RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 RALGAPBQ86X10 1494 aa24.64■■□□□ 1.53
LITAF-212ENST00000573332 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.63■■□□□ 1.53
LITAF-212ENST00000573332 POGKQ9P215 609 aa24.62■■□□□ 1.53
LITAF-212ENST00000573332 SLAIN2Q9P270 581 aa24.61■■□□□ 1.53
LITAF-212ENST00000573332 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
LITAF-212ENST00000573332 ILDR1Q86SU0 546 aaPredicted RBP24.58■■□□□ 1.53
LITAF-212ENST00000573332 PIP4K2BP78356 416 aa24.57■■□□□ 1.52
LITAF-212ENST00000573332 CDC42BPGQ6DT37 1551 aa24.57■■□□□ 1.52
LITAF-212ENST00000573332 ARHGEF28Q8N1W1 1705 aaKnown RBP24.56■■□□□ 1.52
LITAF-212ENST00000573332 MST1RQ04912 1400 aa24.56■■□□□ 1.52
LITAF-212ENST00000573332 CARD11Q9BXL7 1154 aa24.56■■□□□ 1.52
LITAF-212ENST00000573332 SAFB2Q14151 953 aaKnown RBP eCLIP24.55■■□□□ 1.52
LITAF-212ENST00000573332 CENPJQ9HC77 1338 aaPredicted RBP24.53■■□□□ 1.52
LITAF-212ENST00000573332 ADGRB2O60241 1585 aa24.52■■□□□ 1.52
LITAF-212ENST00000573332 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
LITAF-212ENST00000573332 EIF3AQ14152 1382 aaKnown RBP24.51■■□□□ 1.51
LITAF-212ENST00000573332 C1orf167Q5SNV9 1468 aa24.51■■□□□ 1.51
LITAF-212ENST00000573332 MINK1Q8N4C8 1332 aaPredicted RBP24.5■■□□□ 1.51
LITAF-212ENST00000573332 WASLO00401 505 aaPredicted RBP24.47■■□□□ 1.51
LITAF-212ENST00000573332 BRINP3Q76B58 766 aa24.47■■□□□ 1.51
LITAF-212ENST00000573332 HIRIP3Q9BW71 556 aaPredicted RBP24.46■■□□□ 1.51
LITAF-212ENST00000573332 SBNO2Q9Y2G9 1366 aa24.44■■□□□ 1.5
LITAF-212ENST00000573332 ROBO1Q9Y6N7 1651 aa24.44■■□□□ 1.5
LITAF-212ENST00000573332 FMN2Q9NZ56 1722 aa24.44■■□□□ 1.5
LITAF-212ENST00000573332 ANKARQ7Z5J8 1434 aa24.43■■□□□ 1.5
LITAF-212ENST00000573332 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
LITAF-212ENST00000573332 HSPA1LP34931 641 aa24.41■■□□□ 1.5
LITAF-212ENST00000573332 NUTM2FA1L443 756 aa24.4■■□□□ 1.5
LITAF-212ENST00000573332 CDK19Q9BWU1 502 aa24.4■■□□□ 1.5
LITAF-212ENST00000573332 ESCO1Q5FWF5 840 aa24.39■■□□□ 1.49
LITAF-212ENST00000573332 TULP4Q9NRJ4 1543 aa24.39■■□□□ 1.49
LITAF-212ENST00000573332 QRICH2Q9H0J4 1663 aa24.38■■□□□ 1.49
LITAF-212ENST00000573332 PRR36Q9H6K5 1346 aa24.37■■□□□ 1.49
LITAF-212ENST00000573332 USP47Q96K76 1375 aa24.37■■□□□ 1.49
LITAF-212ENST00000573332 AHDC1Q5TGY3 1603 aaPredicted RBP24.36■■□□□ 1.49
LITAF-212ENST00000573332 ST20-MTHFSA0A0A6YYL1 179 aa24.36■■□□□ 1.49
LITAF-212ENST00000573332 SLC24A1O60721 1099 aa24.36■■□□□ 1.49
LITAF-212ENST00000573332 EVC2Q86UK5 1308 aa24.35■■□□□ 1.49
LITAF-212ENST00000573332 NUDT16Q96DE0 195 aaKnown RBP24.34■■□□□ 1.49
LITAF-212ENST00000573332 TESK2Q96S53 571 aa24.34■■□□□ 1.49
LITAF-212ENST00000573332 USP32Q8NFA0 1604 aa24.34■■□□□ 1.49
LITAF-212ENST00000573332 ATP7BP35670 1465 aa24.33■■□□□ 1.49
LITAF-212ENST00000573332 PHF8Q9UPP1 1060 aa24.33■■□□□ 1.49
LITAF-212ENST00000573332 CCDC61Q9Y6R9 512 aa24.32■■□□□ 1.48
LITAF-212ENST00000573332 SRPK2P78362 688 aaKnown RBP24.31■■□□□ 1.48
LITAF-212ENST00000573332 NHSL1Q5SYE7 1610 aa24.31■■□□□ 1.48
LITAF-212ENST00000573332 NPHP3Q7Z494 1330 aa24.31■■□□□ 1.48
LITAF-212ENST00000573332 SOS2Q07890 1332 aaPredicted RBP24.3■■□□□ 1.48
LITAF-212ENST00000573332 FOXO3O43524 673 aa24.29■■□□□ 1.48
LITAF-212ENST00000573332 PUS7Q96PZ0 661 aaKnown RBP24.29■■□□□ 1.48
LITAF-212ENST00000573332 CABP2Q9NPB3 220 aa24.29■■□□□ 1.48
LITAF-212ENST00000573332 KIF1AQ12756 1690 aa24.28■■□□□ 1.48
LITAF-212ENST00000573332 DDX17Q92841 729 aaKnown RBP24.28■■□□□ 1.48
LITAF-212ENST00000573332 PLEKHG3A1L390 1219 aa24.27■■□□□ 1.48
LITAF-212ENST00000573332 EIF4G2P78344 907 aaKnown RBP eCLIP24.27■■□□□ 1.48
LITAF-212ENST00000573332 COL16A1Q07092 1604 aaPredicted RBP24.27■■□□□ 1.48
LITAF-212ENST00000573332 PHLPP1O60346 1717 aa24.27■■□□□ 1.48
LITAF-212ENST00000573332 PMFBP1Q8TBY8 1022 aa24.25■■□□□ 1.47
LITAF-212ENST00000573332 LRRC59Q96AG4 307 aaKnown RBP24.25■■□□□ 1.47
LITAF-212ENST00000573332 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
LITAF-212ENST00000573332 ATAD2Q6PL18 1390 aa24.24■■□□□ 1.47
LITAF-212ENST00000573332 PXDNQ92626 1479 aa24.23■■□□□ 1.47
LITAF-212ENST00000573332 POLR3AO14802 1390 aaPredicted RBP24.22■■□□□ 1.47
LITAF-212ENST00000573332 JCADQ9P266 1359 aa24.22■■□□□ 1.47
LITAF-212ENST00000573332 TMF1P82094 1093 aa24.22■■□□□ 1.47
LITAF-212ENST00000573332 KRT28Q7Z3Y7 464 aa24.22■■□□□ 1.47
LITAF-212ENST00000573332 ITSN1Q15811 1721 aa24.21■■□□□ 1.47
LITAF-212ENST00000573332 TOPAZ1Q8N9V7 1692 aa24.21■■□□□ 1.47
LITAF-212ENST00000573332 HSPA5P11021 654 aaKnown RBP24.21■■□□□ 1.47
LITAF-212ENST00000573332 PPIP5K1Q6PFW1 1433 aa24.2■■□□□ 1.46
LITAF-212ENST00000573332 PSME1Q06323 249 aa24.2■■□□□ 1.46
LITAF-212ENST00000573332 NGDNQ8NEJ9 315 aaKnown RBP24.2■■□□□ 1.46
LITAF-212ENST00000573332 CABP1Q9NZU7 370 aa24.19■■□□□ 1.46
LITAF-212ENST00000573332 ACEP12821 1306 aa24.18■■□□□ 1.46
LITAF-212ENST00000573332 SBNO1A3KN83 1393 aa24.17■■□□□ 1.46
LITAF-212ENST00000573332 XPCQ01831 940 aaPredicted RBP24.17■■□□□ 1.46
LITAF-212ENST00000573332 CDCA8Q53HL2 280 aa24.17■■□□□ 1.46
LITAF-212ENST00000573332 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
LITAF-212ENST00000573332 SPATA31A3Q5VYP0 1347 aa24.15■■□□□ 1.46
LITAF-212ENST00000573332 PNPLA6Q8IY17 1366 aa24.14■■□□□ 1.45
LITAF-212ENST00000573332 SPATA31A6Q5VVP1 1343 aa24.13■■□□□ 1.45
LITAF-212ENST00000573332 BRD4O60885 1362 aaPredicted RBP24.13■■□□□ 1.45
LITAF-212ENST00000573332 ZEB1P37275 1124 aaPredicted RBP24.12■■□□□ 1.45
LITAF-212ENST00000573332 ZNF692Q9BU19 519 aaPredicted RBP24.12■■□□□ 1.45
LITAF-212ENST00000573332 NINLQ9Y2I6 1382 aa24.12■■□□□ 1.45
LITAF-212ENST00000573332 SHPRHQ149N8 1683 aa24.11■■□□□ 1.45
LITAF-212ENST00000573332 CPSF1Q10570 1443 aaKnown RBP24.1■■□□□ 1.45
LITAF-212ENST00000573332 TNS3Q68CZ2 1445 aa24.1■■□□□ 1.45
LITAF-212ENST00000573332 SLC12A5Q9H2X9 1139 aa24.09■■□□□ 1.45
LITAF-212ENST00000573332 ARHGEF10O15013 1369 aa24.08■■□□□ 1.45
LITAF-212ENST00000573332 USP6P35125 1406 aa24.08■■□□□ 1.44
LITAF-212ENST00000573332 TRPM3Q9HCF6 1732 aaPredicted RBP24.07■■□□□ 1.44
LITAF-212ENST00000573332 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
LITAF-212ENST00000573332 SSH2Q76I76 1423 aa24.06■■□□□ 1.44
LITAF-212ENST00000573332 CD163L1Q9NR16 1453 aa24.06■■□□□ 1.44
LITAF-212ENST00000573332 TERF2IPQ9NYB0 399 aa24.05■■□□□ 1.44
LITAF-212ENST00000573332 COL22A1Q8NFW1 1626 aaPredicted RBP24.05■■□□□ 1.44
LITAF-212ENST00000573332 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
LITAF-212ENST00000573332 HDGFL2Q7Z4V5 671 aaPredicted RBP24.03■■□□□ 1.44
LITAF-212ENST00000573332 KTN1Q86UP2 1357 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms