RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 NRXN1Q9ULB1 1477 aa16.66■□□□□ 0.26
RPAIN-214ENST00000574003 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
RPAIN-214ENST00000574003 ABCC11Q96J66 1382 aa16.64■□□□□ 0.26
RPAIN-214ENST00000574003 TECPR2O15040 1411 aa16.64■□□□□ 0.25
RPAIN-214ENST00000574003 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
RPAIN-214ENST00000574003 MYOM2P54296 1465 aa16.64■□□□□ 0.25
RPAIN-214ENST00000574003 SPATA31A6Q5VVP1 1343 aa16.64■□□□□ 0.25
RPAIN-214ENST00000574003 HRCP23327 699 aa16.63■□□□□ 0.25
RPAIN-214ENST00000574003 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
RPAIN-214ENST00000574003 KNDC1Q76NI1 1749 aa16.62■□□□□ 0.25
RPAIN-214ENST00000574003 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
RPAIN-214ENST00000574003 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
RPAIN-214ENST00000574003 XPCQ01831 940 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-214ENST00000574003 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
RPAIN-214ENST00000574003 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
RPAIN-214ENST00000574003 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
RPAIN-214ENST00000574003 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
RPAIN-214ENST00000574003 PRAM1Q96QH2 718 aa16.58■□□□□ 0.24
RPAIN-214ENST00000574003 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-214ENST00000574003 FOXO3O43524 673 aa16.57■□□□□ 0.24
RPAIN-214ENST00000574003 LAMC1P11047 1609 aa16.56■□□□□ 0.24
RPAIN-214ENST00000574003 TRAK1Q9UPV9 953 aa16.56■□□□□ 0.24
RPAIN-214ENST00000574003 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
RPAIN-214ENST00000574003 ADGRB1O14514 1584 aa16.55■□□□□ 0.24
RPAIN-214ENST00000574003 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
RPAIN-214ENST00000574003 RGPD8O14715 1765 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-214ENST00000574003 AFF2P51816 1311 aa16.54■□□□□ 0.24
RPAIN-214ENST00000574003 SIRT1Q96EB6 747 aa16.54■□□□□ 0.24
RPAIN-214ENST00000574003 C8orf37Q96NL8 207 aa16.54■□□□□ 0.24
RPAIN-214ENST00000574003 POGKQ9P215 609 aa16.54■□□□□ 0.24
RPAIN-214ENST00000574003 HIRIP3Q9BW71 556 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-214ENST00000574003 PXDNQ92626 1479 aa16.53■□□□□ 0.24
RPAIN-214ENST00000574003 NPHP3Q7Z494 1330 aa16.51■□□□□ 0.23
RPAIN-214ENST00000574003 MINK1Q8N4C8 1332 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-214ENST00000574003 ZNF772Q68DY9 489 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-214ENST00000574003 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
RPAIN-214ENST00000574003 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
RPAIN-214ENST00000574003 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
RPAIN-214ENST00000574003 NGLY1Q96IV0 654 aa16.48■□□□□ 0.23
RPAIN-214ENST00000574003 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
RPAIN-214ENST00000574003 KRT28Q7Z3Y7 464 aa16.47■□□□□ 0.23
RPAIN-214ENST00000574003 PMFBP1Q8TBY8 1022 aa16.47■□□□□ 0.23
RPAIN-214ENST00000574003 USP32Q8NFA0 1604 aa16.47■□□□□ 0.23
RPAIN-214ENST00000574003 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.23
RPAIN-214ENST00000574003 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
RPAIN-214ENST00000574003 COL22A1Q8NFW1 1626 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-214ENST00000574003 RXRBP28702 533 aa16.45■□□□□ 0.22
RPAIN-214ENST00000574003 QTRT2Q9H974 415 aaKnown RBP16.45■□□□□ 0.22
RPAIN-214ENST00000574003 KIF1AQ12756 1690 aa16.44■□□□□ 0.22
RPAIN-214ENST00000574003 STAC3Q96MF2 364 aa16.44■□□□□ 0.22
RPAIN-214ENST00000574003 ARHGEF28Q8N1W1 1705 aaKnown RBP16.44■□□□□ 0.22
RPAIN-214ENST00000574003 SPATA31A3Q5VYP0 1347 aa16.44■□□□□ 0.22
RPAIN-214ENST00000574003 ADGRB2O60241 1585 aa16.43■□□□□ 0.22
RPAIN-214ENST00000574003 NEUROD1Q13562 356 aa16.43■□□□□ 0.22
RPAIN-214ENST00000574003 CABLES1Q8TDN4 633 aa16.43■□□□□ 0.22
RPAIN-214ENST00000574003 WASLO00401 505 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-214ENST00000574003 L3MBTL2Q969R5 705 aa16.42■□□□□ 0.22
RPAIN-214ENST00000574003 USP21Q9UK80 565 aa16.42■□□□□ 0.22
RPAIN-214ENST00000574003 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
RPAIN-214ENST00000574003 ANKARQ7Z5J8 1434 aa16.4■□□□□ 0.22
RPAIN-214ENST00000574003 PSME1Q06323 249 aa16.4■□□□□ 0.22
RPAIN-214ENST00000574003 RGS12O14924 1447 aa16.39■□□□□ 0.21
RPAIN-214ENST00000574003 TNS3Q68CZ2 1445 aa16.38■□□□□ 0.21
RPAIN-214ENST00000574003 RBM6P78332 1123 aaKnown RBP16.38■□□□□ 0.21
RPAIN-214ENST00000574003 FNBP4Q8N3X1 1017 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-214ENST00000574003 TULP4Q9NRJ4 1543 aa16.38■□□□□ 0.21
RPAIN-214ENST00000574003 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
RPAIN-214ENST00000574003 MARF1Q9Y4F3 1742 aaKnown RBP16.37■□□□□ 0.21
RPAIN-214ENST00000574003 CDK19Q9BWU1 502 aa16.37■□□□□ 0.21
RPAIN-214ENST00000574003 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
RPAIN-214ENST00000574003 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
RPAIN-214ENST00000574003 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
RPAIN-214ENST00000574003 UPF1Q92900 1129 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPAIN-214ENST00000574003 TRPC5Q9UL62 973 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-214ENST00000574003 ATRNO75882 1429 aa16.35■□□□□ 0.21
RPAIN-214ENST00000574003 ATP7BP35670 1465 aa16.35■□□□□ 0.21
RPAIN-214ENST00000574003 TRPM3Q9HCF6 1732 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-214ENST00000574003 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-214ENST00000574003 NGDNQ8NEJ9 315 aaKnown RBP16.34■□□□□ 0.21
RPAIN-214ENST00000574003 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-214ENST00000574003 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
RPAIN-214ENST00000574003 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
RPAIN-214ENST00000574003 ABCA3Q99758 1704 aa16.32■□□□□ 0.2
RPAIN-214ENST00000574003 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-214ENST00000574003 SLIT2O94813 1529 aa16.3■□□□□ 0.2
RPAIN-214ENST00000574003 ARHGEF10O15013 1369 aa16.3■□□□□ 0.2
RPAIN-214ENST00000574003 CENPJQ9HC77 1338 aaPredicted RBP16.3■□□□□ 0.2
RPAIN-214ENST00000574003 NBPF8Q3BBV2 869 aa16.3■□□□□ 0.2
RPAIN-214ENST00000574003 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
RPAIN-214ENST00000574003 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
RPAIN-214ENST00000574003 FAM83GA6ND36 823 aa16.29■□□□□ 0.2
RPAIN-214ENST00000574003 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
RPAIN-214ENST00000574003 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
RPAIN-214ENST00000574003 TRPM1Q7Z4N2 1603 aa16.29■□□□□ 0.2
RPAIN-214ENST00000574003 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-214ENST00000574003 GJD4Q96KN9 370 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-214ENST00000574003 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
RPAIN-214ENST00000574003 QRICH2Q9H0J4 1663 aa16.27■□□□□ 0.2
RPAIN-214ENST00000574003 ACEP12821 1306 aa16.27■□□□□ 0.2
RPAIN-214ENST00000574003 SRPK2P78362 688 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms