RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 SLAIN2Q9P270 581 aa34.77■■■■□ 3.16
LITAF-213ENST00000574701 CDC42BPGQ6DT37 1551 aa34.77■■■■□ 3.16
LITAF-213ENST00000574701 ARHGEF28Q8N1W1 1705 aaKnown RBP34.77■■■■□ 3.16
LITAF-213ENST00000574701 POGKQ9P215 609 aa34.76■■■■□ 3.16
LITAF-213ENST00000574701 PRAM1Q96QH2 718 aa34.75■■■■□ 3.15
LITAF-213ENST00000574701 NBPF1Q3BBV0 1214 aa34.74■■■■□ 3.15
LITAF-213ENST00000574701 ROCK2O75116 1388 aaKnown RBP34.72■■■■□ 3.15
LITAF-213ENST00000574701 MST1RQ04912 1400 aa34.72■■■■□ 3.15
LITAF-213ENST00000574701 SAFB2Q14151 953 aaKnown RBP eCLIP34.7■■■■□ 3.15
LITAF-213ENST00000574701 NBPF8Q3BBV2 869 aa34.68■■■■□ 3.14
LITAF-213ENST00000574701 TIMELESSQ9UNS1 1208 aa34.67■■■■□ 3.14
LITAF-213ENST00000574701 RALGAPBQ86X10 1494 aa34.65■■■■□ 3.14
LITAF-213ENST00000574701 ADGRB2O60241 1585 aa34.65■■■■□ 3.14
LITAF-213ENST00000574701 HSPA1LP34931 641 aa34.64■■■■□ 3.14
LITAF-213ENST00000574701 FMN2Q9NZ56 1722 aa34.64■■■■□ 3.14
LITAF-213ENST00000574701 C1orf167Q5SNV9 1468 aa34.62■■■■□ 3.13
LITAF-213ENST00000574701 GPRASP1Q5JY77 1395 aa34.59■■■■□ 3.13
LITAF-213ENST00000574701 EIF3AQ14152 1382 aaKnown RBP34.58■■■■□ 3.13
LITAF-213ENST00000574701 MINK1Q8N4C8 1332 aaPredicted RBP34.57■■■■□ 3.13
LITAF-213ENST00000574701 BRINP3Q76B58 766 aa34.57■■■■□ 3.12
LITAF-213ENST00000574701 PHLPP1O60346 1717 aa34.57■■■■□ 3.12
LITAF-213ENST00000574701 AHDC1Q5TGY3 1603 aaPredicted RBP34.55■■■■□ 3.12
LITAF-213ENST00000574701 QRICH2Q9H0J4 1663 aa34.54■■■■□ 3.12
LITAF-213ENST00000574701 CARD11Q9BXL7 1154 aa34.54■■■■□ 3.12
LITAF-213ENST00000574701 CENPJQ9HC77 1338 aaPredicted RBP34.54■■■■□ 3.12
LITAF-213ENST00000574701 HIRIP3Q9BW71 556 aaPredicted RBP34.53■■■■□ 3.12
LITAF-213ENST00000574701 NUTM2FA1L443 756 aa34.52■■■■□ 3.12
LITAF-213ENST00000574701 NHSL1Q5SYE7 1610 aa34.52■■■■□ 3.12
LITAF-213ENST00000574701 ANKARQ7Z5J8 1434 aa34.47■■■■□ 3.11
LITAF-213ENST00000574701 ESCO1Q5FWF5 840 aa34.47■■■■□ 3.11
LITAF-213ENST00000574701 ORAI2Q96SN7 254 aa34.47■■■■□ 3.11
LITAF-213ENST00000574701 TULP4Q9NRJ4 1543 aa34.46■■■■□ 3.11
LITAF-213ENST00000574701 COL16A1Q07092 1604 aaPredicted RBP34.46■■■■□ 3.11
LITAF-213ENST00000574701 WASLO00401 505 aaPredicted RBP34.46■■■■□ 3.11
LITAF-213ENST00000574701 KIF1AQ12756 1690 aa34.46■■■■□ 3.11
LITAF-213ENST00000574701 RGPD8O14715 1765 aaPredicted RBP34.44■■■■□ 3.1
LITAF-213ENST00000574701 USP32Q8NFA0 1604 aa34.42■■■■□ 3.1
LITAF-213ENST00000574701 ITSN1Q15811 1721 aa34.39■■■■□ 3.1
LITAF-213ENST00000574701 NPHP3Q7Z494 1330 aa34.36■■■■□ 3.09
LITAF-213ENST00000574701 CDK19Q9BWU1 502 aa34.35■■■■□ 3.09
LITAF-213ENST00000574701 ATP7BP35670 1465 aa34.34■■■■□ 3.09
LITAF-213ENST00000574701 DDX17Q92841 729 aaKnown RBP34.34■■■■□ 3.09
LITAF-213ENST00000574701 PHF8Q9UPP1 1060 aa34.34■■■■□ 3.09
LITAF-213ENST00000574701 JCADQ9P266 1359 aa34.33■■■■□ 3.09
LITAF-213ENST00000574701 PRR36Q9H6K5 1346 aa34.31■■■■□ 3.08
LITAF-213ENST00000574701 EVC2Q86UK5 1308 aa34.3■■■■□ 3.08
LITAF-213ENST00000574701 SRPK2P78362 688 aaKnown RBP34.3■■■■□ 3.08
LITAF-213ENST00000574701 SBNO2Q9Y2G9 1366 aa34.3■■■■□ 3.08
LITAF-213ENST00000574701 SHPRHQ149N8 1683 aa34.29■■■■□ 3.08
LITAF-213ENST00000574701 TOPAZ1Q8N9V7 1692 aa34.29■■■■□ 3.08
LITAF-213ENST00000574701 FOXO3O43524 673 aa34.29■■■■□ 3.08
LITAF-213ENST00000574701 SOS2Q07890 1332 aaPredicted RBP34.29■■■■□ 3.08
LITAF-213ENST00000574701 LRRC59Q96AG4 307 aaKnown RBP34.28■■■■□ 3.08
LITAF-213ENST00000574701 NUDT16Q96DE0 195 aaKnown RBP34.28■■■■□ 3.08
LITAF-213ENST00000574701 USP47Q96K76 1375 aa34.27■■■■□ 3.08
LITAF-213ENST00000574701 PXDNQ92626 1479 aa34.26■■■■□ 3.07
LITAF-213ENST00000574701 PMFBP1Q8TBY8 1022 aa34.25■■■■□ 3.07
LITAF-213ENST00000574701 CABP2Q9NPB3 220 aa34.23■■■■□ 3.07
LITAF-213ENST00000574701 MED1Q15648 1581 aaPredicted RBP34.22■■■■□ 3.07
LITAF-213ENST00000574701 XPCQ01831 940 aaPredicted RBP34.21■■■■□ 3.07
LITAF-213ENST00000574701 CCDC61Q9Y6R9 512 aa34.21■■■■□ 3.07
LITAF-213ENST00000574701 ST20-MTHFSA0A0A6YYL1 179 aa34.19■■■■□ 3.06
LITAF-213ENST00000574701 NGDNQ8NEJ9 315 aaKnown RBP34.19■■■■□ 3.06
LITAF-213ENST00000574701 PSME1Q06323 249 aa34.18■■■■□ 3.06
LITAF-213ENST00000574701 KRT28Q7Z3Y7 464 aa34.18■■■■□ 3.06
LITAF-213ENST00000574701 SPATA31A6Q5VVP1 1343 aa34.17■■■■□ 3.06
LITAF-213ENST00000574701 PPIP5K1Q6PFW1 1433 aa34.17■■■■□ 3.06
LITAF-213ENST00000574701 PNPLA6Q8IY17 1366 aa34.17■■■■□ 3.06
LITAF-213ENST00000574701 SLC24A1O60721 1099 aa34.16■■■■□ 3.06
LITAF-213ENST00000574701 ATAD2Q6PL18 1390 aa34.15■■■■□ 3.06
LITAF-213ENST00000574701 TNS3Q68CZ2 1445 aa34.12■■■■□ 3.05
LITAF-213ENST00000574701 TESK2Q96S53 571 aa34.11■■■■□ 3.05
LITAF-213ENST00000574701 SBNO1A3KN83 1393 aa34.11■■■■□ 3.05
LITAF-213ENST00000574701 POLR3AO14802 1390 aaPredicted RBP34.11■■■■□ 3.05
LITAF-213ENST00000574701 PLEKHG3A1L390 1219 aa34.1■■■■□ 3.05
LITAF-213ENST00000574701 COL22A1Q8NFW1 1626 aaPredicted RBP34.1■■■■□ 3.05
LITAF-213ENST00000574701 TRPM3Q9HCF6 1732 aaPredicted RBP34.09■■■■□ 3.05
LITAF-213ENST00000574701 ACEP12821 1306 aa34.08■■■■□ 3.05
LITAF-213ENST00000574701 SPATA31A3Q5VYP0 1347 aa34.08■■■■□ 3.05
LITAF-213ENST00000574701 TMF1P82094 1093 aa34.05■■■■□ 3.04
LITAF-213ENST00000574701 CABP1Q9NZU7 370 aa34.05■■■■□ 3.04
LITAF-213ENST00000574701 LRP6O75581 1613 aa34.04■■■■□ 3.04
LITAF-213ENST00000574701 ARHGEF10O15013 1369 aa34.04■■■■□ 3.04
LITAF-213ENST00000574701 DISP3Q9P2K9 1392 aa34.04■■■■□ 3.04
LITAF-213ENST00000574701 NUTM2BA6NNL0 878 aaPredicted RBP34.04■■■■□ 3.04
LITAF-213ENST00000574701 NUTM2EB1AL46 878 aaPredicted RBP34.04■■■■□ 3.04
LITAF-213ENST00000574701 EIF4G2P78344 907 aaKnown RBP eCLIP34.04■■■■□ 3.04
LITAF-213ENST00000574701 NUTM2AQ8IVF1 878 aaPredicted RBP34.04■■■■□ 3.04
LITAF-213ENST00000574701 PHF23Q9BUL5 403 aaPredicted RBP34.03■■■■□ 3.04
LITAF-213ENST00000574701 MEX3CQ5U5Q3 659 aaKnown RBP34.02■■■■□ 3.04
LITAF-213ENST00000574701 LMOD2Q6P5Q4 547 aa34.02■■■■□ 3.04
LITAF-213ENST00000574701 PUS7Q96PZ0 661 aaKnown RBP34.02■■■■□ 3.04
LITAF-213ENST00000574701 ALS2Q96Q42 1657 aa34.01■■■■□ 3.04
LITAF-213ENST00000574701 PAK3O75914 559 aaPredicted RBP34■■■■□ 3.03
LITAF-213ENST00000574701 AKAP12Q02952 1782 aa33.98■■■■□ 3.03
LITAF-213ENST00000574701 CDCA8Q53HL2 280 aa33.96■■■■□ 3.03
LITAF-213ENST00000574701 TMC1Q8TDI8 760 aa33.96■■■■□ 3.03
LITAF-213ENST00000574701 BRD4O60885 1362 aaPredicted RBP33.96■■■■□ 3.03
LITAF-213ENST00000574701 HSPA5P11021 654 aaKnown RBP33.95■■■■□ 3.03
LITAF-213ENST00000574701 USP6P35125 1406 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms