RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 FMN2Q9NZ56 1722 aa20.05■□□□□ 0.8
RPAIN-211ENST00000572174 ADGRB2O60241 1585 aa20.04■□□□□ 0.8
RPAIN-211ENST00000572174 HSPA1LP34931 641 aa20.04■□□□□ 0.8
RPAIN-211ENST00000572174 SIN3AQ96ST3 1273 aa20.04■□□□□ 0.8
RPAIN-211ENST00000572174 NHSL1Q5SYE7 1610 aa20.03■□□□□ 0.8
RPAIN-211ENST00000572174 L3MBTL2Q969R5 705 aa20.03■□□□□ 0.8
RPAIN-211ENST00000572174 POGKQ9P215 609 aa20.01■□□□□ 0.79
RPAIN-211ENST00000572174 KIF1AQ12756 1690 aa20■□□□□ 0.79
RPAIN-211ENST00000572174 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
RPAIN-211ENST00000572174 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
RPAIN-211ENST00000572174 COL16A1Q07092 1604 aaPredicted RBP19.98■□□□□ 0.79
RPAIN-211ENST00000572174 PRAM1Q96QH2 718 aa19.98■□□□□ 0.79
RPAIN-211ENST00000572174 ITSN1Q15811 1721 aa19.97■□□□□ 0.79
RPAIN-211ENST00000572174 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
RPAIN-211ENST00000572174 TRAK1Q9UPV9 953 aa19.97■□□□□ 0.79
RPAIN-211ENST00000572174 PLEKHH1Q9ULM0 1364 aa19.96■□□□□ 0.79
RPAIN-211ENST00000572174 RGPD8O14715 1765 aaPredicted RBP19.95■□□□□ 0.78
RPAIN-211ENST00000572174 SHPRHQ149N8 1683 aa19.95■□□□□ 0.78
RPAIN-211ENST00000572174 BRINP3Q76B58 766 aa19.95■□□□□ 0.78
RPAIN-211ENST00000572174 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
RPAIN-211ENST00000572174 ROCK2O75116 1388 aaKnown RBP19.94■□□□□ 0.78
RPAIN-211ENST00000572174 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
RPAIN-211ENST00000572174 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
RPAIN-211ENST00000572174 JCADQ9P266 1359 aa19.91■□□□□ 0.78
RPAIN-211ENST00000572174 RALGAPBQ86X10 1494 aa19.91■□□□□ 0.78
RPAIN-211ENST00000572174 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
RPAIN-211ENST00000572174 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
RPAIN-211ENST00000572174 TULP4Q9NRJ4 1543 aa19.9■□□□□ 0.78
RPAIN-211ENST00000572174 GPRASP1Q5JY77 1395 aa19.88■□□□□ 0.77
RPAIN-211ENST00000572174 NPHP3Q7Z494 1330 aa19.88■□□□□ 0.77
RPAIN-211ENST00000572174 NBPF1Q3BBV0 1214 aa19.88■□□□□ 0.77
RPAIN-211ENST00000572174 ESCO1Q5FWF5 840 aa19.87■□□□□ 0.77
RPAIN-211ENST00000572174 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
RPAIN-211ENST00000572174 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-211ENST00000572174 CENPJQ9HC77 1338 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-211ENST00000572174 USP32Q8NFA0 1604 aa19.86■□□□□ 0.77
RPAIN-211ENST00000572174 LRRC59Q96AG4 307 aaKnown RBP19.85■□□□□ 0.77
RPAIN-211ENST00000572174 SPATA31A6Q5VVP1 1343 aa19.84■□□□□ 0.77
RPAIN-211ENST00000572174 WASLO00401 505 aaPredicted RBP19.83■□□□□ 0.77
RPAIN-211ENST00000572174 ORAI2Q96SN7 254 aa19.83■□□□□ 0.77
RPAIN-211ENST00000572174 TOPAZ1Q8N9V7 1692 aa19.82■□□□□ 0.76
RPAIN-211ENST00000572174 SOS2Q07890 1332 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-211ENST00000572174 HIRIP3Q9BW71 556 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-211ENST00000572174 DISP3Q9P2K9 1392 aa19.81■□□□□ 0.76
RPAIN-211ENST00000572174 COL22A1Q8NFW1 1626 aaPredicted RBP19.8■□□□□ 0.76
RPAIN-211ENST00000572174 NUTM2FA1L443 756 aa19.8■□□□□ 0.76
RPAIN-211ENST00000572174 NBPF8Q3BBV2 869 aa19.8■□□□□ 0.76
RPAIN-211ENST00000572174 CARD11Q9BXL7 1154 aa19.8■□□□□ 0.76
RPAIN-211ENST00000572174 PHF8Q9UPP1 1060 aa19.8■□□□□ 0.76
RPAIN-211ENST00000572174 PXDNQ92626 1479 aa19.79■□□□□ 0.76
RPAIN-211ENST00000572174 ATP7BP35670 1465 aa19.79■□□□□ 0.76
RPAIN-211ENST00000572174 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
RPAIN-211ENST00000572174 PSME1Q06323 249 aa19.77■□□□□ 0.76
RPAIN-211ENST00000572174 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
RPAIN-211ENST00000572174 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
RPAIN-211ENST00000572174 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
RPAIN-211ENST00000572174 PNPLA6Q8IY17 1366 aa19.75■□□□□ 0.75
RPAIN-211ENST00000572174 FOXO3O43524 673 aa19.75■□□□□ 0.75
RPAIN-211ENST00000572174 MARF1Q9Y4F3 1742 aaKnown RBP19.74■□□□□ 0.75
RPAIN-211ENST00000572174 CDK19Q9BWU1 502 aa19.74■□□□□ 0.75
RPAIN-211ENST00000572174 SRPK2P78362 688 aaKnown RBP19.73■□□□□ 0.75
RPAIN-211ENST00000572174 TRPM3Q9HCF6 1732 aaPredicted RBP19.73■□□□□ 0.75
RPAIN-211ENST00000572174 SBNO1A3KN83 1393 aa19.72■□□□□ 0.75
RPAIN-211ENST00000572174 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
RPAIN-211ENST00000572174 NUDT16Q96DE0 195 aaKnown RBP19.72■□□□□ 0.75
RPAIN-211ENST00000572174 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
RPAIN-211ENST00000572174 ARHGEF10O15013 1369 aa19.71■□□□□ 0.75
RPAIN-211ENST00000572174 TNS3Q68CZ2 1445 aa19.71■□□□□ 0.75
RPAIN-211ENST00000572174 PRR36Q9H6K5 1346 aa19.71■□□□□ 0.75
RPAIN-211ENST00000572174 MEX3CQ5U5Q3 659 aaKnown RBP19.7■□□□□ 0.74
RPAIN-211ENST00000572174 KRT28Q7Z3Y7 464 aa19.7■□□□□ 0.74
RPAIN-211ENST00000572174 NGDNQ8NEJ9 315 aaKnown RBP19.7■□□□□ 0.74
RPAIN-211ENST00000572174 ATAD2Q6PL18 1390 aa19.7■□□□□ 0.74
RPAIN-211ENST00000572174 ALS2Q96Q42 1657 aa19.69■□□□□ 0.74
RPAIN-211ENST00000572174 SPATA31A3Q5VYP0 1347 aa19.68■□□□□ 0.74
RPAIN-211ENST00000572174 LRP6O75581 1613 aa19.68■□□□□ 0.74
RPAIN-211ENST00000572174 POLR3AO14802 1390 aaPredicted RBP19.68■□□□□ 0.74
RPAIN-211ENST00000572174 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
RPAIN-211ENST00000572174 PMFBP1Q8TBY8 1022 aa19.67■□□□□ 0.74
RPAIN-211ENST00000572174 ABCA3Q99758 1704 aa19.67■□□□□ 0.74
RPAIN-211ENST00000572174 AKAP12Q02952 1782 aa19.67■□□□□ 0.74
RPAIN-211ENST00000572174 XPCQ01831 940 aaPredicted RBP19.66■□□□□ 0.74
RPAIN-211ENST00000572174 BRD4O60885 1362 aaPredicted RBP19.66■□□□□ 0.74
RPAIN-211ENST00000572174 PLEKHG3A1L390 1219 aa19.65■□□□□ 0.74
RPAIN-211ENST00000572174 USP47Q96K76 1375 aa19.65■□□□□ 0.74
RPAIN-211ENST00000572174 NUTM2BA6NNL0 878 aaPredicted RBP19.64■□□□□ 0.73
RPAIN-211ENST00000572174 NUTM2EB1AL46 878 aaPredicted RBP19.64■□□□□ 0.73
RPAIN-211ENST00000572174 NUTM2AQ8IVF1 878 aaPredicted RBP19.64■□□□□ 0.73
RPAIN-211ENST00000572174 CABP2Q9NPB3 220 aa19.63■□□□□ 0.73
RPAIN-211ENST00000572174 PUS7Q96PZ0 661 aaKnown RBP19.62■□□□□ 0.73
RPAIN-211ENST00000572174 ZNF772Q68DY9 489 aaPredicted RBP19.61■□□□□ 0.73
RPAIN-211ENST00000572174 NINLQ9Y2I6 1382 aa19.6■□□□□ 0.73
RPAIN-211ENST00000572174 ACEP12821 1306 aa19.6■□□□□ 0.73
RPAIN-211ENST00000572174 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
RPAIN-211ENST00000572174 MON2Q7Z3U7 1717 aa19.59■□□□□ 0.73
RPAIN-211ENST00000572174 CRYBG1Q9Y4K1 1723 aa19.59■□□□□ 0.73
RPAIN-211ENST00000572174 LMOD2Q6P5Q4 547 aa19.59■□□□□ 0.73
RPAIN-211ENST00000572174 ST20-MTHFSA0A0A6YYL1 179 aa19.58■□□□□ 0.72
RPAIN-211ENST00000572174 CDCA8Q53HL2 280 aa19.58■□□□□ 0.72
RPAIN-211ENST00000572174 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms