RNA–Protein interactions for RNA: ENST00000574132.5

RAB40B-209, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-209ENST00000574132 ADGRF5Q8IZF2 1346 aa22.72■■□□□ 1.23
RAB40B-209ENST00000574132 PRAG1Q86YV5 1406 aa22.7■■□□□ 1.22
RAB40B-209ENST00000574132 ANKRD30BQ9BXX2 1392 aa22.68■■□□□ 1.22
RAB40B-209ENST00000574132 NPHP3Q7Z494 1330 aa22.68■■□□□ 1.22
RAB40B-209ENST00000574132 NUTM2FA1L443 756 aa22.68■■□□□ 1.22
RAB40B-209ENST00000574132 USP21Q9UK80 565 aa22.68■■□□□ 1.22
RAB40B-209ENST00000574132 WAPLQ7Z5K2 1190 aa22.67■■□□□ 1.22
RAB40B-209ENST00000574132 TMEM132EQ6IEE7 984 aa22.66■■□□□ 1.22
RAB40B-209ENST00000574132 LAMC1P11047 1609 aa22.65■■□□□ 1.22
RAB40B-209ENST00000574132 FOXO3O43524 673 aa22.65■■□□□ 1.22
RAB40B-209ENST00000574132 XPCQ01831 940 aaPredicted RBP22.65■■□□□ 1.22
RAB40B-209ENST00000574132 RGS12O14924 1447 aa22.65■■□□□ 1.22
RAB40B-209ENST00000574132 TRPC5Q9UL62 973 aaPredicted RBP22.64■■□□□ 1.21
RAB40B-209ENST00000574132 LRPPRCP42704 1394 aaKnown RBP22.63■■□□□ 1.21
RAB40B-209ENST00000574132 CDC42BPGQ6DT37 1551 aa22.63■■□□□ 1.21
RAB40B-209ENST00000574132 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
RAB40B-209ENST00000574132 ABCC11Q96J66 1382 aa22.6■■□□□ 1.21
RAB40B-209ENST00000574132 PLEKHH1Q9ULM0 1364 aa22.59■■□□□ 1.21
RAB40B-209ENST00000574132 TECPR2O15040 1411 aa22.58■■□□□ 1.21
RAB40B-209ENST00000574132 FNBP4Q8N3X1 1017 aaPredicted RBP22.58■■□□□ 1.21
RAB40B-209ENST00000574132 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
RAB40B-209ENST00000574132 PIK3C2GO75747 1445 aa22.57■■□□□ 1.2
RAB40B-209ENST00000574132 YTHDC2Q9H6S0 1430 aaKnown RBP22.56■■□□□ 1.2
RAB40B-209ENST00000574132 PXDNQ92626 1479 aa22.55■■□□□ 1.2
RAB40B-209ENST00000574132 ATAD2Q6PL18 1390 aa22.55■■□□□ 1.2
RAB40B-209ENST00000574132 IFT172Q9UG01 1749 aa22.55■■□□□ 1.2
RAB40B-209ENST00000574132 COL22A1Q8NFW1 1626 aaPredicted RBP22.55■■□□□ 1.2
RAB40B-209ENST00000574132 MYOM2P54296 1465 aa22.54■■□□□ 1.2
RAB40B-209ENST00000574132 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
RAB40B-209ENST00000574132 KNDC1Q76NI1 1749 aa22.52■■□□□ 1.2
RAB40B-209ENST00000574132 HAP1P54257 671 aaPredicted RBP22.52■■□□□ 1.2
RAB40B-209ENST00000574132 C14orf93Q9H972 538 aaKnown RBP22.52■■□□□ 1.2
RAB40B-209ENST00000574132 ATRNO75882 1429 aa22.51■■□□□ 1.19
RAB40B-209ENST00000574132 SAFB2Q14151 953 aaKnown RBP eCLIP22.51■■□□□ 1.19
RAB40B-209ENST00000574132 CFAP70Q5T0N1 1121 aa22.51■■□□□ 1.19
RAB40B-209ENST00000574132 KRT28Q7Z3Y7 464 aa22.51■■□□□ 1.19
RAB40B-209ENST00000574132 PLEKHG5O94827 1062 aa22.5■■□□□ 1.19
RAB40B-209ENST00000574132 SIRT1Q96EB6 747 aa22.49■■□□□ 1.19
RAB40B-209ENST00000574132 SPATA31A3Q5VYP0 1347 aa22.49■■□□□ 1.19
RAB40B-209ENST00000574132 PSME1Q06323 249 aa22.48■■□□□ 1.19
RAB40B-209ENST00000574132 POGKQ9P215 609 aa22.48■■□□□ 1.19
RAB40B-209ENST00000574132 PHF8Q9UPP1 1060 aa22.48■■□□□ 1.19
RAB40B-209ENST00000574132 FMN2Q9NZ56 1722 aa22.48■■□□□ 1.19
RAB40B-209ENST00000574132 LMOD2Q6P5Q4 547 aa22.47■■□□□ 1.19
RAB40B-209ENST00000574132 GJD4Q96KN9 370 aaPredicted RBP22.47■■□□□ 1.19
RAB40B-209ENST00000574132 PRAM1Q96QH2 718 aa22.47■■□□□ 1.19
RAB40B-209ENST00000574132 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
RAB40B-209ENST00000574132 BCL9LQ86UU0 1499 aa22.46■■□□□ 1.19
RAB40B-209ENST00000574132 UNC5CLQ8IV45 518 aa22.44■■□□□ 1.18
RAB40B-209ENST00000574132 RAB3GAP2Q9H2M9 1393 aa22.44■■□□□ 1.18
RAB40B-209ENST00000574132 MARF1Q9Y4F3 1742 aaKnown RBP22.44■■□□□ 1.18
RAB40B-209ENST00000574132 NRXN1Q9ULB1 1477 aa22.41■■□□□ 1.18
RAB40B-209ENST00000574132 CABLES1Q8TDN4 633 aa22.41■■□□□ 1.18
RAB40B-209ENST00000574132 KDM2AQ9Y2K7 1162 aa22.41■■□□□ 1.18
RAB40B-209ENST00000574132 TNS3Q68CZ2 1445 aa22.4■■□□□ 1.18
RAB40B-209ENST00000574132 PMFBP1Q8TBY8 1022 aa22.4■■□□□ 1.18
RAB40B-209ENST00000574132 TRAK1Q9UPV9 953 aa22.4■■□□□ 1.18
RAB40B-209ENST00000574132 CCDC9Q9Y3X0 531 aaKnown RBP22.4■■□□□ 1.18
RAB40B-209ENST00000574132 RGPD8O14715 1765 aaPredicted RBP22.39■■□□□ 1.17
RAB40B-209ENST00000574132 CCDC125Q86Z20 511 aa22.38■■□□□ 1.17
RAB40B-209ENST00000574132 HIRIP3Q9BW71 556 aaPredicted RBP22.37■■□□□ 1.17
RAB40B-209ENST00000574132 ZRANB1Q9UGI0 708 aa22.37■■□□□ 1.17
RAB40B-209ENST00000574132 SLIT2O94813 1529 aa22.36■■□□□ 1.17
RAB40B-209ENST00000574132 RALGAPBQ86X10 1494 aa22.36■■□□□ 1.17
RAB40B-209ENST00000574132 USP32Q8NFA0 1604 aa22.36■■□□□ 1.17
RAB40B-209ENST00000574132 DCAF11Q8TEB1 546 aa22.36■■□□□ 1.17
RAB40B-209ENST00000574132 SBNO1A3KN83 1393 aa22.36■■□□□ 1.17
RAB40B-209ENST00000574132 ARHGEF10O15013 1369 aa22.36■■□□□ 1.17
RAB40B-209ENST00000574132 MINK1Q8N4C8 1332 aaPredicted RBP22.35■■□□□ 1.17
RAB40B-209ENST00000574132 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.34■■□□□ 1.17
RAB40B-209ENST00000574132 DLC1Q96QB1 1528 aa22.34■■□□□ 1.17
RAB40B-209ENST00000574132 ANKARQ7Z5J8 1434 aa22.33■■□□□ 1.17
RAB40B-209ENST00000574132 A0A0G2JS52 829 aa22.32■■□□□ 1.16
RAB40B-209ENST00000574132 MYT1Q01538 1121 aa22.32■■□□□ 1.16
RAB40B-209ENST00000574132 EIF3AQ14152 1382 aaKnown RBP22.31■■□□□ 1.16
RAB40B-209ENST00000574132 GPRASP1Q5JY77 1395 aa22.31■■□□□ 1.16
RAB40B-209ENST00000574132 VPS72Q15906 364 aa22.31■■□□□ 1.16
RAB40B-209ENST00000574132 SEPT12Q8IYM1 358 aa22.31■■□□□ 1.16
RAB40B-209ENST00000574132 GLI3P10071 1580 aa22.3■■□□□ 1.16
RAB40B-209ENST00000574132 SF3B2Q13435 895 aaKnown RBP22.3■■□□□ 1.16
RAB40B-209ENST00000574132 NGDNQ8NEJ9 315 aaKnown RBP22.29■■□□□ 1.16
RAB40B-209ENST00000574132 EP400Q96L91 3159 aa22.28■■□□□ 1.16
RAB40B-209ENST00000574132 ADGRB1O14514 1584 aa22.28■■□□□ 1.16
RAB40B-209ENST00000574132 FAM83GA6ND36 823 aa22.27■■□□□ 1.16
RAB40B-209ENST00000574132 WASLO00401 505 aaPredicted RBP22.27■■□□□ 1.16
RAB40B-209ENST00000574132 PAK3O75914 559 aaPredicted RBP22.27■■□□□ 1.16
RAB40B-209ENST00000574132 STAC3Q96MF2 364 aa22.27■■□□□ 1.16
RAB40B-209ENST00000574132 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
RAB40B-209ENST00000574132 BLMP54132 1417 aaPredicted RBP22.26■■□□□ 1.15
RAB40B-209ENST00000574132 PLCH1Q4KWH8 1693 aa22.24■■□□□ 1.15
RAB40B-209ENST00000574132 KRT27Q7Z3Y8 459 aa22.24■■□□□ 1.15
RAB40B-209ENST00000574132 PRR36Q9H6K5 1346 aa22.24■■□□□ 1.15
RAB40B-209ENST00000574132 TULP4Q9NRJ4 1543 aa22.23■■□□□ 1.15
RAB40B-209ENST00000574132 BTG4Q9NY30 223 aa22.23■■□□□ 1.15
RAB40B-209ENST00000574132 NWD2Q9ULI1 1742 aa22.23■■□□□ 1.15
RAB40B-209ENST00000574132 DEFB132Q7Z7B7 95 aa22.22■■□□□ 1.15
RAB40B-209ENST00000574132 ABCA3Q99758 1704 aa22.22■■□□□ 1.15
RAB40B-209ENST00000574132 FAM98CQ17RN3 349 aaKnown RBP22.21■■□□□ 1.15
RAB40B-209ENST00000574132 BRWD3Q6RI45 1802 aa22.21■■□□□ 1.15
RAB40B-209ENST00000574132 SRCAPQ6ZRS2 3230 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms