RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 FOXO3O43524 673 aa13.59□□□□□ -0.23
SMG6-218ENST00000575454 NEXMIFQ5QGS0 1516 aa13.59□□□□□ -0.23
SMG6-218ENST00000575454 MYOM2P54296 1465 aa13.57□□□□□ -0.24
SMG6-218ENST00000575454 BCL9LQ86UU0 1499 aa13.57□□□□□ -0.24
SMG6-218ENST00000575454 UNC5CLQ8IV45 518 aa13.57□□□□□ -0.24
SMG6-218ENST00000575454 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
SMG6-218ENST00000575454 SF3B2Q13435 895 aaKnown RBP13.55□□□□□ -0.24
SMG6-218ENST00000575454 LAMC1P11047 1609 aa13.54□□□□□ -0.24
SMG6-218ENST00000575454 XPCQ01831 940 aaPredicted RBP13.54□□□□□ -0.24
SMG6-218ENST00000575454 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
SMG6-218ENST00000575454 NAIPQ13075 1403 aa13.53□□□□□ -0.24
SMG6-218ENST00000575454 PSME1Q06323 249 aa13.52□□□□□ -0.25
SMG6-218ENST00000575454 STK26Q9P289 416 aa13.52□□□□□ -0.25
SMG6-218ENST00000575454 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
SMG6-218ENST00000575454 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
SMG6-218ENST00000575454 PXDNQ92626 1479 aa13.51□□□□□ -0.25
SMG6-218ENST00000575454 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
SMG6-218ENST00000575454 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
SMG6-218ENST00000575454 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
SMG6-218ENST00000575454 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
SMG6-218ENST00000575454 SPHKAPQ2M3C7 1700 aa13.5□□□□□ -0.25
SMG6-218ENST00000575454 NALCNQ8IZF0 1738 aa13.5□□□□□ -0.25
SMG6-218ENST00000575454 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
SMG6-218ENST00000575454 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
SMG6-218ENST00000575454 VPS72Q15906 364 aa13.5□□□□□ -0.25
SMG6-218ENST00000575454 KRT28Q7Z3Y7 464 aa13.5□□□□□ -0.25
SMG6-218ENST00000575454 SEPT12Q8IYM1 358 aa13.5□□□□□ -0.25
SMG6-218ENST00000575454 SIRT1Q96EB6 747 aa13.5□□□□□ -0.25
SMG6-218ENST00000575454 CCDC144AA2RUR9 1427 aa13.49□□□□□ -0.25
SMG6-218ENST00000575454 TECPR2O15040 1411 aa13.49□□□□□ -0.25
SMG6-218ENST00000575454 ADGRF5Q8IZF2 1346 aa13.49□□□□□ -0.25
SMG6-218ENST00000575454 ONECUT3O60422 494 aaPredicted RBP13.49□□□□□ -0.25
SMG6-218ENST00000575454 CDC42BPGQ6DT37 1551 aa13.49□□□□□ -0.25
SMG6-218ENST00000575454 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
SMG6-218ENST00000575454 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
SMG6-218ENST00000575454 SLIT2O94813 1529 aa13.48□□□□□ -0.25
SMG6-218ENST00000575454 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
SMG6-218ENST00000575454 KRT27Q7Z3Y8 459 aa13.47□□□□□ -0.25
SMG6-218ENST00000575454 CCDC9Q9Y3X0 531 aaKnown RBP13.47□□□□□ -0.25
SMG6-218ENST00000575454 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
SMG6-218ENST00000575454 TMEM132EQ6IEE7 984 aa13.46□□□□□ -0.25
SMG6-218ENST00000575454 DEFB132Q7Z7B7 95 aa13.46□□□□□ -0.25
SMG6-218ENST00000575454 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
SMG6-218ENST00000575454 BAG6P46379 1132 aa13.44□□□□□ -0.26
SMG6-218ENST00000575454 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
SMG6-218ENST00000575454 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
SMG6-218ENST00000575454 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
SMG6-218ENST00000575454 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
SMG6-218ENST00000575454 TNS3Q68CZ2 1445 aa13.42□□□□□ -0.26
SMG6-218ENST00000575454 A0A0G2JS52 829 aa13.42□□□□□ -0.26
SMG6-218ENST00000575454 MYT1Q01538 1121 aa13.42□□□□□ -0.26
SMG6-218ENST00000575454 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
SMG6-218ENST00000575454 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
SMG6-218ENST00000575454 ACIN1Q9UKV3 1341 aaKnown RBP13.41□□□□□ -0.26
SMG6-218ENST00000575454 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
SMG6-218ENST00000575454 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
SMG6-218ENST00000575454 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
SMG6-218ENST00000575454 SPATA31E1Q6ZUB1 1445 aa13.4□□□□□ -0.26
SMG6-218ENST00000575454 MPHOSPH9Q99550 1183 aa13.4□□□□□ -0.26
SMG6-218ENST00000575454 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
SMG6-218ENST00000575454 KIF1BO60333 1816 aa13.39□□□□□ -0.27
SMG6-218ENST00000575454 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
SMG6-218ENST00000575454 HRCP23327 699 aa13.38□□□□□ -0.27
SMG6-218ENST00000575454 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
SMG6-218ENST00000575454 PRAM1Q96QH2 718 aa13.38□□□□□ -0.27
SMG6-218ENST00000575454 POGKQ9P215 609 aa13.38□□□□□ -0.27
SMG6-218ENST00000575454 GLI3P10071 1580 aa13.37□□□□□ -0.27
SMG6-218ENST00000575454 BTG4Q9NY30 223 aa13.37□□□□□ -0.27
SMG6-218ENST00000575454 LRP5O75197 1615 aa13.36□□□□□ -0.27
SMG6-218ENST00000575454 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
SMG6-218ENST00000575454 PSDA5PKW4 1024 aaPredicted RBP13.36□□□□□ -0.27
SMG6-218ENST00000575454 NRXN1Q9ULB1 1477 aa13.36□□□□□ -0.27
SMG6-218ENST00000575454 SAFB2Q14151 953 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMG6-218ENST00000575454 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
SMG6-218ENST00000575454 PMFBP1Q8TBY8 1022 aa13.35□□□□□ -0.27
SMG6-218ENST00000575454 ANKARQ7Z5J8 1434 aa13.35□□□□□ -0.27
SMG6-218ENST00000575454 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
SMG6-218ENST00000575454 USP32Q8NFA0 1604 aa13.34□□□□□ -0.27
SMG6-218ENST00000575454 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
SMG6-218ENST00000575454 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.33□□□□□ -0.27
SMG6-218ENST00000575454 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
SMG6-218ENST00000575454 SPATA31A5Q5VU36 1347 aa13.33□□□□□ -0.28
SMG6-218ENST00000575454 SPATA31A7Q8IWB4 1347 aa13.33□□□□□ -0.28
SMG6-218ENST00000575454 PPLO60437 1756 aa13.31□□□□□ -0.28
SMG6-218ENST00000575454 R3HDM1Q15032 1099 aaKnown RBP13.31□□□□□ -0.28
SMG6-218ENST00000575454 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
SMG6-218ENST00000575454 NGDNQ8NEJ9 315 aaKnown RBP13.31□□□□□ -0.28
SMG6-218ENST00000575454 PRDM11Q9NQV5 511 aa13.31□□□□□ -0.28
SMG6-218ENST00000575454 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
SMG6-218ENST00000575454 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
SMG6-218ENST00000575454 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
SMG6-218ENST00000575454 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
SMG6-218ENST00000575454 HIRIP3Q9BW71 556 aaPredicted RBP13.28□□□□□ -0.28
SMG6-218ENST00000575454 TRAK1Q9UPV9 953 aa13.28□□□□□ -0.28
SMG6-218ENST00000575454 PARD3Q8TEW0 1356 aa13.28□□□□□ -0.28
SMG6-218ENST00000575454 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
SMG6-218ENST00000575454 EZH2Q15910 746 aaKnown RBP13.27□□□□□ -0.29
SMG6-218ENST00000575454 FAM182BQ5T319 152 aa13.27□□□□□ -0.29
SMG6-218ENST00000575454 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.29
SMG6-218ENST00000575454 MARF1Q9Y4F3 1742 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms