RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
CTNS-208ENST00000574218 PPLO60437 1756 aa18.11■□□□□ 0.49
CTNS-208ENST00000574218 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.1■□□□□ 0.49
CTNS-208ENST00000574218 ESCO1Q5FWF5 840 aa18.1■□□□□ 0.49
CTNS-208ENST00000574218 CDC42BPGQ6DT37 1551 aa18.09■□□□□ 0.49
CTNS-208ENST00000574218 MYOM2P54296 1465 aa18.08■□□□□ 0.49
CTNS-208ENST00000574218 PRAG1Q86YV5 1406 aa18.08■□□□□ 0.49
CTNS-208ENST00000574218 LRPPRCP42704 1394 aaKnown RBP18.08■□□□□ 0.49
CTNS-208ENST00000574218 SRCAPQ6ZRS2 3230 aa18.08■□□□□ 0.48
CTNS-208ENST00000574218 RPGRIP1LQ68CZ1 1315 aa18.07■□□□□ 0.48
CTNS-208ENST00000574218 EP400Q96L91 3159 aa18.07■□□□□ 0.48
CTNS-208ENST00000574218 GJD4Q96KN9 370 aaPredicted RBP18.05■□□□□ 0.48
CTNS-208ENST00000574218 BCL9LQ86UU0 1499 aa18.05■□□□□ 0.48
CTNS-208ENST00000574218 PXDNQ92626 1479 aa18.05■□□□□ 0.48
CTNS-208ENST00000574218 BRWD3Q6RI45 1802 aa18.04■□□□□ 0.48
CTNS-208ENST00000574218 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
CTNS-208ENST00000574218 XPCQ01831 940 aaPredicted RBP18.03■□□□□ 0.48
CTNS-208ENST00000574218 SF3B2Q13435 895 aaKnown RBP18.03■□□□□ 0.48
CTNS-208ENST00000574218 FOXO3O43524 673 aa18.02■□□□□ 0.48
CTNS-208ENST00000574218 BLMP54132 1417 aaPredicted RBP18.01■□□□□ 0.47
CTNS-208ENST00000574218 NAIPQ13075 1403 aa18.01■□□□□ 0.47
CTNS-208ENST00000574218 HAP1P54257 671 aaPredicted RBP18.01■□□□□ 0.47
CTNS-208ENST00000574218 PPARGC1BQ86YN6 1023 aaKnown RBP18■□□□□ 0.47
CTNS-208ENST00000574218 UNC5CLQ8IV45 518 aa18■□□□□ 0.47
CTNS-208ENST00000574218 KNDC1Q76NI1 1749 aa18■□□□□ 0.47
CTNS-208ENST00000574218 GLI3P10071 1580 aa18■□□□□ 0.47
CTNS-208ENST00000574218 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
CTNS-208ENST00000574218 NUTM2FA1L443 756 aa17.99■□□□□ 0.47
CTNS-208ENST00000574218 RALGAPBQ86X10 1494 aa17.99■□□□□ 0.47
CTNS-208ENST00000574218 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
CTNS-208ENST00000574218 STK26Q9P289 416 aa17.98■□□□□ 0.47
CTNS-208ENST00000574218 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
CTNS-208ENST00000574218 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
CTNS-208ENST00000574218 IFT172Q9UG01 1749 aa17.96■□□□□ 0.47
CTNS-208ENST00000574218 NWD2Q9ULI1 1742 aa17.96■□□□□ 0.47
CTNS-208ENST00000574218 SLIT2O94813 1529 aa17.96■□□□□ 0.47
CTNS-208ENST00000574218 RGPD8O14715 1765 aaPredicted RBP17.96■□□□□ 0.47
CTNS-208ENST00000574218 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
CTNS-208ENST00000574218 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
CTNS-208ENST00000574218 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
CTNS-208ENST00000574218 SPATA31A3Q5VYP0 1347 aa17.94■□□□□ 0.46
CTNS-208ENST00000574218 LRP5O75197 1615 aa17.94■□□□□ 0.46
CTNS-208ENST00000574218 TECPR2O15040 1411 aa17.93■□□□□ 0.46
CTNS-208ENST00000574218 WAPLQ7Z5K2 1190 aa17.93■□□□□ 0.46
CTNS-208ENST00000574218 KRT28Q7Z3Y7 464 aa17.92■□□□□ 0.46
CTNS-208ENST00000574218 DEFB132Q7Z7B7 95 aa17.92■□□□□ 0.46
CTNS-208ENST00000574218 A0A0G2JS52 829 aa17.91■□□□□ 0.46
CTNS-208ENST00000574218 MYT1Q01538 1121 aa17.91■□□□□ 0.46
CTNS-208ENST00000574218 PSME1Q06323 249 aa17.91■□□□□ 0.46
CTNS-208ENST00000574218 SEPT12Q8IYM1 358 aa17.91■□□□□ 0.46
CTNS-208ENST00000574218 ABCA3Q99758 1704 aa17.91■□□□□ 0.46
CTNS-208ENST00000574218 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
CTNS-208ENST00000574218 ADGRF5Q8IZF2 1346 aa17.9■□□□□ 0.46
CTNS-208ENST00000574218 ANKRD30BQ9BXX2 1392 aa17.9■□□□□ 0.46
CTNS-208ENST00000574218 TNS3Q68CZ2 1445 aa17.89■□□□□ 0.46
CTNS-208ENST00000574218 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
CTNS-208ENST00000574218 VPS72Q15906 364 aa17.89■□□□□ 0.45
CTNS-208ENST00000574218 LMOD2Q6P5Q4 547 aa17.89■□□□□ 0.45
CTNS-208ENST00000574218 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
CTNS-208ENST00000574218 BAG6P46379 1132 aa17.88■□□□□ 0.45
CTNS-208ENST00000574218 KRT27Q7Z3Y8 459 aa17.88■□□□□ 0.45
CTNS-208ENST00000574218 TMEM132EQ6IEE7 984 aa17.87■□□□□ 0.45
CTNS-208ENST00000574218 PLEKHH1Q9ULM0 1364 aa17.87■□□□□ 0.45
CTNS-208ENST00000574218 PHF8Q9UPP1 1060 aa17.86■□□□□ 0.45
CTNS-208ENST00000574218 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
CTNS-208ENST00000574218 YTHDC2Q9H6S0 1430 aaKnown RBP17.86■□□□□ 0.45
CTNS-208ENST00000574218 RGPD1P0DJD0 1748 aa17.86■□□□□ 0.45
CTNS-208ENST00000574218 CABLES1Q8TDN4 633 aa17.84■□□□□ 0.45
CTNS-208ENST00000574218 PIK3C2GO75747 1445 aa17.83■□□□□ 0.45
CTNS-208ENST00000574218 SBNO1A3KN83 1393 aa17.83■□□□□ 0.45
CTNS-208ENST00000574218 NRAPQ86VF7 1730 aa17.83■□□□□ 0.44
CTNS-208ENST00000574218 PSDA5PKW4 1024 aaPredicted RBP17.82■□□□□ 0.44
CTNS-208ENST00000574218 NRXN1Q9ULB1 1477 aa17.82■□□□□ 0.44
CTNS-208ENST00000574218 SPATA31E1Q6ZUB1 1445 aa17.81■□□□□ 0.44
CTNS-208ENST00000574218 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
CTNS-208ENST00000574218 DHX57Q6P158 1386 aaKnown RBP17.8■□□□□ 0.44
CTNS-208ENST00000574218 SIRT1Q96EB6 747 aa17.8■□□□□ 0.44
CTNS-208ENST00000574218 COL14A1Q05707 1796 aaKnown RBP17.8■□□□□ 0.44
CTNS-208ENST00000574218 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
CTNS-208ENST00000574218 HRCP23327 699 aa17.77■□□□□ 0.44
CTNS-208ENST00000574218 SAFB2Q14151 953 aaKnown RBP eCLIP17.77■□□□□ 0.44
CTNS-208ENST00000574218 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
CTNS-208ENST00000574218 ADGRB2O60241 1585 aa17.76■□□□□ 0.43
CTNS-208ENST00000574218 BTG4Q9NY30 223 aa17.76■□□□□ 0.43
CTNS-208ENST00000574218 POGKQ9P215 609 aa17.76■□□□□ 0.43
CTNS-208ENST00000574218 ANKARQ7Z5J8 1434 aa17.75■□□□□ 0.43
CTNS-208ENST00000574218 FAM83GA6ND36 823 aa17.75■□□□□ 0.43
CTNS-208ENST00000574218 PMFBP1Q8TBY8 1022 aa17.75■□□□□ 0.43
CTNS-208ENST00000574218 PRAM1Q96QH2 718 aa17.75■□□□□ 0.43
CTNS-208ENST00000574218 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
CTNS-208ENST00000574218 EN1Q05925 392 aaPredicted RBP17.74■□□□□ 0.43
CTNS-208ENST00000574218 MPHOSPH9Q99550 1183 aa17.74■□□□□ 0.43
CTNS-208ENST00000574218 C14orf93Q9H972 538 aaKnown RBP17.74■□□□□ 0.43
CTNS-208ENST00000574218 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
CTNS-208ENST00000574218 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
CTNS-208ENST00000574218 EIF3AQ14152 1382 aaKnown RBP17.73■□□□□ 0.43
CTNS-208ENST00000574218 DLC1Q96QB1 1528 aa17.72■□□□□ 0.43
CTNS-208ENST00000574218 R3HDM1Q15032 1099 aaKnown RBP17.71■□□□□ 0.43
CTNS-208ENST00000574218 CFAP70Q5T0N1 1121 aa17.71■□□□□ 0.43
CTNS-208ENST00000574218 ITSN1Q15811 1721 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms