDK19Q9BWU1 502 aa15.34■□□□□ 0.05
SLC12A4-215ENST00000575857 TESK2Q96S53 571 aa15.33■□□□□ 0.04
SLC12A4-215ENST00000575857 ATP7BP35670 1465 aa15.33■□□□□ 0.04
SLC12A4-215ENST00000575857 NHSL1Q5SYE7 1610 aa15.32■□□□□ 0.04
SLC12A4-215ENST00000575857 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
SLC12A4-215ENST00000575857 ADAMTS2O95450 1211 aa15.32■□□□□ 0.04
SLC12A4-215ENST00000575857 LRRC59Q96AG4 307 aaKnown RBP15.32■□□□□ 0.04
SLC12A4-215ENST00000575857 ESCO1Q5FWF5 840 aa15.31■□□□□ 0.04
SLC12A4-215ENST00000575857 RGS12O14924 1447 aa15.31■□□□□ 0.04
SLC12A4-215ENST00000575857 QTRT2Q9H974 415 aaKnown RBP15.3■□□□□ 0.04
SLC12A4-215ENST00000575857 EVC2Q86UK5 1308 aa15.29■□□□□ 0.04
SLC12A4-215ENST00000575857 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
SLC12A4-215ENST00000575857 CDK12Q9NYV4 1490 aaPredicted RBP15.28■□□□□ 0.04
SLC12A4-215ENST00000575857 SOS2Q07890 1332 aaPredicted RBP15.28■□□□□ 0.04
SLC12A4-215ENST00000575857 CABP2Q9NPB3 220 aa15.28■□□□□ 0.04
SLC12A4-215ENST00000575857 PHF8Q9UPP1 1060 aa15.28■□□□□ 0.04
SLC12A4-215ENST00000575857 RGPD8O14715 1765 aaPredicted RBP15.28■□□□□ 0.04
SLC12A4-215ENST00000575857 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.04
SLC12A4-215ENST00000575857 KIF1AQ12756 1690 aa15.27■□□□□ 0.03
SLC12A4-215ENST00000575857 TOPAZ1Q8N9V7 1692 aa15.26■□□□□ 0.03
SLC12A4-215ENST00000575857 FOXO3O43524 673 aa15.26■□□□□ 0.03
SLC12A4-215ENST00000575857 SRPK2P78362 688 aaKnown RBP15.26■□□□□ 0.03
SLC12A4-215ENST00000575857 NGLY1Q96IV0 654 aa15.26■□□□□ 0.03
SLC12A4-215ENST00000575857 PXDNQ92626 1479 aa15.26■□□□□ 0.03
SLC12A4-215ENST00000575857 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
SLC12A4-215ENST00000575857 PLEKHG3A1L390 1219 aa15.25■□□□□ 0.03
SLC12A4-215ENST00000575857 RBM6P78332 1123 aaKnown RBP15.25■□□□□ 0.03
SLC12A4-215ENST00000575857 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
SLC12A4-215ENST00000575857 HSPA5P11021 654 aaKnown RBP15.24■□□□□ 0.03
SLC12A4-215ENST00000575857 EIF4G2P78344 907 aaKnown RBP eCLIP15.24■□□□□ 0.03
SLC12A4-215ENST00000575857 PMFBP1Q8TBY8 1022 aa15.24■□□□□ 0.03
SLC12A4-215ENST00000575857 PUS7Q96PZ0 661 aaKnown RBP15.24■□□□□ 0.03
SLC12A4-215ENST00000575857 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
SLC12A4-215ENST00000575857 XPCQ01831 940 aaPredicted RBP15.23■□□□□ 0.03
SLC12A4-215ENST00000575857 ATAD2Q6PL18 1390 aa15.23■□□□□ 0.03
SLC12A4-215ENST00000575857 PPIP5K1Q6PFW1 1433 aa15.22■□□□□ 0.03
SLC12A4-215ENST00000575857 ITSN1Q15811 1721 aa15.22■□□□□ 0.03
SLC12A4-215ENST00000575857 CABP1Q9NZU7 370 aa15.21■□□□□ 0.03
SLC12A4-215ENST00000575857 USP21Q9UK80 565 aa15.21■□□□□ 0.03
SLC12A4-215ENST00000575857 SRCAPQ6ZRS2 3230 aa15.21■□□□□ 0.03
SLC12A4-215ENST00000575857 TMF1P82094 1093 aa15.2■□□□□ 0.02
SLC12A4-215ENST00000575857 KRT28Q7Z3Y7 464 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms