RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-216	ENST00000573795	KNDC1	Q76NI1	1749 aa		32.92	■■■□□ 2.86
SNF8-216	ENST00000573795	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.91	■■■□□ 2.86
SNF8-216	ENST00000573795	RGL3	Q3MIN7	710 aa		32.91	■■■□□ 2.86
SNF8-216	ENST00000573795	ANKRD30B	Q9BXX2	1392 aa		32.9	■■■□□ 2.86
SNF8-216	ENST00000573795	PIK3C2G	O75747	1445 aa		32.89	■■■□□ 2.86
SNF8-216	ENST00000573795	RGS12	O14924	1447 aa		32.88	■■■□□ 2.85
SNF8-216	ENST00000573795	LRPPRC	P42704	1394 aa	Known RBP	32.87	■■■□□ 2.85
SNF8-216	ENST00000573795	PXDN	Q92626	1479 aa		32.86	■■■□□ 2.85
SNF8-216	ENST00000573795	ADAMTS2	O95450	1211 aa		32.86	■■■□□ 2.85
SNF8-216	ENST00000573795	QTRT2	Q9H974	415 aa	Known RBP	32.85	■■■□□ 2.85
SNF8-216	ENST00000573795	WAPL	Q7Z5K2	1190 aa		32.84	■■■□□ 2.85
SNF8-216	ENST00000573795	ABCC11	Q96J66	1382 aa		32.83	■■■□□ 2.85
SNF8-216	ENST00000573795	PLEKHH1	Q9ULM0	1364 aa		32.83	■■■□□ 2.85
SNF8-216	ENST00000573795	STK26	Q9P289	416 aa		32.83	■■■□□ 2.85
SNF8-216	ENST00000573795	MYOM2	P54296	1465 aa		32.82	■■■□□ 2.84
SNF8-216	ENST00000573795	RBM6	P78332	1123 aa	Known RBP	32.82	■■■□□ 2.84
SNF8-216	ENST00000573795	TMEM132E	Q6IEE7	984 aa		32.82	■■■□□ 2.84
SNF8-216	ENST00000573795	NGLY1	Q96IV0	654 aa		32.81	■■■□□ 2.84
SNF8-216	ENST00000573795	FMN2	Q9NZ56	1722 aa		32.8	■■■□□ 2.84
SNF8-216	ENST00000573795	ESCO1	Q5FWF5	840 aa		32.8	■■■□□ 2.84
SNF8-216	ENST00000573795	NPHP3	Q7Z494	1330 aa		32.79	■■■□□ 2.84
SNF8-216	ENST00000573795	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.78	■■■□□ 2.84
SNF8-216	ENST00000573795	NRXN1	Q9ULB1	1477 aa		32.77	■■■□□ 2.84
SNF8-216	ENST00000573795	MARF1	Q9Y4F3	1742 aa	Known RBP	32.76	■■■□□ 2.83
SNF8-216	ENST00000573795	NUTM2F	A1L443	756 aa		32.73	■■■□□ 2.83
SNF8-216	ENST00000573795	FOXO3	O43524	673 aa		32.73	■■■□□ 2.83
SNF8-216	ENST00000573795	XPC	Q01831	940 aa	Predicted RBP	32.73	■■■□□ 2.83
SNF8-216	ENST00000573795	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.73	■■■□□ 2.83
SNF8-216	ENST00000573795	USP21	Q9UK80	565 aa		32.72	■■■□□ 2.83
SNF8-216	ENST00000573795	ATRN	O75882	1429 aa		32.7	■■■□□ 2.83
SNF8-216	ENST00000573795	KIF1A	Q12756	1690 aa		32.7	■■■□□ 2.83
SNF8-216	ENST00000573795	C14orf93	Q9H972	538 aa	Known RBP	32.69	■■■□□ 2.82
SNF8-216	ENST00000573795	RGPD8	O14715	1765 aa	Predicted RBP	32.68	■■■□□ 2.82
SNF8-216	ENST00000573795	TRPC5	Q9UL62	973 aa	Predicted RBP	32.67	■■■□□ 2.82
SNF8-216	ENST00000573795	SIRT1	Q96EB6	747 aa		32.66	■■■□□ 2.82
SNF8-216	ENST00000573795	ACIN1	Q9UKV3	1341 aa	Known RBP	32.66	■■■□□ 2.82
SNF8-216	ENST00000573795	BCL9L	Q86UU0	1499 aa		32.66	■■■□□ 2.82
SNF8-216	ENST00000573795	CFAP70	Q5T0N1	1121 aa		32.64	■■■□□ 2.82
SNF8-216	ENST00000573795	RAB3GAP2	Q9H2M9	1393 aa		32.64	■■■□□ 2.82
SNF8-216	ENST00000573795	SPATA31A3	Q5VYP0	1347 aa		32.6	■■■□□ 2.81
SNF8-216	ENST00000573795	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.6	■■■□□ 2.81
SNF8-216	ENST00000573795	DHX57	Q6P158	1386 aa	Known RBP	32.59	■■■□□ 2.81
SNF8-216	ENST00000573795	EP400	Q96L91	3159 aa		32.58	■■■□□ 2.81
SNF8-216	ENST00000573795	DLC1	Q96QB1	1528 aa		32.57	■■■□□ 2.8
SNF8-216	ENST00000573795	ADGRB1	O14514	1584 aa		32.57	■■■□□ 2.8
SNF8-216	ENST00000573795	ATAD2	Q6PL18	1390 aa		32.56	■■■□□ 2.8
SNF8-216	ENST00000573795	USP32	Q8NFA0	1604 aa		32.55	■■■□□ 2.8
SNF8-216	ENST00000573795	SLIT2	O94813	1529 aa		32.53	■■■□□ 2.8
SNF8-216	ENST00000573795	KRT28	Q7Z3Y7	464 aa		32.53	■■■□□ 2.8
SNF8-216	ENST00000573795	PRAM1	Q96QH2	718 aa		32.53	■■■□□ 2.8
SNF8-216	ENST00000573795	ADGRB2	O60241	1585 aa		32.53	■■■□□ 2.8
SNF8-216	ENST00000573795	TNS3	Q68CZ2	1445 aa		32.51	■■■□□ 2.8
SNF8-216	ENST00000573795	PHF8	Q9UPP1	1060 aa		32.51	■■■□□ 2.79
SNF8-216	ENST00000573795	ABCA3	Q99758	1704 aa		32.51	■■■□□ 2.79
SNF8-216	ENST00000573795	GLI3	P10071	1580 aa		32.5	■■■□□ 2.79
SNF8-216	ENST00000573795	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
SNF8-216	ENST00000573795	GJD4	Q96KN9	370 aa	Predicted RBP	32.47	■■■□□ 2.79
SNF8-216	ENST00000573795	ANKAR	Q7Z5J8	1434 aa		32.45	■■■□□ 2.79
SNF8-216	ENST00000573795	RALGAPB	Q86X10	1494 aa		32.45	■■■□□ 2.79
SNF8-216	ENST00000573795	SBNO1	A3KN83	1393 aa		32.45	■■■□□ 2.78
SNF8-216	ENST00000573795	UNC5CL	Q8IV45	518 aa		32.44	■■■□□ 2.78
SNF8-216	ENST00000573795	PLCH1	Q4KWH8	1693 aa		32.43	■■■□□ 2.78
SNF8-216	ENST00000573795	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.42	■■■□□ 2.78
SNF8-216	ENST00000573795	CABLES1	Q8TDN4	633 aa		32.41	■■■□□ 2.78
SNF8-216	ENST00000573795	POGK	Q9P215	609 aa		32.41	■■■□□ 2.78
SNF8-216	ENST00000573795	PSME1	Q06323	249 aa		32.4	■■■□□ 2.78
SNF8-216	ENST00000573795	NWD2	Q9ULI1	1742 aa		32.4	■■■□□ 2.78
SNF8-216	ENST00000573795	SRCAP	Q6ZRS2	3230 aa		32.39	■■■□□ 2.78
SNF8-216	ENST00000573795	BRWD3	Q6RI45	1802 aa		32.38	■■■□□ 2.77
SNF8-216	ENST00000573795	TRAK1	Q9UPV9	953 aa		32.38	■■■□□ 2.77
SNF8-216	ENST00000573795	PMFBP1	Q8TBY8	1022 aa		32.37	■■■□□ 2.77
SNF8-216	ENST00000573795	ARHGEF10	O15013	1369 aa		32.36	■■■□□ 2.77
SNF8-216	ENST00000573795	ALS2	Q96Q42	1657 aa		32.36	■■■□□ 2.77
SNF8-216	ENST00000573795	PRR36	Q9H6K5	1346 aa		32.35	■■■□□ 2.77
SNF8-216	ENST00000573795	DCAF11	Q8TEB1	546 aa		32.35	■■■□□ 2.77
SNF8-216	ENST00000573795	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.35	■■■□□ 2.77
SNF8-216	ENST00000573795	KDM2A	Q9Y2K7	1162 aa		32.35	■■■□□ 2.77
SNF8-216	ENST00000573795	TULP4	Q9NRJ4	1543 aa		32.35	■■■□□ 2.77
SNF8-216	ENST00000573795	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.33	■■■□□ 2.77
SNF8-216	ENST00000573795	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.32	■■■□□ 2.76
SNF8-216	ENST00000573795	PLEKHG5	O94827	1062 aa		32.32	■■■□□ 2.76
SNF8-216	ENST00000573795	HAP1	P54257	671 aa	Predicted RBP	32.31	■■■□□ 2.76
SNF8-216	ENST00000573795	LMOD2	Q6P5Q4	547 aa		32.3	■■■□□ 2.76
SNF8-216	ENST00000573795	NRAP	Q86VF7	1730 aa		32.3	■■■□□ 2.76
SNF8-216	ENST00000573795	HRC	P23327	699 aa		32.29	■■■□□ 2.76
SNF8-216	ENST00000573795	VPS72	Q15906	364 aa		32.29	■■■□□ 2.76
SNF8-216	ENST00000573795	CRYBG1	Q9Y4K1	1723 aa		32.29	■■■□□ 2.76
SNF8-216	ENST00000573795	CCDC125	Q86Z20	511 aa		32.27	■■■□□ 2.76
SNF8-216	ENST00000573795	EIF3A	Q14152	1382 aa	Known RBP	32.27	■■■□□ 2.76
SNF8-216	ENST00000573795	WASL	O00401	505 aa	Predicted RBP	32.26	■■■□□ 2.75
SNF8-216	ENST00000573795	STAC3	Q96MF2	364 aa		32.26	■■■□□ 2.75
SNF8-216	ENST00000573795	FAM83G	A6ND36	823 aa		32.25	■■■□□ 2.75
SNF8-216	ENST00000573795	SEPT12	Q8IYM1	358 aa		32.23	■■■□□ 2.75
SNF8-216	ENST00000573795	ATP7B	P35670	1465 aa		32.22	■■■□□ 2.75
SNF8-216	ENST00000573795	GPRASP1	Q5JY77	1395 aa		32.21	■■■□□ 2.75
SNF8-216	ENST00000573795	ITSN1	Q15811	1721 aa		32.21	■■■□□ 2.75
SNF8-216	ENST00000573795	BLM	P54132	1417 aa	Predicted RBP	32.21	■■■□□ 2.75
SNF8-216	ENST00000573795	ONECUT3	O60422	494 aa	Predicted RBP	32.21	■■■□□ 2.75
SNF8-216	ENST00000573795	COL14A1	Q05707	1796 aa	Known RBP	32.21	■■■□□ 2.75
SNF8-216	ENST00000573795	ZRANB1	Q9UGI0	708 aa		32.16	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms