RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
PFN1-203ENST00000574872 SCAF1Q9H7N4 1312 aaKnown RBP23.15■■□□□ 1.3
PFN1-203ENST00000574872 ATF3P18847 181 aa23.15■■□□□ 1.3
PFN1-203ENST00000574872 PIP4K2BP78356 416 aa23.15■■□□□ 1.3
PFN1-203ENST00000574872 CARD11Q9BXL7 1154 aa23.15■■□□□ 1.3
PFN1-203ENST00000574872 GPRASP1Q5JY77 1395 aa23.14■■□□□ 1.3
PFN1-203ENST00000574872 FBXO41Q8TF61 875 aa23.14■■□□□ 1.29
PFN1-203ENST00000574872 MINK1Q8N4C8 1332 aaPredicted RBP23.11■■□□□ 1.29
PFN1-203ENST00000574872 DCCP43146 1447 aa23.11■■□□□ 1.29
PFN1-203ENST00000574872 CADPS2Q86UW7 1296 aa23.11■■□□□ 1.29
PFN1-203ENST00000574872 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
PFN1-203ENST00000574872 CENPJQ9HC77 1338 aaPredicted RBP23.08■■□□□ 1.28
PFN1-203ENST00000574872 CDC42BPGQ6DT37 1551 aa23.07■■□□□ 1.28
PFN1-203ENST00000574872 SLAIN2Q9P270 581 aa23.07■■□□□ 1.28
PFN1-203ENST00000574872 EIF3AQ14152 1382 aaKnown RBP23.06■■□□□ 1.28
PFN1-203ENST00000574872 NUTM2FA1L443 756 aa23.06■■□□□ 1.28
PFN1-203ENST00000574872 MST1RQ04912 1400 aa23.06■■□□□ 1.28
PFN1-203ENST00000574872 ILDR1Q86SU0 546 aaPredicted RBP23.03■■□□□ 1.28
PFN1-203ENST00000574872 QRICH2Q9H0J4 1663 aa23.03■■□□□ 1.28
PFN1-203ENST00000574872 ADGRB2O60241 1585 aa23.02■■□□□ 1.28
PFN1-203ENST00000574872 C1orf167Q5SNV9 1468 aa23■■□□□ 1.27
PFN1-203ENST00000574872 USP47Q96K76 1375 aa23■■□□□ 1.27
PFN1-203ENST00000574872 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
PFN1-203ENST00000574872 FMN2Q9NZ56 1722 aa22.99■■□□□ 1.27
PFN1-203ENST00000574872 WASLO00401 505 aaPredicted RBP22.99■■□□□ 1.27
PFN1-203ENST00000574872 BRINP3Q76B58 766 aa22.97■■□□□ 1.27
PFN1-203ENST00000574872 ORAI2Q96SN7 254 aa22.97■■□□□ 1.27
PFN1-203ENST00000574872 ST20-MTHFSA0A0A6YYL1 179 aa22.95■■□□□ 1.26
PFN1-203ENST00000574872 ESCO1Q5FWF5 840 aa22.95■■□□□ 1.26
PFN1-203ENST00000574872 CDK19Q9BWU1 502 aa22.95■■□□□ 1.26
PFN1-203ENST00000574872 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
PFN1-203ENST00000574872 HSPA1LP34931 641 aa22.93■■□□□ 1.26
PFN1-203ENST00000574872 PRR36Q9H6K5 1346 aa22.92■■□□□ 1.26
PFN1-203ENST00000574872 USP32Q8NFA0 1604 aa22.91■■□□□ 1.26
PFN1-203ENST00000574872 SRPK2P78362 688 aaKnown RBP22.91■■□□□ 1.26
PFN1-203ENST00000574872 DDX17Q92841 729 aaKnown RBP22.91■■□□□ 1.26
PFN1-203ENST00000574872 CABP2Q9NPB3 220 aa22.91■■□□□ 1.26
PFN1-203ENST00000574872 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
PFN1-203ENST00000574872 EVC2Q86UK5 1308 aa22.9■■□□□ 1.26
PFN1-203ENST00000574872 RGPD8O14715 1765 aaPredicted RBP22.9■■□□□ 1.26
PFN1-203ENST00000574872 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.25
PFN1-203ENST00000574872 ATP7BP35670 1465 aa22.88■■□□□ 1.25
PFN1-203ENST00000574872 NUDT16Q96DE0 195 aaKnown RBP22.88■■□□□ 1.25
PFN1-203ENST00000574872 TESK2Q96S53 571 aa22.88■■□□□ 1.25
PFN1-203ENST00000574872 EIF4G2P78344 907 aaKnown RBP eCLIP22.86■■□□□ 1.25
PFN1-203ENST00000574872 PMFBP1Q8TBY8 1022 aa22.86■■□□□ 1.25
PFN1-203ENST00000574872 PHF8Q9UPP1 1060 aa22.86■■□□□ 1.25
PFN1-203ENST00000574872 HSPA5P11021 654 aaKnown RBP22.85■■□□□ 1.25
PFN1-203ENST00000574872 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
PFN1-203ENST00000574872 PHLPP1O60346 1717 aa22.85■■□□□ 1.25
PFN1-203ENST00000574872 FOXO3O43524 673 aa22.84■■□□□ 1.25
PFN1-203ENST00000574872 NHSL1Q5SYE7 1610 aa22.83■■□□□ 1.25
PFN1-203ENST00000574872 XPCQ01831 940 aaPredicted RBP22.83■■□□□ 1.25
PFN1-203ENST00000574872 KIF1AQ12756 1690 aa22.82■■□□□ 1.24
PFN1-203ENST00000574872 DISP3Q9P2K9 1392 aa22.81■■□□□ 1.24
PFN1-203ENST00000574872 CCDC61Q9Y6R9 512 aa22.81■■□□□ 1.24
PFN1-203ENST00000574872 NPHP3Q7Z494 1330 aa22.81■■□□□ 1.24
PFN1-203ENST00000574872 ITSN1Q15811 1721 aa22.8■■□□□ 1.24
PFN1-203ENST00000574872 COL16A1Q07092 1604 aaPredicted RBP22.8■■□□□ 1.24
PFN1-203ENST00000574872 PPIP5K1Q6PFW1 1433 aa22.8■■□□□ 1.24
PFN1-203ENST00000574872 TOPAZ1Q8N9V7 1692 aa22.8■■□□□ 1.24
PFN1-203ENST00000574872 TMF1P82094 1093 aa22.79■■□□□ 1.24
PFN1-203ENST00000574872 NGDNQ8NEJ9 315 aaKnown RBP22.78■■□□□ 1.24
PFN1-203ENST00000574872 CABP1Q9NZU7 370 aa22.77■■□□□ 1.24
PFN1-203ENST00000574872 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
PFN1-203ENST00000574872 PXDNQ92626 1479 aa22.76■■□□□ 1.23
PFN1-203ENST00000574872 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
PFN1-203ENST00000574872 SLC24A1O60721 1099 aa22.75■■□□□ 1.23
PFN1-203ENST00000574872 PSME1Q06323 249 aa22.75■■□□□ 1.23
PFN1-203ENST00000574872 PLEKHG3A1L390 1219 aa22.74■■□□□ 1.23
PFN1-203ENST00000574872 KRT28Q7Z3Y7 464 aa22.74■■□□□ 1.23
PFN1-203ENST00000574872 ACEP12821 1306 aa22.74■■□□□ 1.23
PFN1-203ENST00000574872 ZEB1P37275 1124 aaPredicted RBP22.73■■□□□ 1.23
PFN1-203ENST00000574872 TMC1Q8TDI8 760 aa22.73■■□□□ 1.23
PFN1-203ENST00000574872 LRRC59Q96AG4 307 aaKnown RBP22.71■■□□□ 1.23
PFN1-203ENST00000574872 POLR3GLQ9BT43 218 aa22.71■■□□□ 1.23
PFN1-203ENST00000574872 POLR3AO14802 1390 aaPredicted RBP22.71■■□□□ 1.23
PFN1-203ENST00000574872 JCADQ9P266 1359 aa22.7■■□□□ 1.22
PFN1-203ENST00000574872 PUS7Q96PZ0 661 aaKnown RBP22.69■■□□□ 1.22
PFN1-203ENST00000574872 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
PFN1-203ENST00000574872 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
PFN1-203ENST00000574872 PAK3O75914 559 aaPredicted RBP22.67■■□□□ 1.22
PFN1-203ENST00000574872 LMOD2Q6P5Q4 547 aa22.67■■□□□ 1.22
PFN1-203ENST00000574872 PNPLA6Q8IY17 1366 aa22.66■■□□□ 1.22
PFN1-203ENST00000574872 TNS3Q68CZ2 1445 aa22.65■■□□□ 1.22
PFN1-203ENST00000574872 SBNO1A3KN83 1393 aa22.65■■□□□ 1.22
PFN1-203ENST00000574872 SPATA31A3Q5VYP0 1347 aa22.65■■□□□ 1.22
PFN1-203ENST00000574872 C11orf95C9JLR9 678 aaPredicted RBP22.65■■□□□ 1.22
PFN1-203ENST00000574872 TRPM3Q9HCF6 1732 aaPredicted RBP22.65■■□□□ 1.22
PFN1-203ENST00000574872 PLEKHG5O94827 1062 aa22.64■■□□□ 1.21
PFN1-203ENST00000574872 SHPRHQ149N8 1683 aa22.64■■□□□ 1.21
PFN1-203ENST00000574872 USP6P35125 1406 aa22.63■■□□□ 1.21
PFN1-203ENST00000574872 CD163L1Q9NR16 1453 aa22.62■■□□□ 1.21
PFN1-203ENST00000574872 CPSF1Q10570 1443 aaKnown RBP22.62■■□□□ 1.21
PFN1-203ENST00000574872 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
PFN1-203ENST00000574872 NUTM2BA6NNL0 878 aaPredicted RBP22.61■■□□□ 1.21
PFN1-203ENST00000574872 NUTM2EB1AL46 878 aaPredicted RBP22.61■■□□□ 1.21
PFN1-203ENST00000574872 HDGFL2Q7Z4V5 671 aaPredicted RBP22.61■■□□□ 1.21
PFN1-203ENST00000574872 NUTM2AQ8IVF1 878 aaPredicted RBP22.61■■□□□ 1.21
PFN1-203ENST00000574872 A0A1W2PP64 1363 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms