RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ALKQ9UM73 1620 aa31.41■■■□□ 2.62
NPLOC4-217ENST00000574897 PPP6R1Q9UPN7 881 aa31.39■■■□□ 2.62
NPLOC4-217ENST00000574897 YTHDC2Q9H6S0 1430 aaKnown RBP31.38■■■□□ 2.61
NPLOC4-217ENST00000574897 MORC1Q86VD1 984 aa31.38■■■□□ 2.61
NPLOC4-217ENST00000574897 A2ML1A8K2U0 1454 aa31.37■■■□□ 2.61
NPLOC4-217ENST00000574897 USP32Q8NFA0 1604 aa31.37■■■□□ 2.61
NPLOC4-217ENST00000574897 PRAM1Q96QH2 718 aa31.36■■■□□ 2.61
NPLOC4-217ENST00000574897 MINK1Q8N4C8 1332 aaPredicted RBP31.36■■■□□ 2.61
NPLOC4-217ENST00000574897 SHPRHQ149N8 1683 aa31.34■■■□□ 2.61
NPLOC4-217ENST00000574897 ZNF521Q96K83 1311 aa31.33■■■□□ 2.61
NPLOC4-217ENST00000574897 CCDC136Q96JN2 1154 aa31.33■■■□□ 2.61
NPLOC4-217ENST00000574897 ANKRD36BQ8N2N9 1353 aa31.33■■■□□ 2.61
NPLOC4-217ENST00000574897 SRPK2P78362 688 aaKnown RBP31.32■■■□□ 2.6
NPLOC4-217ENST00000574897 APAF1O14727 1248 aa31.31■■■□□ 2.6
NPLOC4-217ENST00000574897 EXOC6Q8TAG9 804 aa31.31■■■□□ 2.6
NPLOC4-217ENST00000574897 PUS7Q96PZ0 661 aaKnown RBP31.31■■■□□ 2.6
NPLOC4-217ENST00000574897 PLIN1O60240 522 aa31.3■■■□□ 2.6
NPLOC4-217ENST00000574897 POGKQ9P215 609 aa31.3■■■□□ 2.6
NPLOC4-217ENST00000574897 CGNL1Q0VF96 1302 aa31.3■■■□□ 2.6
NPLOC4-217ENST00000574897 POLR3AO14802 1390 aaPredicted RBP31.3■■■□□ 2.6
NPLOC4-217ENST00000574897 RIMS2Q9UQ26 1411 aa31.29■■■□□ 2.6
NPLOC4-217ENST00000574897 SETD1AO15047 1707 aaKnown RBP31.29■■■□□ 2.6
NPLOC4-217ENST00000574897 A0A1W2PP64 1363 aa31.27■■■□□ 2.6
NPLOC4-217ENST00000574897 DUSP27Q5VZP5 1158 aa31.27■■■□□ 2.6
NPLOC4-217ENST00000574897 ZMYM3Q14202 1370 aa31.26■■■□□ 2.6
NPLOC4-217ENST00000574897 GOLGA2Q08379 1002 aa31.24■■■□□ 2.59
NPLOC4-217ENST00000574897 ESF1Q9H501 851 aaKnown RBP31.23■■■□□ 2.59
NPLOC4-217ENST00000574897 SPINK5Q9NQ38 1064 aaPredicted RBP31.22■■■□□ 2.59
NPLOC4-217ENST00000574897 MTHFSP49914 203 aa31.22■■■□□ 2.59
NPLOC4-217ENST00000574897 NRXN3Q9Y4C0 1643 aa31.21■■■□□ 2.59
NPLOC4-217ENST00000574897 WAPLQ7Z5K2 1190 aa31.2■■■□□ 2.59
NPLOC4-217ENST00000574897 SLFN5Q08AF3 891 aa31.19■■■□□ 2.58
NPLOC4-217ENST00000574897 DMRT2Q9Y5R5 561 aa31.19■■■□□ 2.58
NPLOC4-217ENST00000574897 CD163L1Q9NR16 1453 aa31.18■■■□□ 2.58
NPLOC4-217ENST00000574897 CDK19Q9BWU1 502 aa31.17■■■□□ 2.58
NPLOC4-217ENST00000574897 ATAD2Q6PL18 1390 aa31.16■■■□□ 2.58
NPLOC4-217ENST00000574897 ABCC11Q96J66 1382 aa31.16■■■□□ 2.58
NPLOC4-217ENST00000574897 GGNBP2Q9H3C7 697 aa31.15■■■□□ 2.58
NPLOC4-217ENST00000574897 NINLQ9Y2I6 1382 aa31.14■■■□□ 2.58
NPLOC4-217ENST00000574897 NSD2O96028 1365 aa31.14■■■□□ 2.58
NPLOC4-217ENST00000574897 C20orf194Q5TEA3 1177 aa31.13■■■□□ 2.57
NPLOC4-217ENST00000574897 TRMT2AQ8IZ69 625 aaKnown RBP31.11■■■□□ 2.57
NPLOC4-217ENST00000574897 CRBNQ96SW2 442 aa31.11■■■□□ 2.57
NPLOC4-217ENST00000574897 ANKRD26Q9UPS8 1709 aa31.11■■■□□ 2.57
NPLOC4-217ENST00000574897 DLC1Q96QB1 1528 aa31.11■■■□□ 2.57
NPLOC4-217ENST00000574897 METP08581 1390 aa31.11■■■□□ 2.57
NPLOC4-217ENST00000574897 CABP1Q9NZU7 370 aa31.09■■■□□ 2.57
NPLOC4-217ENST00000574897 RRP7AQ9Y3A4 280 aaKnown RBP31.09■■■□□ 2.57
NPLOC4-217ENST00000574897 TNRQ92752 1358 aa31.09■■■□□ 2.57
NPLOC4-217ENST00000574897 NEUROD2Q15784 382 aa31.09■■■□□ 2.57
NPLOC4-217ENST00000574897 TERF2IPQ9NYB0 399 aa31.08■■■□□ 2.57
NPLOC4-217ENST00000574897 UBR1Q8IWV7 1749 aa31.08■■■□□ 2.57
NPLOC4-217ENST00000574897 FYB1O15117 783 aa31.07■■■□□ 2.56
NPLOC4-217ENST00000574897 CFAP53Q96M91 514 aa31.06■■■□□ 2.56
NPLOC4-217ENST00000574897 NLRP1Q9C000 1473 aa31.06■■■□□ 2.56
NPLOC4-217ENST00000574897 KIF20BQ96Q89 1820 aa31.05■■■□□ 2.56
NPLOC4-217ENST00000574897 IQSEC2Q5JU85 1478 aa31.05■■■□□ 2.56
NPLOC4-217ENST00000574897 WWC1Q8IX03 1113 aa31.05■■■□□ 2.56
NPLOC4-217ENST00000574897 RUNDC1Q96C34 613 aa31.05■■■□□ 2.56
NPLOC4-217ENST00000574897 NKTRP30414 1462 aaKnown RBP31.03■■■□□ 2.56
NPLOC4-217ENST00000574897 TCP11L2Q8N4U5 519 aa31.03■■■□□ 2.56
NPLOC4-217ENST00000574897 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.03■■■□□ 2.56
NPLOC4-217ENST00000574897 TXNDC2Q86VQ3 553 aa31.02■■■□□ 2.56
NPLOC4-217ENST00000574897 E9PSI1 815 aa31.01■■■□□ 2.56
NPLOC4-217ENST00000574897 HDGFL2Q7Z4V5 671 aaPredicted RBP31.01■■■□□ 2.55
NPLOC4-217ENST00000574897 CEBPAP49715 358 aaPredicted RBP31■■■□□ 2.55
NPLOC4-217ENST00000574897 U2AF1L5P0DN76 240 aaPredicted RBP30.99■■■□□ 2.55
NPLOC4-217ENST00000574897 U2AF1Q01081 240 aaKnown RBP eCLIP30.99■■■□□ 2.55
NPLOC4-217ENST00000574897 NGEFQ8N5V2 710 aa30.97■■■□□ 2.55
NPLOC4-217ENST00000574897 TMEM2Q9UHN6 1383 aa30.97■■■□□ 2.55
NPLOC4-217ENST00000574897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.97■■■□□ 2.552e-6■■■■□ 23
NPLOC4-217ENST00000574897 KNDC1Q76NI1 1749 aa30.96■■■□□ 2.55
NPLOC4-217ENST00000574897 COL3A1P02461 1466 aaPredicted RBP30.96■■■□□ 2.55
NPLOC4-217ENST00000574897 BCAR3O75815 825 aa30.95■■■□□ 2.55
NPLOC4-217ENST00000574897 PLPPR3Q6T4P5 718 aa30.95■■■□□ 2.54
NPLOC4-217ENST00000574897 MED14O60244 1454 aa30.95■■■□□ 2.54
NPLOC4-217ENST00000574897 NCKAP5LQ9HCH0 1330 aa30.93■■■□□ 2.54
NPLOC4-217ENST00000574897 FBLN1P23142 703 aa30.93■■■□□ 2.54
NPLOC4-217ENST00000574897 WASLO00401 505 aaPredicted RBP30.92■■■□□ 2.54
NPLOC4-217ENST00000574897 U2SURPO15042 1029 aaKnown RBP30.91■■■□□ 2.54
NPLOC4-217ENST00000574897 PHF23Q9BUL5 403 aaPredicted RBP30.91■■■□□ 2.54
NPLOC4-217ENST00000574897 ATP7BP35670 1465 aa30.91■■■□□ 2.54
NPLOC4-217ENST00000574897 C3P01024 1663 aa30.9■■■□□ 2.54
NPLOC4-217ENST00000574897 ADGRB2O60241 1585 aa30.89■■■□□ 2.54
NPLOC4-217ENST00000574897 MSH5O43196 834 aa30.89■■■□□ 2.54
NPLOC4-217ENST00000574897 LTKP29376 864 aa30.89■■■□□ 2.54
NPLOC4-217ENST00000574897 HDGFP51858 240 aaKnown RBP30.89■■■□□ 2.54
NPLOC4-217ENST00000574897 PPIP5K1Q6PFW1 1433 aa30.89■■■□□ 2.53
NPLOC4-217ENST00000574897 FANCIQ9NVI1 1328 aa30.88■■■□□ 2.53
NPLOC4-217ENST00000574897 CPS1P31327 1500 aa30.88■■■□□ 2.53
NPLOC4-217ENST00000574897 MAP2P11137 1827 aaKnown RBP30.88■■■□□ 2.53
NPLOC4-217ENST00000574897 ADAMTS13Q76LX8 1427 aa30.88■■■□□ 2.53
NPLOC4-217ENST00000574897 TECPR2O15040 1411 aa30.87■■■□□ 2.53
NPLOC4-217ENST00000574897 SKAP1Q86WV1 359 aa30.86■■■□□ 2.53
NPLOC4-217ENST00000574897 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.86■■■□□ 2.53
NPLOC4-217ENST00000574897 FAM135BQ49AJ0 1406 aa30.84■■■□□ 2.53
NPLOC4-217ENST00000574897 ROBO2Q9HCK4 1378 aa30.84■■■□□ 2.53
NPLOC4-217ENST00000574897 FER1L4A9Z1Z3 1794 aa30.84■■■□□ 2.53
NPLOC4-217ENST00000574897 NUDT16Q96DE0 195 aaKnown RBP30.84■■■□□ 2.53
NPLOC4-217ENST00000574897 CPSF1Q10570 1443 aaKnown RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms