RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
LITAF-210ENST00000571976 POGKQ9P215 609 aa23.19■■□□□ 1.3
LITAF-210ENST00000571976 HSPA1LP34931 641 aa23.17■■□□□ 1.3
LITAF-210ENST00000571976 MST1RQ04912 1400 aa23.16■■□□□ 1.3
LITAF-210ENST00000571976 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
LITAF-210ENST00000571976 NBPF8Q3BBV2 869 aa23.14■■□□□ 1.29
LITAF-210ENST00000571976 CDC42BPGQ6DT37 1551 aa23.14■■□□□ 1.29
LITAF-210ENST00000571976 TRPM1Q7Z4N2 1603 aa23.13■■□□□ 1.29
LITAF-210ENST00000571976 SAFB2Q14151 953 aaKnown RBP eCLIP23.13■■□□□ 1.29
LITAF-210ENST00000571976 TIMELESSQ9UNS1 1208 aa23.13■■□□□ 1.29
LITAF-210ENST00000571976 BRINP3Q76B58 766 aa23.11■■□□□ 1.29
LITAF-210ENST00000571976 ROCK2O75116 1388 aaKnown RBP23.1■■□□□ 1.29
LITAF-210ENST00000571976 C1orf167Q5SNV9 1468 aa23.1■■□□□ 1.29
LITAF-210ENST00000571976 ARHGEF28Q8N1W1 1705 aaKnown RBP23.09■■□□□ 1.29
LITAF-210ENST00000571976 MINK1Q8N4C8 1332 aaPredicted RBP23.06■■□□□ 1.28
LITAF-210ENST00000571976 GPRASP1Q5JY77 1395 aa23.04■■□□□ 1.28
LITAF-210ENST00000571976 NUTM2FA1L443 756 aa23.04■■□□□ 1.28
LITAF-210ENST00000571976 ORAI2Q96SN7 254 aa23.04■■□□□ 1.28
LITAF-210ENST00000571976 HIRIP3Q9BW71 556 aaPredicted RBP23.04■■□□□ 1.28
LITAF-210ENST00000571976 ADGRB2O60241 1585 aa23.04■■□□□ 1.28
LITAF-210ENST00000571976 RALGAPBQ86X10 1494 aa23.04■■□□□ 1.28
LITAF-210ENST00000571976 FMN2Q9NZ56 1722 aa23.03■■□□□ 1.28
LITAF-210ENST00000571976 AHDC1Q5TGY3 1603 aaPredicted RBP23.02■■□□□ 1.28
LITAF-210ENST00000571976 ESCO1Q5FWF5 840 aa23.02■■□□□ 1.28
LITAF-210ENST00000571976 CARD11Q9BXL7 1154 aa23.02■■□□□ 1.28
LITAF-210ENST00000571976 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
LITAF-210ENST00000571976 WASLO00401 505 aaPredicted RBP23.01■■□□□ 1.27
LITAF-210ENST00000571976 PHLPP1O60346 1717 aa23.01■■□□□ 1.27
LITAF-210ENST00000571976 EIF3AQ14152 1382 aaKnown RBP23■■□□□ 1.27
LITAF-210ENST00000571976 ANKARQ7Z5J8 1434 aa22.98■■□□□ 1.27
LITAF-210ENST00000571976 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
LITAF-210ENST00000571976 COL16A1Q07092 1604 aaPredicted RBP22.96■■□□□ 1.27
LITAF-210ENST00000571976 DDX17Q92841 729 aaKnown RBP22.95■■□□□ 1.26
LITAF-210ENST00000571976 CDK19Q9BWU1 502 aa22.94■■□□□ 1.26
LITAF-210ENST00000571976 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
LITAF-210ENST00000571976 NPHP3Q7Z494 1330 aa22.93■■□□□ 1.26
LITAF-210ENST00000571976 QRICH2Q9H0J4 1663 aa22.93■■□□□ 1.26
LITAF-210ENST00000571976 JCADQ9P266 1359 aa22.92■■□□□ 1.26
LITAF-210ENST00000571976 FOXO3O43524 673 aa22.92■■□□□ 1.26
LITAF-210ENST00000571976 LRRC59Q96AG4 307 aaKnown RBP22.92■■□□□ 1.26
LITAF-210ENST00000571976 PHF8Q9UPP1 1060 aa22.92■■□□□ 1.26
LITAF-210ENST00000571976 SOS2Q07890 1332 aaPredicted RBP22.91■■□□□ 1.26
LITAF-210ENST00000571976 RGPD8O14715 1765 aaPredicted RBP22.91■■□□□ 1.26
LITAF-210ENST00000571976 KIF1AQ12756 1690 aa22.9■■□□□ 1.26
LITAF-210ENST00000571976 USP32Q8NFA0 1604 aa22.9■■□□□ 1.26
LITAF-210ENST00000571976 PRR36Q9H6K5 1346 aa22.9■■□□□ 1.26
LITAF-210ENST00000571976 NUDT16Q96DE0 195 aaKnown RBP22.89■■□□□ 1.25
LITAF-210ENST00000571976 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
LITAF-210ENST00000571976 SRPK2P78362 688 aaKnown RBP22.87■■□□□ 1.25
LITAF-210ENST00000571976 PMFBP1Q8TBY8 1022 aa22.86■■□□□ 1.25
LITAF-210ENST00000571976 SBNO2Q9Y2G9 1366 aa22.86■■□□□ 1.25
LITAF-210ENST00000571976 ATP7BP35670 1465 aa22.85■■□□□ 1.25
LITAF-210ENST00000571976 CCDC61Q9Y6R9 512 aa22.85■■□□□ 1.25
LITAF-210ENST00000571976 PXDNQ92626 1479 aa22.85■■□□□ 1.25
LITAF-210ENST00000571976 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
LITAF-210ENST00000571976 XPCQ01831 940 aaPredicted RBP22.84■■□□□ 1.25
LITAF-210ENST00000571976 PSME1Q06323 249 aa22.84■■□□□ 1.25
LITAF-210ENST00000571976 KRT28Q7Z3Y7 464 aa22.84■■□□□ 1.25
LITAF-210ENST00000571976 CABP2Q9NPB3 220 aa22.84■■□□□ 1.25
LITAF-210ENST00000571976 SHPRHQ149N8 1683 aa22.83■■□□□ 1.24
LITAF-210ENST00000571976 ITSN1Q15811 1721 aa22.82■■□□□ 1.24
LITAF-210ENST00000571976 ST20-MTHFSA0A0A6YYL1 179 aa22.82■■□□□ 1.24
LITAF-210ENST00000571976 SLC24A1O60721 1099 aa22.81■■□□□ 1.24
LITAF-210ENST00000571976 NGDNQ8NEJ9 315 aaKnown RBP22.81■■□□□ 1.24
LITAF-210ENST00000571976 MED1Q15648 1581 aaPredicted RBP22.8■■□□□ 1.24
LITAF-210ENST00000571976 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
LITAF-210ENST00000571976 USP47Q96K76 1375 aa22.8■■□□□ 1.24
LITAF-210ENST00000571976 PLEKHG3A1L390 1219 aa22.79■■□□□ 1.24
LITAF-210ENST00000571976 SPATA31A3Q5VYP0 1347 aa22.78■■□□□ 1.24
LITAF-210ENST00000571976 TOPAZ1Q8N9V7 1692 aa22.77■■□□□ 1.24
LITAF-210ENST00000571976 TESK2Q96S53 571 aa22.77■■□□□ 1.24
LITAF-210ENST00000571976 SBNO1A3KN83 1393 aa22.76■■□□□ 1.23
LITAF-210ENST00000571976 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
LITAF-210ENST00000571976 PPIP5K1Q6PFW1 1433 aa22.76■■□□□ 1.23
LITAF-210ENST00000571976 ACEP12821 1306 aa22.75■■□□□ 1.23
LITAF-210ENST00000571976 POLR3AO14802 1390 aaPredicted RBP22.75■■□□□ 1.23
LITAF-210ENST00000571976 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
LITAF-210ENST00000571976 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
LITAF-210ENST00000571976 NUTM2AQ8IVF1 878 aaPredicted RBP22.74■■□□□ 1.23
LITAF-210ENST00000571976 CABP1Q9NZU7 370 aa22.74■■□□□ 1.23
LITAF-210ENST00000571976 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
LITAF-210ENST00000571976 PUS7Q96PZ0 661 aaKnown RBP22.73■■□□□ 1.23
LITAF-210ENST00000571976 TNS3Q68CZ2 1445 aa22.73■■□□□ 1.23
LITAF-210ENST00000571976 PHF23Q9BUL5 403 aaPredicted RBP22.72■■□□□ 1.23
LITAF-210ENST00000571976 LRP6O75581 1613 aa22.71■■□□□ 1.23
LITAF-210ENST00000571976 COL22A1Q8NFW1 1626 aaPredicted RBP22.71■■□□□ 1.23
LITAF-210ENST00000571976 MEX3CQ5U5Q3 659 aaKnown RBP22.7■■□□□ 1.22
LITAF-210ENST00000571976 ARHGEF10O15013 1369 aa22.7■■□□□ 1.22
LITAF-210ENST00000571976 PAK3O75914 559 aaPredicted RBP22.69■■□□□ 1.22
LITAF-210ENST00000571976 TMF1P82094 1093 aa22.69■■□□□ 1.22
LITAF-210ENST00000571976 LMOD2Q6P5Q4 547 aa22.69■■□□□ 1.22
LITAF-210ENST00000571976 TRPM3Q9HCF6 1732 aaPredicted RBP22.68■■□□□ 1.22
LITAF-210ENST00000571976 EIF4G2P78344 907 aaKnown RBP eCLIP22.68■■□□□ 1.22
LITAF-210ENST00000571976 BRD4O60885 1362 aaPredicted RBP22.66■■□□□ 1.22
LITAF-210ENST00000571976 ZNF692Q9BU19 519 aaPredicted RBP22.66■■□□□ 1.22
LITAF-210ENST00000571976 CDCA8Q53HL2 280 aa22.64■■□□□ 1.21
LITAF-210ENST00000571976 TMC1Q8TDI8 760 aa22.64■■□□□ 1.21
LITAF-210ENST00000571976 ALS2Q96Q42 1657 aa22.63■■□□□ 1.21
LITAF-210ENST00000571976 ADAMTS2O95450 1211 aa22.63■■□□□ 1.21
LITAF-210ENST00000571976 USP6P35125 1406 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms