RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 PPP4R2Q9NY27 417 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 CEP152O94986 1710 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 RALGAPBQ86X10 1494 aa9.83□□□□□ -0.84
RPA1-207ENST00000574049 HSP90AA1P07900 732 aaKnown RBP9.83□□□□□ -0.84
RPA1-207ENST00000574049 CCDC146Q8IYE0 955 aa9.83□□□□□ -0.84
RPA1-207ENST00000574049 E9PCH4 1651 aa9.83□□□□□ -0.84
RPA1-207ENST00000574049 NUTM2GQ5VZR2 741 aa9.83□□□□□ -0.84
RPA1-207ENST00000574049 NGDNQ8NEJ9 315 aaKnown RBP9.83□□□□□ -0.84
RPA1-207ENST00000574049 CCER2I3L3R5 266 aa9.82□□□□□ -0.84
RPA1-207ENST00000574049 HDGFL2Q7Z4V5 671 aaPredicted RBP9.82□□□□□ -0.84
RPA1-207ENST00000574049 GLIPR1L2Q4G1C9 344 aa9.82□□□□□ -0.84
RPA1-207ENST00000574049 EFCAB6Q5THR3 1501 aa9.82□□□□□ -0.84
RPA1-207ENST00000574049 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.82□□□□□ -0.84
RPA1-207ENST00000574049 FBLN1P23142 703 aa9.81□□□□□ -0.84
RPA1-207ENST00000574049 CLTCL1P53675 1640 aa9.81□□□□□ -0.84
RPA1-207ENST00000574049 UHRF1BP1Q6BDS2 1440 aa9.81□□□□□ -0.84
RPA1-207ENST00000574049 SCAF11Q99590 1463 aaKnown RBP9.81□□□□□ -0.84
RPA1-207ENST00000574049 TRPM2O94759 1503 aa9.8□□□□□ -0.84
RPA1-207ENST00000574049 PPRC1Q5VV67 1664 aaKnown RBP9.8□□□□□ -0.84
RPA1-207ENST00000574049 TERF2IPQ9NYB0 399 aa9.8□□□□□ -0.84
RPA1-207ENST00000574049 TET3O43151 1660 aa9.8□□□□□ -0.84
RPA1-207ENST00000574049 ERVK-7P63135 1459 aa9.8□□□□□ -0.84
RPA1-207ENST00000574049 XPCQ01831 940 aaPredicted RBP9.79□□□□□ -0.84
RPA1-207ENST00000574049 PROSER2Q86WR7 435 aaPredicted RBP9.79□□□□□ -0.84
RPA1-207ENST00000574049 RICTORQ6R327 1708 aa9.79□□□□□ -0.84
RPA1-207ENST00000574049 RALBP1Q15311 655 aa9.79□□□□□ -0.84
RPA1-207ENST00000574049 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
RPA1-207ENST00000574049 KCNA6P17658 529 aa9.78□□□□□ -0.84
RPA1-207ENST00000574049 NLRP13Q86W25 1043 aa9.78□□□□□ -0.84
RPA1-207ENST00000574049 SKAP1Q86WV1 359 aa9.78□□□□□ -0.84
RPA1-207ENST00000574049 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
RPA1-207ENST00000574049 RNF17Q9BXT8 1623 aaKnown RBP9.78□□□□□ -0.84
RPA1-207ENST00000574049 KIF13AQ9H1H9 1805 aa9.78□□□□□ -0.84
RPA1-207ENST00000574049 PLEKHH1Q9ULM0 1364 aa9.77□□□□□ -0.85
RPA1-207ENST00000574049 NUDT16Q96DE0 195 aaKnown RBP9.77□□□□□ -0.85
RPA1-207ENST00000574049 METP08581 1390 aa9.77□□□□□ -0.85
RPA1-207ENST00000574049 TMEM2Q9UHN6 1383 aa9.77□□□□□ -0.85
RPA1-207ENST00000574049 MYBBP1AQ9BQG0 1328 aaKnown RBP9.77□□□□□ -0.85
RPA1-207ENST00000574049 MROH1Q8NDA8 1641 aa9.76□□□□□ -0.85
RPA1-207ENST00000574049 CDK11BP21127 795 aaKnown RBP9.76□□□□□ -0.85
RPA1-207ENST00000574049 ESCO1Q5FWF5 840 aa9.76□□□□□ -0.85
RPA1-207ENST00000574049 BCL2L13Q9BXK5 485 aa9.76□□□□□ -0.85
RPA1-207ENST00000574049 CARD14Q9BXL6 1004 aa9.76□□□□□ -0.85
RPA1-207ENST00000574049 CGNL1Q0VF96 1302 aa9.75□□□□□ -0.85
RPA1-207ENST00000574049 CLTCQ00610 1675 aaKnown RBP9.75□□□□□ -0.85
RPA1-207ENST00000574049 U2AF1L5P0DN76 240 aaPredicted RBP9.75□□□□□ -0.85
RPA1-207ENST00000574049 U2AF1Q01081 240 aaKnown RBP eCLIP9.75□□□□□ -0.85
RPA1-207ENST00000574049 ARHGAP31Q2M1Z3 1444 aa9.75□□□□□ -0.85
RPA1-207ENST00000574049 APBB1O00213 710 aa9.75□□□□□ -0.85
RPA1-207ENST00000574049 LTV1Q96GA3 475 aaPredicted RBP9.75□□□□□ -0.85
RPA1-207ENST00000574049 CFAP53Q96M91 514 aa9.75□□□□□ -0.85
RPA1-207ENST00000574049 SPHKAPQ2M3C7 1700 aa9.75□□□□□ -0.85
RPA1-207ENST00000574049 WASLO00401 505 aaPredicted RBP9.75□□□□□ -0.85
RPA1-207ENST00000574049 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
RPA1-207ENST00000574049 IL27Q8NEV9 243 aa9.74□□□□□ -0.85
RPA1-207ENST00000574049 SLKQ9H2G2 1235 aaPredicted RBP9.74□□□□□ -0.85
RPA1-207ENST00000574049 GPRASP1Q5JY77 1395 aa9.74□□□□□ -0.85
RPA1-207ENST00000574049 YTHDC2Q9H6S0 1430 aaKnown RBP9.74□□□□□ -0.85
RPA1-207ENST00000574049 PPP2R1AP30153 589 aa9.74□□□□□ -0.85
RPA1-207ENST00000574049 MTHFSP49914 203 aa9.74□□□□□ -0.85
RPA1-207ENST00000574049 ZRANB1Q9UGI0 708 aa9.74□□□□□ -0.85
RPA1-207ENST00000574049 EIF2AK4Q9P2K8 1649 aaKnown RBP9.74□□□□□ -0.85
RPA1-207ENST00000574049 GZF1Q9H116 711 aaPredicted RBP9.73□□□□□ -0.85
RPA1-207ENST00000574049 CCDC61Q9Y6R9 512 aa9.73□□□□□ -0.85
RPA1-207ENST00000574049 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
RPA1-207ENST00000574049 FTSJ3Q8IY81 847 aaKnown RBP9.73□□□□□ -0.85
RPA1-207ENST00000574049 ARHGEF40Q8TER5 1519 aa9.73□□□□□ -0.85
RPA1-207ENST00000574049 A2ML1A8K2U0 1454 aa9.73□□□□□ -0.85
RPA1-207ENST00000574049 NME9Q86XW9 330 aa9.73□□□□□ -0.85
RPA1-207ENST00000574049 ZMYM4Q5VZL5 1548 aa9.73□□□□□ -0.85
RPA1-207ENST00000574049 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
RPA1-207ENST00000574049 CAMSAP1Q5T5Y3 1602 aa9.72□□□□□ -0.85
RPA1-207ENST00000574049 PSME1Q06323 249 aa9.72□□□□□ -0.85
RPA1-207ENST00000574049 ADAMTS8Q9UP79 889 aa9.72□□□□□ -0.85
RPA1-207ENST00000574049 LMTK2Q8IWU2 1503 aa9.72□□□□□ -0.85
RPA1-207ENST00000574049 KIF1BO60333 1816 aa9.72□□□□□ -0.85
RPA1-207ENST00000574049 MSH5O43196 834 aa9.72□□□□□ -0.85
RPA1-207ENST00000574049 FOXO3O43524 673 aa9.72□□□□□ -0.85
RPA1-207ENST00000574049 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
RPA1-207ENST00000574049 VWDEQ8N2E2 1590 aa9.71□□□□□ -0.85
RPA1-207ENST00000574049 PIK3C2GO75747 1445 aa9.71□□□□□ -0.85
RPA1-207ENST00000574049 ELL2O00472 640 aaPredicted RBP9.71□□□□□ -0.85
RPA1-207ENST00000574049 RRS1Q15050 365 aaKnown RBP9.71□□□□□ -0.86
RPA1-207ENST00000574049 EXOC6Q8TAG9 804 aa9.71□□□□□ -0.86
RPA1-207ENST00000574049 COG3Q96JB2 828 aa9.71□□□□□ -0.86
RPA1-207ENST00000574049 NLRP6P59044 892 aa9.71□□□□□ -0.86
RPA1-207ENST00000574049 TBX22Q9Y458 520 aa9.7□□□□□ -0.86
RPA1-207ENST00000574049 AGLP35573 1532 aa9.7□□□□□ -0.86
RPA1-207ENST00000574049 SYNMO15061 1565 aa9.7□□□□□ -0.86
RPA1-207ENST00000574049 ATF3P18847 181 aa9.7□□□□□ -0.86
RPA1-207ENST00000574049 PNISRQ8TF01 805 aaKnown RBP9.7□□□□□ -0.86
RPA1-207ENST00000574049 MAPK8IP3Q9UPT6 1336 aa9.7□□□□□ -0.86
RPA1-207ENST00000574049 DEPDC5O75140 1603 aa9.7□□□□□ -0.86
RPA1-207ENST00000574049 APAF1O14727 1248 aa9.69□□□□□ -0.86
RPA1-207ENST00000574049 TCERG1O14776 1098 aaKnown RBP9.69□□□□□ -0.86
RPA1-207ENST00000574049 NUDCQ9Y266 331 aa9.69□□□□□ -0.86
RPA1-207ENST00000574049 HMOX1P09601 288 aa9.69□□□□□ -0.86
RPA1-207ENST00000574049 ABTB2Q8N961 1025 aa9.69□□□□□ -0.86
RPA1-207ENST00000574049 NAP1L5Q96NT1 182 aaPredicted RBP9.68□□□□□ -0.86
RPA1-207ENST00000574049 CHMP4AQ9BY43 222 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms