RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 STK26Q9P289 416 aa18.47■□□□□ 0.55
POLR2A-202ENST00000573603 SOS2Q07890 1332 aaPredicted RBP18.47■□□□□ 0.55
POLR2A-202ENST00000573603 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
POLR2A-202ENST00000573603 COL22A1Q8NFW1 1626 aaPredicted RBP18.45■□□□□ 0.54
POLR2A-202ENST00000573603 RGS12O14924 1447 aa18.44■□□□□ 0.54
POLR2A-202ENST00000573603 TECPR2O15040 1411 aa18.44■□□□□ 0.54
POLR2A-202ENST00000573603 PIK3C2GO75747 1445 aa18.44■□□□□ 0.54
POLR2A-202ENST00000573603 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
POLR2A-202ENST00000573603 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
POLR2A-202ENST00000573603 NUTM2FA1L443 756 aa18.42■□□□□ 0.54
POLR2A-202ENST00000573603 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
POLR2A-202ENST00000573603 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
POLR2A-202ENST00000573603 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
POLR2A-202ENST00000573603 FMN2Q9NZ56 1722 aa18.42■□□□□ 0.54
POLR2A-202ENST00000573603 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
POLR2A-202ENST00000573603 PXDNQ92626 1479 aa18.41■□□□□ 0.54
POLR2A-202ENST00000573603 TMEM132EQ6IEE7 984 aa18.41■□□□□ 0.54
POLR2A-202ENST00000573603 QTRT2Q9H974 415 aaKnown RBP18.41■□□□□ 0.54
POLR2A-202ENST00000573603 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
POLR2A-202ENST00000573603 NPHP3Q7Z494 1330 aa18.4■□□□□ 0.54
POLR2A-202ENST00000573603 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
POLR2A-202ENST00000573603 RBM6P78332 1123 aaKnown RBP18.39■□□□□ 0.53
POLR2A-202ENST00000573603 MARF1Q9Y4F3 1742 aaKnown RBP18.39■□□□□ 0.53
POLR2A-202ENST00000573603 ABCC11Q96J66 1382 aa18.38■□□□□ 0.53
POLR2A-202ENST00000573603 MYOM2P54296 1465 aa18.38■□□□□ 0.53
POLR2A-202ENST00000573603 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
POLR2A-202ENST00000573603 FOXO3O43524 673 aa18.37■□□□□ 0.53
POLR2A-202ENST00000573603 USP21Q9UK80 565 aa18.37■□□□□ 0.53
POLR2A-202ENST00000573603 RGPD8O14715 1765 aaPredicted RBP18.35■□□□□ 0.53
POLR2A-202ENST00000573603 NRXN1Q9ULB1 1477 aa18.34■□□□□ 0.53
POLR2A-202ENST00000573603 RAB3GAP2Q9H2M9 1393 aa18.34■□□□□ 0.53
POLR2A-202ENST00000573603 ATRNO75882 1429 aa18.32■□□□□ 0.52
POLR2A-202ENST00000573603 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
POLR2A-202ENST00000573603 CFAP70Q5T0N1 1121 aa18.31■□□□□ 0.52
POLR2A-202ENST00000573603 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
POLR2A-202ENST00000573603 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
POLR2A-202ENST00000573603 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
POLR2A-202ENST00000573603 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
POLR2A-202ENST00000573603 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
POLR2A-202ENST00000573603 BCL9LQ86UU0 1499 aa18.28■□□□□ 0.52
POLR2A-202ENST00000573603 USP32Q8NFA0 1604 aa18.28■□□□□ 0.52
POLR2A-202ENST00000573603 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.28■□□□□ 0.52
POLR2A-202ENST00000573603 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
POLR2A-202ENST00000573603 PRAM1Q96QH2 718 aa18.27■□□□□ 0.52
POLR2A-202ENST00000573603 SPATA31A3Q5VYP0 1347 aa18.26■□□□□ 0.51
POLR2A-202ENST00000573603 DLC1Q96QB1 1528 aa18.26■□□□□ 0.51
POLR2A-202ENST00000573603 ABCA3Q99758 1704 aa18.26■□□□□ 0.51
POLR2A-202ENST00000573603 ADGRB1O14514 1584 aa18.25■□□□□ 0.51
POLR2A-202ENST00000573603 TNS3Q68CZ2 1445 aa18.25■□□□□ 0.51
POLR2A-202ENST00000573603 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
POLR2A-202ENST00000573603 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
POLR2A-202ENST00000573603 SIRT1Q96EB6 747 aa18.25■□□□□ 0.51
POLR2A-202ENST00000573603 PHF8Q9UPP1 1060 aa18.25■□□□□ 0.51
POLR2A-202ENST00000573603 ADGRB2O60241 1585 aa18.25■□□□□ 0.51
POLR2A-202ENST00000573603 PLCH1Q4KWH8 1693 aa18.23■□□□□ 0.51
POLR2A-202ENST00000573603 POGKQ9P215 609 aa18.23■□□□□ 0.51
POLR2A-202ENST00000573603 HAP1P54257 671 aaPredicted RBP18.22■□□□□ 0.51
POLR2A-202ENST00000573603 GLI3P10071 1580 aa18.21■□□□□ 0.51
POLR2A-202ENST00000573603 SLIT2O94813 1529 aa18.21■□□□□ 0.51
POLR2A-202ENST00000573603 LMOD2Q6P5Q4 547 aa18.2■□□□□ 0.5
POLR2A-202ENST00000573603 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
POLR2A-202ENST00000573603 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
POLR2A-202ENST00000573603 KDM2AQ9Y2K7 1162 aa18.2■□□□□ 0.5
POLR2A-202ENST00000573603 ANKARQ7Z5J8 1434 aa18.2■□□□□ 0.5
POLR2A-202ENST00000573603 RALGAPBQ86X10 1494 aa18.2■□□□□ 0.5
POLR2A-202ENST00000573603 PSME1Q06323 249 aa18.19■□□□□ 0.5
POLR2A-202ENST00000573603 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
POLR2A-202ENST00000573603 CABLES1Q8TDN4 633 aa18.19■□□□□ 0.5
POLR2A-202ENST00000573603 HIRIP3Q9BW71 556 aaPredicted RBP18.19■□□□□ 0.5
POLR2A-202ENST00000573603 SBNO1A3KN83 1393 aa18.18■□□□□ 0.5
POLR2A-202ENST00000573603 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
POLR2A-202ENST00000573603 UNC5CLQ8IV45 518 aa18.18■□□□□ 0.5
POLR2A-202ENST00000573603 DCAF11Q8TEB1 546 aa18.18■□□□□ 0.5
POLR2A-202ENST00000573603 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
POLR2A-202ENST00000573603 NWD2Q9ULI1 1742 aa18.18■□□□□ 0.5
POLR2A-202ENST00000573603 ARHGEF28Q8N1W1 1705 aaKnown RBP18.17■□□□□ 0.5
POLR2A-202ENST00000573603 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
POLR2A-202ENST00000573603 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
POLR2A-202ENST00000573603 TULP4Q9NRJ4 1543 aa18.16■□□□□ 0.5
POLR2A-202ENST00000573603 EP400Q96L91 3159 aa18.16■□□□□ 0.5
POLR2A-202ENST00000573603 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
POLR2A-202ENST00000573603 EIF3AQ14152 1382 aaKnown RBP18.14■□□□□ 0.49
POLR2A-202ENST00000573603 PRR36Q9H6K5 1346 aa18.13■□□□□ 0.49
POLR2A-202ENST00000573603 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
POLR2A-202ENST00000573603 CCDC9Q9Y3X0 531 aaKnown RBP18.12■□□□□ 0.49
POLR2A-202ENST00000573603 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
POLR2A-202ENST00000573603 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
POLR2A-202ENST00000573603 CRYBG1Q9Y4K1 1723 aa18.09■□□□□ 0.49
POLR2A-202ENST00000573603 WASLO00401 505 aaPredicted RBP18.09■□□□□ 0.49
POLR2A-202ENST00000573603 VPS72Q15906 364 aa18.09■□□□□ 0.49
POLR2A-202ENST00000573603 COL14A1Q05707 1796 aaKnown RBP18.08■□□□□ 0.48
POLR2A-202ENST00000573603 ATP7BP35670 1465 aa18.07■□□□□ 0.48
POLR2A-202ENST00000573603 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
POLR2A-202ENST00000573603 CCDC125Q86Z20 511 aa18.07■□□□□ 0.48
POLR2A-202ENST00000573603 SEPT12Q8IYM1 358 aa18.07■□□□□ 0.48
POLR2A-202ENST00000573603 BLMP54132 1417 aaPredicted RBP18.06■□□□□ 0.48
POLR2A-202ENST00000573603 A0A0G2JS52 829 aa18.06■□□□□ 0.48
POLR2A-202ENST00000573603 MYT1Q01538 1121 aa18.06■□□□□ 0.48
POLR2A-202ENST00000573603 NGDNQ8NEJ9 315 aaKnown RBP18.06■□□□□ 0.48
POLR2A-202ENST00000573603 PAK3O75914 559 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms