RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
TVP23A-207ENST00000573360 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
TVP23A-207ENST00000573360 MYO5BQ9ULV0 1848 aa18.56■□□□□ 0.56
TVP23A-207ENST00000573360 HDGFL2Q7Z4V5 671 aaPredicted RBP18.56■□□□□ 0.56
TVP23A-207ENST00000573360 ANKLE2Q86XL3 938 aa18.55■□□□□ 0.56
TVP23A-207ENST00000573360 ADAMTS8Q9UP79 889 aa18.55■□□□□ 0.56
TVP23A-207ENST00000573360 TERF2IPQ9NYB0 399 aa18.54■□□□□ 0.56
TVP23A-207ENST00000573360 U2SURPO15042 1029 aaKnown RBP18.54■□□□□ 0.56
TVP23A-207ENST00000573360 ZBTB7CA1YPR0 619 aa18.54■□□□□ 0.56
TVP23A-207ENST00000573360 NUTM2GQ5VZR2 741 aa18.54■□□□□ 0.56
TVP23A-207ENST00000573360 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
TVP23A-207ENST00000573360 KCNA6P17658 529 aa18.52■□□□□ 0.56
TVP23A-207ENST00000573360 NUDT16Q96DE0 195 aaKnown RBP18.52■□□□□ 0.55
TVP23A-207ENST00000573360 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.55
TVP23A-207ENST00000573360 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.55
TVP23A-207ENST00000573360 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.55
TVP23A-207ENST00000573360 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
TVP23A-207ENST00000573360 MTHFSP49914 203 aa18.51■□□□□ 0.55
TVP23A-207ENST00000573360 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
TVP23A-207ENST00000573360 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
TVP23A-207ENST00000573360 WASLO00401 505 aaPredicted RBP18.5■□□□□ 0.55
TVP23A-207ENST00000573360 NGDNQ8NEJ9 315 aaKnown RBP18.5■□□□□ 0.55
TVP23A-207ENST00000573360 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
TVP23A-207ENST00000573360 NRXN1Q9ULB1 1477 aa18.48■□□□□ 0.55
TVP23A-207ENST00000573360 PPLO60437 1756 aa18.47■□□□□ 0.55
TVP23A-207ENST00000573360 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
TVP23A-207ENST00000573360 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
TVP23A-207ENST00000573360 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
TVP23A-207ENST00000573360 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
TVP23A-207ENST00000573360 NME9Q86XW9 330 aa18.46■□□□□ 0.55
TVP23A-207ENST00000573360 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
TVP23A-207ENST00000573360 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
TVP23A-207ENST00000573360 XPCQ01831 940 aaPredicted RBP18.46■□□□□ 0.55
TVP23A-207ENST00000573360 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
TVP23A-207ENST00000573360 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
TVP23A-207ENST00000573360 REREQ9P2R6 1566 aa18.46■□□□□ 0.55
TVP23A-207ENST00000573360 BRD4O60885 1362 aaPredicted RBP18.45■□□□□ 0.54
TVP23A-207ENST00000573360 A0A1W2PP64 1363 aa18.45■□□□□ 0.54
TVP23A-207ENST00000573360 LRPPRCP42704 1394 aaKnown RBP18.45■□□□□ 0.54
TVP23A-207ENST00000573360 CCDC61Q9Y6R9 512 aa18.44■□□□□ 0.54
TVP23A-207ENST00000573360 APAF1O14727 1248 aa18.44■□□□□ 0.54
TVP23A-207ENST00000573360 ZFYVE9O95405 1425 aa18.42■□□□□ 0.54
TVP23A-207ENST00000573360 FYB1O15117 783 aa18.42■□□□□ 0.54
TVP23A-207ENST00000573360 RRS1Q15050 365 aaKnown RBP18.42■□□□□ 0.54
TVP23A-207ENST00000573360 IQGAP1P46940 1657 aa18.42■□□□□ 0.54
TVP23A-207ENST00000573360 PTPRMP28827 1452 aa18.41■□□□□ 0.54
TVP23A-207ENST00000573360 ASXL1Q8IXJ9 1541 aa18.41■□□□□ 0.54
TVP23A-207ENST00000573360 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
TVP23A-207ENST00000573360 ATAD2Q6PL18 1390 aa18.4■□□□□ 0.54
TVP23A-207ENST00000573360 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
TVP23A-207ENST00000573360 ABCC11Q96J66 1382 aa18.4■□□□□ 0.54
TVP23A-207ENST00000573360 ZBED9Q6R2W3 1325 aa18.39■□□□□ 0.53
TVP23A-207ENST00000573360 PROSER2Q86WR7 435 aaPredicted RBP18.39■□□□□ 0.53
TVP23A-207ENST00000573360 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
TVP23A-207ENST00000573360 RIMS1Q86UR5 1692 aaKnown RBP18.38■□□□□ 0.53
TVP23A-207ENST00000573360 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
TVP23A-207ENST00000573360 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
TVP23A-207ENST00000573360 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
TVP23A-207ENST00000573360 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
TVP23A-207ENST00000573360 FER1L4A9Z1Z3 1794 aa18.37■□□□□ 0.53
TVP23A-207ENST00000573360 ACEP12821 1306 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 TULP4Q9NRJ4 1543 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 ANKRD36BQ8N2N9 1353 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 PPIP5K1Q6PFW1 1433 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 HMOX1P09601 288 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 EMILIN1Q9Y6C2 1016 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 ADAMTS13Q76LX8 1427 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 COG3Q96JB2 828 aa18.36■□□□□ 0.53
TVP23A-207ENST00000573360 QRICH2Q9H0J4 1663 aa18.35■□□□□ 0.53
TVP23A-207ENST00000573360 LAMC1P11047 1609 aa18.35■□□□□ 0.53
TVP23A-207ENST00000573360 KDM5AP29375 1690 aaKnown RBP18.35■□□□□ 0.53
TVP23A-207ENST00000573360 LTV1Q96GA3 475 aaPredicted RBP18.34■□□□□ 0.53
TVP23A-207ENST00000573360 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
TVP23A-207ENST00000573360 C3P01024 1663 aa18.33■□□□□ 0.52
TVP23A-207ENST00000573360 FOXO3O43524 673 aa18.32■□□□□ 0.52
TVP23A-207ENST00000573360 PTPRUQ92729 1446 aa18.32■□□□□ 0.52
TVP23A-207ENST00000573360 NEURL4Q96JN8 1562 aa18.32■□□□□ 0.52
TVP23A-207ENST00000573360 POLR1AO95602 1720 aaPredicted RBP18.31■□□□□ 0.52
TVP23A-207ENST00000573360 NLRP6P59044 892 aa18.3■□□□□ 0.52
TVP23A-207ENST00000573360 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
TVP23A-207ENST00000573360 MSH5O43196 834 aa18.3■□□□□ 0.52
TVP23A-207ENST00000573360 PLIN1O60240 522 aa18.3■□□□□ 0.52
TVP23A-207ENST00000573360 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
TVP23A-207ENST00000573360 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
TVP23A-207ENST00000573360 CCDC136Q96JN2 1154 aa18.29■□□□□ 0.52
TVP23A-207ENST00000573360 PSME1Q06323 249 aa18.29■□□□□ 0.52
TVP23A-207ENST00000573360 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
TVP23A-207ENST00000573360 ABTB2Q8N961 1025 aa18.28■□□□□ 0.52
TVP23A-207ENST00000573360 ORAI2Q96SN7 254 aa18.28■□□□□ 0.52
TVP23A-207ENST00000573360 DIAPH1O60610 1272 aaKnown RBP18.26■□□□□ 0.51
TVP23A-207ENST00000573360 TCP11L2Q8N4U5 519 aa18.26■□□□□ 0.51
TVP23A-207ENST00000573360 MAPK8IP3Q9UPT6 1336 aa18.26■□□□□ 0.51
TVP23A-207ENST00000573360 KDM4FA0A1W2PPD8 638 aa18.26■□□□□ 0.51
TVP23A-207ENST00000573360 NEFMP07197 916 aa18.26■□□□□ 0.51
TVP23A-207ENST00000573360 ARHGEF28Q8N1W1 1705 aaKnown RBP18.26■□□□□ 0.51
TVP23A-207ENST00000573360 UBR1Q8IWV7 1749 aa18.25■□□□□ 0.51
TVP23A-207ENST00000573360 AMPHP49418 695 aa18.23■□□□□ 0.51
TVP23A-207ENST00000573360 POLKQ9UBT6 870 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms