RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 HMGN5P82970 282 aaKnown RBP12.03□□□□□ -0.48
USP6-205ENST00000574788 SDF4Q9BRK5 362 aa12.03□□□□□ -0.48
USP6-205ENST00000574788 KIAA0754O94854 1291 aa12.02□□□□□ -0.48
USP6-205ENST00000574788 KINO60870 393 aaKnown RBP12.02□□□□□ -0.48
USP6-205ENST00000574788 API5Q9BZZ5 524 aaKnown RBP12.02□□□□□ -0.48
USP6-205ENST00000574788 STIM1Q13586 685 aa12.02□□□□□ -0.49
USP6-205ENST00000574788 LTV1Q96GA3 475 aaPredicted RBP12.02□□□□□ -0.49
USP6-205ENST00000574788 FEZ1Q99689 392 aa12.02□□□□□ -0.49
USP6-205ENST00000574788 CCDC39Q9UFE4 941 aa12.02□□□□□ -0.49
USP6-205ENST00000574788 MYBBP1AQ9BQG0 1328 aaKnown RBP12.02□□□□□ -0.49
USP6-205ENST00000574788 JMYQ8N9B5 988 aa12.02□□□□□ -0.49
USP6-205ENST00000574788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.02□□□□□ -0.49
USP6-205ENST00000574788 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.49
USP6-205ENST00000574788 CT47B1P0C2W7 299 aaPredicted RBP12.01□□□□□ -0.49
USP6-205ENST00000574788 HIP1O00291 1037 aa12.01□□□□□ -0.49
USP6-205ENST00000574788 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
USP6-205ENST00000574788 MCM2P49736 904 aa12□□□□□ -0.49
USP6-205ENST00000574788 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
USP6-205ENST00000574788 TSPYL1Q9H0U9 437 aa12□□□□□ -0.49
USP6-205ENST00000574788 CCDC144AA2RUR9 1427 aa12□□□□□ -0.49
USP6-205ENST00000574788 MPHOSPH9Q99550 1183 aa12□□□□□ -0.49
USP6-205ENST00000574788 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
USP6-205ENST00000574788 VPS37CA5D8V6 355 aaPredicted RBP12□□□□□ -0.49
USP6-205ENST00000574788 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
USP6-205ENST00000574788 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
USP6-205ENST00000574788 DYDC1Q8WWB3 177 aa11.99□□□□□ -0.49
USP6-205ENST00000574788 CUX2O14529 1486 aa11.99□□□□□ -0.49
USP6-205ENST00000574788 IKQ13123 557 aaPredicted RBP11.99□□□□□ -0.49
USP6-205ENST00000574788 ENOX2Q16206 610 aaKnown RBP11.99□□□□□ -0.49
USP6-205ENST00000574788 FBXW7Q969H0 707 aa11.99□□□□□ -0.49
USP6-205ENST00000574788 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
USP6-205ENST00000574788 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
USP6-205ENST00000574788 TBC1D2BQ9UPU7 963 aa11.99□□□□□ -0.49
USP6-205ENST00000574788 AXDND1Q5T1B0 1012 aaPredicted RBP11.99□□□□□ -0.49
USP6-205ENST00000574788 EIF3JO75822 258 aaKnown RBP11.98□□□□□ -0.49
USP6-205ENST00000574788 MBD3O95983 291 aa11.98□□□□□ -0.49
USP6-205ENST00000574788 VPS8Q8N3P4 1428 aa11.98□□□□□ -0.49
USP6-205ENST00000574788 PDILTQ8N807 584 aa11.98□□□□□ -0.49
USP6-205ENST00000574788 DACH1Q9UI36 760 aa11.97□□□□□ -0.49
USP6-205ENST00000574788 PDIA4P13667 645 aaKnown RBP11.97□□□□□ -0.49
USP6-205ENST00000574788 KIF3BO15066 747 aa11.97□□□□□ -0.49
USP6-205ENST00000574788 DEF6Q9H4E7 631 aa11.97□□□□□ -0.49
USP6-205ENST00000574788 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
USP6-205ENST00000574788 FOXD1Q16676 465 aa11.96□□□□□ -0.49
USP6-205ENST00000574788 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
USP6-205ENST00000574788 ZNF396Q96N95 335 aaPredicted RBP11.96□□□□□ -0.49
USP6-205ENST00000574788 ERLIN1O75477 346 aa11.96□□□□□ -0.5
USP6-205ENST00000574788 NASPP49321 788 aaPredicted RBP11.96□□□□□ -0.5
USP6-205ENST00000574788 CCDC91Q7Z6B0 441 aa11.95□□□□□ -0.5
USP6-205ENST00000574788 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
USP6-205ENST00000574788 KRT18P05783 430 aaKnown RBP11.95□□□□□ -0.5
USP6-205ENST00000574788 ANKRD62A6NC57 917 aa11.95□□□□□ -0.5
USP6-205ENST00000574788 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
USP6-205ENST00000574788 SYTL4Q96C24 671 aaPredicted RBP11.94□□□□□ -0.5
USP6-205ENST00000574788 PSME1Q06323 249 aa11.94□□□□□ -0.5
USP6-205ENST00000574788 PDCL3Q9H2J4 239 aa11.94□□□□□ -0.5
USP6-205ENST00000574788 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
USP6-205ENST00000574788 PDE4AP27815 886 aa11.94□□□□□ -0.5
USP6-205ENST00000574788 FKBP5Q13451 457 aaPredicted RBP11.94□□□□□ -0.5
USP6-205ENST00000574788 TRIM5Q9C035 493 aa11.94□□□□□ -0.5
USP6-205ENST00000574788 PPM1EQ8WY54 764 aa11.93□□□□□ -0.5
USP6-205ENST00000574788 STAMBPO95630 424 aa11.93□□□□□ -0.5
USP6-205ENST00000574788 PRDM2Q13029 1718 aa11.93□□□□□ -0.5
USP6-205ENST00000574788 CETN2P41208 172 aa11.93□□□□□ -0.5
USP6-205ENST00000574788 CCDC181Q5TID7 509 aa11.93□□□□□ -0.5
USP6-205ENST00000574788 CLASRPQ8N2M8 674 aaKnown RBP11.93□□□□□ -0.5
USP6-205ENST00000574788 CCDC27Q2M243 656 aa11.93□□□□□ -0.5
USP6-205ENST00000574788 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
USP6-205ENST00000574788 DZIP1LQ8IYY4 767 aaKnown RBP11.93□□□□□ -0.5
USP6-205ENST00000574788 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
USP6-205ENST00000574788 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
USP6-205ENST00000574788 PDS5BQ9NTI5 1447 aa11.92□□□□□ -0.5
USP6-205ENST00000574788 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
USP6-205ENST00000574788 MRE11P49959 708 aa11.92□□□□□ -0.5
USP6-205ENST00000574788 CCDC97Q96F63 343 aaPredicted RBP11.92□□□□□ -0.5
USP6-205ENST00000574788 WASHC4Q2M389 1173 aa11.92□□□□□ -0.5
USP6-205ENST00000574788 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
USP6-205ENST00000574788 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
USP6-205ENST00000574788 PPFIBP1Q86W92 1011 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 PLCD4Q9BRC7 762 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 GNAI1P63096 354 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 RAB3GAP2Q9H2M9 1393 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 TRIM22Q8IYM9 498 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 CCDC112Q8NEF3 446 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 ERC1Q8IUD2 1116 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.91□□□□□ -0.5
USP6-205ENST00000574788 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 SMC2O95347 1197 aa11.91□□□□□ -0.5
USP6-205ENST00000574788 NEBLO76041 1014 aa11.9□□□□□ -0.5
USP6-205ENST00000574788 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
USP6-205ENST00000574788 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
USP6-205ENST00000574788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
USP6-205ENST00000574788 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
USP6-205ENST00000574788 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
USP6-205ENST00000574788 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
USP6-205ENST00000574788 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
USP6-205ENST00000574788 DIAPH1O60610 1272 aaKnown RBP11.89□□□□□ -0.51
USP6-205ENST00000574788 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
USP6-205ENST00000574788 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms