RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 TECPR2O15040 1411 aa30.5■■■□□ 2.47
CHRNB1-204ENST00000572857 YTHDC2Q9H6S0 1430 aaKnown RBP30.5■■■□□ 2.47
CHRNB1-204ENST00000572857 PLEKHH1Q9ULM0 1364 aa30.5■■■□□ 2.47
CHRNB1-204ENST00000572857 NUTM2FA1L443 756 aa30.49■■■□□ 2.47
CHRNB1-204ENST00000572857 ESCO1Q5FWF5 840 aa30.49■■■□□ 2.47
CHRNB1-204ENST00000572857 KDM2AQ9Y2K7 1162 aa30.49■■■□□ 2.47
CHRNB1-204ENST00000572857 SHPRHQ149N8 1683 aa30.47■■■□□ 2.47
CHRNB1-204ENST00000572857 NHSL1Q5SYE7 1610 aa30.47■■■□□ 2.47
CHRNB1-204ENST00000572857 MYOM2P54296 1465 aa30.46■■■□□ 2.47
CHRNB1-204ENST00000572857 NRXN1Q9ULB1 1477 aa30.46■■■□□ 2.47
CHRNB1-204ENST00000572857 DHX57Q6P158 1386 aaKnown RBP30.46■■■□□ 2.47
CHRNB1-204ENST00000572857 DCAF11Q8TEB1 546 aa30.45■■■□□ 2.47
CHRNB1-204ENST00000572857 PNPLA6Q8IY17 1366 aa30.43■■■□□ 2.46
CHRNB1-204ENST00000572857 ZNF772Q68DY9 489 aaPredicted RBP30.43■■■□□ 2.46
CHRNB1-204ENST00000572857 SOS2Q07890 1332 aaPredicted RBP30.43■■■□□ 2.46
CHRNB1-204ENST00000572857 SIRT1Q96EB6 747 aa30.42■■■□□ 2.46
CHRNB1-204ENST00000572857 CDC42BPGQ6DT37 1551 aa30.41■■■□□ 2.46
CHRNB1-204ENST00000572857 SAFB2Q14151 953 aaKnown RBP eCLIP30.4■■■□□ 2.46
CHRNB1-204ENST00000572857 FOXO3O43524 673 aa30.39■■■□□ 2.46
CHRNB1-204ENST00000572857 PRAM1Q96QH2 718 aa30.39■■■□□ 2.46
CHRNB1-204ENST00000572857 XPCQ01831 940 aaPredicted RBP30.37■■■□□ 2.45
CHRNB1-204ENST00000572857 NPHP3Q7Z494 1330 aa30.37■■■□□ 2.45
CHRNB1-204ENST00000572857 C8orf37Q96NL8 207 aa30.36■■■□□ 2.45
CHRNB1-204ENST00000572857 POGKQ9P215 609 aa30.36■■■□□ 2.45
CHRNB1-204ENST00000572857 ADAMTS2O95450 1211 aa30.35■■■□□ 2.45
CHRNB1-204ENST00000572857 KNDC1Q76NI1 1749 aa30.35■■■□□ 2.45
CHRNB1-204ENST00000572857 AFF2P51816 1311 aa30.34■■■□□ 2.45
CHRNB1-204ENST00000572857 TRAK1Q9UPV9 953 aa30.33■■■□□ 2.45
CHRNB1-204ENST00000572857 STAC3Q96MF2 364 aa30.32■■■□□ 2.44
CHRNB1-204ENST00000572857 LAMC1P11047 1609 aa30.32■■■□□ 2.44
CHRNB1-204ENST00000572857 NGLY1Q96IV0 654 aa30.29■■■□□ 2.44
CHRNB1-204ENST00000572857 RXRBP28702 533 aa30.28■■■□□ 2.44
CHRNB1-204ENST00000572857 PXDNQ92626 1479 aa30.25■■■□□ 2.43
CHRNB1-204ENST00000572857 ADGRB1O14514 1584 aa30.24■■■□□ 2.43
CHRNB1-204ENST00000572857 HIRIP3Q9BW71 556 aaPredicted RBP30.24■■■□□ 2.43
CHRNB1-204ENST00000572857 PHF8Q9UPP1 1060 aa30.23■■■□□ 2.43
CHRNB1-204ENST00000572857 DLC1Q96QB1 1528 aa30.22■■■□□ 2.43
CHRNB1-204ENST00000572857 KRT28Q7Z3Y7 464 aa30.22■■■□□ 2.43
CHRNB1-204ENST00000572857 QTRT2Q9H974 415 aaKnown RBP30.22■■■□□ 2.43
CHRNB1-204ENST00000572857 FMN2Q9NZ56 1722 aa30.22■■■□□ 2.43
CHRNB1-204ENST00000572857 MINK1Q8N4C8 1332 aaPredicted RBP30.22■■■□□ 2.43
CHRNB1-204ENST00000572857 PMFBP1Q8TBY8 1022 aa30.16■■■□□ 2.42
CHRNB1-204ENST00000572857 SPATA31A3Q5VYP0 1347 aa30.16■■■□□ 2.42
CHRNB1-204ENST00000572857 PSME1Q06323 249 aa30.15■■■□□ 2.42
CHRNB1-204ENST00000572857 USP21Q9UK80 565 aa30.15■■■□□ 2.42
CHRNB1-204ENST00000572857 RBM6P78332 1123 aaKnown RBP30.13■■■□□ 2.41
CHRNB1-204ENST00000572857 PLEKHG5O94827 1062 aa30.12■■■□□ 2.41
CHRNB1-204ENST00000572857 WASLO00401 505 aaPredicted RBP30.11■■■□□ 2.41
CHRNB1-204ENST00000572857 LMOD2Q6P5Q4 547 aa30.11■■■□□ 2.41
CHRNB1-204ENST00000572857 FNBP4Q8N3X1 1017 aaPredicted RBP30.11■■■□□ 2.41
CHRNB1-204ENST00000572857 COL22A1Q8NFW1 1626 aaPredicted RBP30.11■■■□□ 2.41
CHRNB1-204ENST00000572857 KIF1AQ12756 1690 aa30.11■■■□□ 2.41
CHRNB1-204ENST00000572857 ANKARQ7Z5J8 1434 aa30.1■■■□□ 2.41
CHRNB1-204ENST00000572857 PRR36Q9H6K5 1346 aa30.07■■■□□ 2.4
CHRNB1-204ENST00000572857 NBPF1Q3BBV0 1214 aa30.07■■■□□ 2.4
CHRNB1-204ENST00000572857 TRPC5Q9UL62 973 aaPredicted RBP30.07■■■□□ 2.4
CHRNB1-204ENST00000572857 RGPD8O14715 1765 aaPredicted RBP30.07■■■□□ 2.4
CHRNB1-204ENST00000572857 HAP1P54257 671 aaPredicted RBP30.06■■■□□ 2.4
CHRNB1-204ENST00000572857 ADGRB2O60241 1585 aa30.06■■■□□ 2.4
CHRNB1-204ENST00000572857 CDK12Q9NYV4 1490 aaPredicted RBP30.06■■■□□ 2.4
CHRNB1-204ENST00000572857 EIF3AQ14152 1382 aaKnown RBP30.05■■■□□ 2.4
CHRNB1-204ENST00000572857 CABLES1Q8TDN4 633 aa30.05■■■□□ 2.4
CHRNB1-204ENST00000572857 SIN3AQ96ST3 1273 aa30.05■■■□□ 2.4
CHRNB1-204ENST00000572857 TNS3Q68CZ2 1445 aa30.04■■■□□ 2.4
CHRNB1-204ENST00000572857 NEUROD1Q13562 356 aa30.03■■■□□ 2.4
CHRNB1-204ENST00000572857 SBNO1A3KN83 1393 aa30.03■■■□□ 2.4
CHRNB1-204ENST00000572857 UPF1Q92900 1129 aaKnown RBP eCLIP30.02■■■□□ 2.4
CHRNB1-204ENST00000572857 L3MBTL2Q969R5 705 aa30.02■■■□□ 2.4
CHRNB1-204ENST00000572857 USP32Q8NFA0 1604 aa30.01■■■□□ 2.39
CHRNB1-204ENST00000572857 RGS12O14924 1447 aa30■■■□□ 2.39
CHRNB1-204ENST00000572857 NGDNQ8NEJ9 315 aaKnown RBP30■■■□□ 2.39
CHRNB1-204ENST00000572857 GPRASP1Q5JY77 1395 aa30■■■□□ 2.39
CHRNB1-204ENST00000572857 TULP4Q9NRJ4 1543 aa29.99■■■□□ 2.39
CHRNB1-204ENST00000572857 NUDT16Q96DE0 195 aaKnown RBP29.98■■■□□ 2.39
CHRNB1-204ENST00000572857 CDK19Q9BWU1 502 aa29.98■■■□□ 2.39
CHRNB1-204ENST00000572857 ARHGEF10O15013 1369 aa29.98■■■□□ 2.39
CHRNB1-204ENST00000572857 BCL9LQ86UU0 1499 aa29.97■■■□□ 2.39
CHRNB1-204ENST00000572857 ATRNO75882 1429 aa29.96■■■□□ 2.39
CHRNB1-204ENST00000572857 ARHGEF28Q8N1W1 1705 aaKnown RBP29.95■■■□□ 2.38
CHRNB1-204ENST00000572857 PAK3O75914 559 aaPredicted RBP29.93■■■□□ 2.38
CHRNB1-204ENST00000572857 UNC5CLQ8IV45 518 aa29.93■■■□□ 2.38
CHRNB1-204ENST00000572857 GJD4Q96KN9 370 aaPredicted RBP29.91■■■□□ 2.38
CHRNB1-204ENST00000572857 KIAA1210Q9ULL0 1709 aa29.91■■■□□ 2.38
CHRNB1-204ENST00000572857 CENPJQ9HC77 1338 aaPredicted RBP29.88■■■□□ 2.37
CHRNB1-204ENST00000572857 ATP7BP35670 1465 aa29.87■■■□□ 2.37
CHRNB1-204ENST00000572857 SLIT2O94813 1529 aa29.87■■■□□ 2.37
CHRNB1-204ENST00000572857 CCDC61Q9Y6R9 512 aa29.87■■■□□ 2.37
CHRNB1-204ENST00000572857 MARF1Q9Y4F3 1742 aaKnown RBP29.87■■■□□ 2.37
CHRNB1-204ENST00000572857 FAM83GA6ND36 823 aa29.85■■■□□ 2.37
CHRNB1-204ENST00000572857 SRPK2P78362 688 aaKnown RBP29.85■■■□□ 2.37
CHRNB1-204ENST00000572857 ACEP12821 1306 aa29.82■■■□□ 2.36
CHRNB1-204ENST00000572857 CABP2Q9NPB3 220 aa29.82■■■□□ 2.36
CHRNB1-204ENST00000572857 CCDC9Q9Y3X0 531 aaKnown RBP29.82■■■□□ 2.36
CHRNB1-204ENST00000572857 NBPF8Q3BBV2 869 aa29.81■■■□□ 2.36
CHRNB1-204ENST00000572857 TRPM3Q9HCF6 1732 aaPredicted RBP29.81■■■□□ 2.36
CHRNB1-204ENST00000572857 ATAD2Q6PL18 1390 aa29.79■■■□□ 2.36
CHRNB1-204ENST00000572857 PLEKHG3A1L390 1219 aa29.79■■■□□ 2.36
CHRNB1-204ENST00000572857 RALGAPBQ86X10 1494 aa29.79■■■□□ 2.36
CHRNB1-204ENST00000572857 TRIM26Q12899 539 aaPredicted RBP29.78■■■□□ 2.36
CHRNB1-204ENST00000572857 VPS72Q15906 364 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms