RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.37
SMG6-216ENST00000575176 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
SMG6-216ENST00000575176 LRP6O75581 1613 aa12.77□□□□□ -0.37
SMG6-216ENST00000575176 PXDNQ92626 1479 aa12.76□□□□□ -0.37
SMG6-216ENST00000575176 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
SMG6-216ENST00000575176 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
SMG6-216ENST00000575176 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
SMG6-216ENST00000575176 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
SMG6-216ENST00000575176 BRINP3Q76B58 766 aa12.74□□□□□ -0.37
SMG6-216ENST00000575176 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
SMG6-216ENST00000575176 CADPS2Q86UW7 1296 aa12.73□□□□□ -0.37
SMG6-216ENST00000575176 SIN3AQ96ST3 1273 aa12.73□□□□□ -0.37
SMG6-216ENST00000575176 MARF1Q9Y4F3 1742 aaKnown RBP12.73□□□□□ -0.37
SMG6-216ENST00000575176 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
SMG6-216ENST00000575176 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
SMG6-216ENST00000575176 SIRT1Q96EB6 747 aa12.72□□□□□ -0.37
SMG6-216ENST00000575176 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
SMG6-216ENST00000575176 ATP7BP35670 1465 aa12.72□□□□□ -0.37
SMG6-216ENST00000575176 ALS2Q96Q42 1657 aa12.71□□□□□ -0.37
SMG6-216ENST00000575176 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
SMG6-216ENST00000575176 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
SMG6-216ENST00000575176 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
SMG6-216ENST00000575176 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
SMG6-216ENST00000575176 ATF3P18847 181 aa12.68□□□□□ -0.38
SMG6-216ENST00000575176 STK26Q9P289 416 aa12.68□□□□□ -0.38
SMG6-216ENST00000575176 ANKARQ7Z5J8 1434 aa12.68□□□□□ -0.38
SMG6-216ENST00000575176 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
SMG6-216ENST00000575176 KDM2AQ9Y2K7 1162 aa12.67□□□□□ -0.38
SMG6-216ENST00000575176 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
SMG6-216ENST00000575176 PRAM1Q96QH2 718 aa12.66□□□□□ -0.38
SMG6-216ENST00000575176 PNPLA6Q8IY17 1366 aa12.66□□□□□ -0.38
SMG6-216ENST00000575176 JCADQ9P266 1359 aa12.66□□□□□ -0.38
SMG6-216ENST00000575176 PRR36Q9H6K5 1346 aa12.65□□□□□ -0.38
SMG6-216ENST00000575176 NRKQ7Z2Y5 1582 aa12.65□□□□□ -0.38
SMG6-216ENST00000575176 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
SMG6-216ENST00000575176 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
SMG6-216ENST00000575176 SOS2Q07890 1332 aaPredicted RBP12.64□□□□□ -0.39
SMG6-216ENST00000575176 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
SMG6-216ENST00000575176 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
SMG6-216ENST00000575176 PHRF1Q9P1Y6 1649 aaKnown RBP12.63□□□□□ -0.39
SMG6-216ENST00000575176 DISP3Q9P2K9 1392 aa12.62□□□□□ -0.39
SMG6-216ENST00000575176 RGS17Q9UGC6 210 aaPredicted RBP12.62□□□□□ -0.39
SMG6-216ENST00000575176 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
SMG6-216ENST00000575176 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
SMG6-216ENST00000575176 ILDR2Q71H61 639 aa12.61□□□□□ -0.39
SMG6-216ENST00000575176 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
SMG6-216ENST00000575176 MON2Q7Z3U7 1717 aa12.6□□□□□ -0.39
SMG6-216ENST00000575176 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
SMG6-216ENST00000575176 USP54Q70EL1 1684 aa12.59□□□□□ -0.39
SMG6-216ENST00000575176 SAFB2Q14151 953 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMG6-216ENST00000575176 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
SMG6-216ENST00000575176 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
SMG6-216ENST00000575176 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
SMG6-216ENST00000575176 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
SMG6-216ENST00000575176 MYOM1P52179 1685 aa12.57□□□□□ -0.4
SMG6-216ENST00000575176 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
SMG6-216ENST00000575176 TNS3Q68CZ2 1445 aa12.57□□□□□ -0.4
SMG6-216ENST00000575176 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
SMG6-216ENST00000575176 NUTM2FA1L443 756 aa12.56□□□□□ -0.4
SMG6-216ENST00000575176 NWD2Q9ULI1 1742 aa12.56□□□□□ -0.4
SMG6-216ENST00000575176 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
SMG6-216ENST00000575176 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
SMG6-216ENST00000575176 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
SMG6-216ENST00000575176 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
SMG6-216ENST00000575176 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
SMG6-216ENST00000575176 PCGF6Q9BYE7 350 aa12.55□□□□□ -0.4
SMG6-216ENST00000575176 EIF3AQ14152 1382 aaKnown RBP12.55□□□□□ -0.4
SMG6-216ENST00000575176 ESCO1Q5FWF5 840 aa12.54□□□□□ -0.4
SMG6-216ENST00000575176 CLSPNQ9HAW4 1339 aa12.54□□□□□ -0.4
SMG6-216ENST00000575176 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
SMG6-216ENST00000575176 SBNO1A3KN83 1393 aa12.54□□□□□ -0.4
SMG6-216ENST00000575176 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
SMG6-216ENST00000575176 EP400Q96L91 3159 aa12.53□□□□□ -0.4
SMG6-216ENST00000575176 POGKQ9P215 609 aa12.53□□□□□ -0.4
SMG6-216ENST00000575176 SPATA31A3Q5VYP0 1347 aa12.53□□□□□ -0.4
SMG6-216ENST00000575176 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
SMG6-216ENST00000575176 LMO7Q8WWI1 1683 aa12.52□□□□□ -0.4
SMG6-216ENST00000575176 FOXO3O43524 673 aa12.52□□□□□ -0.41
SMG6-216ENST00000575176 XPCQ01831 940 aaPredicted RBP12.52□□□□□ -0.41
SMG6-216ENST00000575176 PHF8Q9UPP1 1060 aa12.52□□□□□ -0.41
SMG6-216ENST00000575176 LRRC59Q96AG4 307 aaKnown RBP12.51□□□□□ -0.41
SMG6-216ENST00000575176 SLIT2O94813 1529 aa12.51□□□□□ -0.41
SMG6-216ENST00000575176 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
SMG6-216ENST00000575176 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
SMG6-216ENST00000575176 GLI3P10071 1580 aa12.5□□□□□ -0.41
SMG6-216ENST00000575176 COL14A1Q05707 1796 aaKnown RBP12.49□□□□□ -0.41
SMG6-216ENST00000575176 SLIT3O75094 1523 aa12.49□□□□□ -0.41
SMG6-216ENST00000575176 BCL9LQ86UU0 1499 aa12.49□□□□□ -0.41
SMG6-216ENST00000575176 NUDT16Q96DE0 195 aaKnown RBP12.48□□□□□ -0.41
SMG6-216ENST00000575176 CDK19Q9BWU1 502 aa12.48□□□□□ -0.41
SMG6-216ENST00000575176 COL18A1P39060 1754 aa12.48□□□□□ -0.41
SMG6-216ENST00000575176 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
SMG6-216ENST00000575176 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
SMG6-216ENST00000575176 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.41
SMG6-216ENST00000575176 ATRNO75882 1429 aa12.46□□□□□ -0.41
SMG6-216ENST00000575176 USP6P35125 1406 aa12.46□□□□□ -0.41
SMG6-216ENST00000575176 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.41
SMG6-216ENST00000575176 TESK2Q96S53 571 aa12.46□□□□□ -0.41
SMG6-216ENST00000575176 BRWD3Q6RI45 1802 aa12.46□□□□□ -0.42
SMG6-216ENST00000575176 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms