RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 PDE3BQ13370 1112 aa13.93□□□□□ -0.18
USP43-205ENST00000574408 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
USP43-205ENST00000574408 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
USP43-205ENST00000574408 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
USP43-205ENST00000574408 PUS7Q96PZ0 661 aaKnown RBP13.92□□□□□ -0.18
USP43-205ENST00000574408 ALKQ9UM73 1620 aa13.92□□□□□ -0.18
USP43-205ENST00000574408 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
USP43-205ENST00000574408 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
USP43-205ENST00000574408 PTPRMP28827 1452 aa13.91□□□□□ -0.18
USP43-205ENST00000574408 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
USP43-205ENST00000574408 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.18
USP43-205ENST00000574408 CGNL1Q0VF96 1302 aa13.89□□□□□ -0.19
USP43-205ENST00000574408 ANKRD36BQ8N2N9 1353 aa13.89□□□□□ -0.19
USP43-205ENST00000574408 TNRQ92752 1358 aa13.88□□□□□ -0.19
USP43-205ENST00000574408 CCDC146Q8IYE0 955 aa13.87□□□□□ -0.19
USP43-205ENST00000574408 B4GALNT3Q6L9W6 998 aa13.87□□□□□ -0.19
USP43-205ENST00000574408 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
USP43-205ENST00000574408 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP43-205ENST00000574408 ATAD2Q6PL18 1390 aa13.86□□□□□ -0.19
USP43-205ENST00000574408 PLEKHH1Q9ULM0 1364 aa13.85□□□□□ -0.19
USP43-205ENST00000574408 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
USP43-205ENST00000574408 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
USP43-205ENST00000574408 NINLQ9Y2I6 1382 aa13.85□□□□□ -0.19
USP43-205ENST00000574408 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
USP43-205ENST00000574408 CDK19Q9BWU1 502 aa13.84□□□□□ -0.19
USP43-205ENST00000574408 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
USP43-205ENST00000574408 RRP1P56182 461 aaKnown RBP13.84□□□□□ -0.19
USP43-205ENST00000574408 USP32Q8NFA0 1604 aa13.84□□□□□ -0.19
USP43-205ENST00000574408 APAF1O14727 1248 aa13.83□□□□□ -0.2
USP43-205ENST00000574408 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.2
USP43-205ENST00000574408 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
USP43-205ENST00000574408 CEBPAP49715 358 aaPredicted RBP13.82□□□□□ -0.2
USP43-205ENST00000574408 NSD2O96028 1365 aa13.82□□□□□ -0.2
USP43-205ENST00000574408 MTHFSP49914 203 aa13.82□□□□□ -0.2
USP43-205ENST00000574408 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
USP43-205ENST00000574408 METP08581 1390 aa13.81□□□□□ -0.2
USP43-205ENST00000574408 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
USP43-205ENST00000574408 DLC1Q96QB1 1528 aa13.81□□□□□ -0.2
USP43-205ENST00000574408 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
USP43-205ENST00000574408 TMEM2Q9UHN6 1383 aa13.8□□□□□ -0.2
USP43-205ENST00000574408 NRXN3Q9Y4C0 1643 aa13.8□□□□□ -0.2
USP43-205ENST00000574408 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
USP43-205ENST00000574408 GGNBP2Q9H3C7 697 aa13.8□□□□□ -0.2
USP43-205ENST00000574408 ZNF521Q96K83 1311 aa13.8□□□□□ -0.2
USP43-205ENST00000574408 HDGFL2Q7Z4V5 671 aaPredicted RBP13.8□□□□□ -0.2
USP43-205ENST00000574408 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
USP43-205ENST00000574408 CFAP53Q96M91 514 aa13.8□□□□□ -0.2
USP43-205ENST00000574408 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
USP43-205ENST00000574408 PRKCSHP14314 528 aaPredicted RBP13.78□□□□□ -0.2
USP43-205ENST00000574408 CCDC136Q96JN2 1154 aa13.78□□□□□ -0.2
USP43-205ENST00000574408 NBR1Q14596 966 aa13.78□□□□□ -0.2
USP43-205ENST00000574408 RBM19Q9Y4C8 960 aaKnown RBP13.78□□□□□ -0.2
USP43-205ENST00000574408 CD163L1Q9NR16 1453 aa13.78□□□□□ -0.2
USP43-205ENST00000574408 DUSP27Q5VZP5 1158 aa13.77□□□□□ -0.2
USP43-205ENST00000574408 UBR1Q8IWV7 1749 aa13.77□□□□□ -0.21
USP43-205ENST00000574408 FYB1O15117 783 aa13.76□□□□□ -0.21
USP43-205ENST00000574408 PLIN1O60240 522 aa13.76□□□□□ -0.21
USP43-205ENST00000574408 EXOC6Q8TAG9 804 aa13.76□□□□□ -0.21
USP43-205ENST00000574408 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
USP43-205ENST00000574408 SLFN5Q08AF3 891 aa13.75□□□□□ -0.21
USP43-205ENST00000574408 NLRP1Q9C000 1473 aa13.75□□□□□ -0.21
USP43-205ENST00000574408 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
USP43-205ENST00000574408 LTKP29376 864 aa13.75□□□□□ -0.21
USP43-205ENST00000574408 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
USP43-205ENST00000574408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP43-205ENST00000574408 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
USP43-205ENST00000574408 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
USP43-205ENST00000574408 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
USP43-205ENST00000574408 RRP7AQ9Y3A4 280 aaKnown RBP13.73□□□□□ -0.21
USP43-205ENST00000574408 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
USP43-205ENST00000574408 U2AF1L5P0DN76 240 aaPredicted RBP13.73□□□□□ -0.21
USP43-205ENST00000574408 U2AF1Q01081 240 aaKnown RBP eCLIP13.73□□□□□ -0.21
USP43-205ENST00000574408 TECPR2O15040 1411 aa13.72□□□□□ -0.21
USP43-205ENST00000574408 FAM135BQ49AJ0 1406 aa13.72□□□□□ -0.21
USP43-205ENST00000574408 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
USP43-205ENST00000574408 EID1Q9Y6B2 187 aa13.72□□□□□ -0.21
USP43-205ENST00000574408 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.21
USP43-205ENST00000574408 TCP11L2Q8N4U5 519 aa13.71□□□□□ -0.21
USP43-205ENST00000574408 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
USP43-205ENST00000574408 ATP7BP35670 1465 aa13.71□□□□□ -0.21
USP43-205ENST00000574408 E9PSI1 815 aa13.71□□□□□ -0.21
USP43-205ENST00000574408 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.21
USP43-205ENST00000574408 C3P01024 1663 aa13.71□□□□□ -0.21
USP43-205ENST00000574408 MED14O60244 1454 aa13.71□□□□□ -0.22
USP43-205ENST00000574408 WWC1Q8IX03 1113 aa13.71□□□□□ -0.22
USP43-205ENST00000574408 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.22
USP43-205ENST00000574408 PPIP5K1Q6PFW1 1433 aa13.71□□□□□ -0.22
USP43-205ENST00000574408 ROBO2Q9HCK4 1378 aa13.7□□□□□ -0.22
USP43-205ENST00000574408 TRMT2AQ8IZ69 625 aaKnown RBP13.7□□□□□ -0.22
USP43-205ENST00000574408 FER1L4A9Z1Z3 1794 aa13.7□□□□□ -0.22
USP43-205ENST00000574408 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
USP43-205ENST00000574408 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
USP43-205ENST00000574408 CPS1P31327 1500 aa13.69□□□□□ -0.22
USP43-205ENST00000574408 KNDC1Q76NI1 1749 aa13.69□□□□□ -0.22
USP43-205ENST00000574408 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
USP43-205ENST00000574408 ANKRD26Q9UPS8 1709 aa13.68□□□□□ -0.22
USP43-205ENST00000574408 CRBNQ96SW2 442 aa13.68□□□□□ -0.22
USP43-205ENST00000574408 NKTRP30414 1462 aaKnown RBP13.68□□□□□ -0.22
USP43-205ENST00000574408 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
USP43-205ENST00000574408 C20orf194Q5TEA3 1177 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms