RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 PTCH1Q13635 1447 aa31.77■■■□□ 2.68
UBFD1-210ENST00000571064 MPHOSPH9Q99550 1183 aa31.77■■■□□ 2.68
UBFD1-210ENST00000571064 ZRANB1Q9UGI0 708 aa31.77■■■□□ 2.68
UBFD1-210ENST00000571064 SLC4A1APQ9BWU0 796 aaKnown RBP31.76■■■□□ 2.67
UBFD1-210ENST00000571064 ATRNO75882 1429 aa31.75■■■□□ 2.67
UBFD1-210ENST00000571064 COL22A1Q8NFW1 1626 aaPredicted RBP31.69■■■□□ 2.66
UBFD1-210ENST00000571064 FOXD1Q16676 465 aa31.69■■■□□ 2.66
UBFD1-210ENST00000571064 KIF1BO60333 1816 aa31.67■■■□□ 2.66
UBFD1-210ENST00000571064 MYOM2P54296 1465 aa31.66■■■□□ 2.66
UBFD1-210ENST00000571064 BCL9LQ86UU0 1499 aa31.66■■■□□ 2.66
UBFD1-210ENST00000571064 EP400Q96L91 3159 aa31.66■■■□□ 2.66
UBFD1-210ENST00000571064 VGFO15240 615 aaPredicted RBP31.66■■■□□ 2.66
UBFD1-210ENST00000571064 ESCO1Q5FWF5 840 aa31.63■■■□□ 2.65
UBFD1-210ENST00000571064 CCDC125Q86Z20 511 aa31.63■■■□□ 2.65
UBFD1-210ENST00000571064 XPCQ01831 940 aaPredicted RBP31.62■■■□□ 2.65
UBFD1-210ENST00000571064 PRAG1Q86YV5 1406 aa31.62■■■□□ 2.65
UBFD1-210ENST00000571064 NPHP3Q7Z494 1330 aa31.61■■■□□ 2.65
UBFD1-210ENST00000571064 GJD4Q96KN9 370 aaPredicted RBP31.6■■■□□ 2.65
UBFD1-210ENST00000571064 PXDNQ92626 1479 aa31.59■■■□□ 2.65
UBFD1-210ENST00000571064 FOXO3O43524 673 aa31.58■■■□□ 2.65
UBFD1-210ENST00000571064 MARF1Q9Y4F3 1742 aaKnown RBP31.56■■■□□ 2.64
UBFD1-210ENST00000571064 RPGRIP1LQ68CZ1 1315 aa31.53■■■□□ 2.64
UBFD1-210ENST00000571064 CDC42BPGQ6DT37 1551 aa31.52■■■□□ 2.64
UBFD1-210ENST00000571064 DHX57Q6P158 1386 aaKnown RBP31.52■■■□□ 2.64
UBFD1-210ENST00000571064 NUTM2FA1L443 756 aa31.51■■■□□ 2.63
UBFD1-210ENST00000571064 UNC5CLQ8IV45 518 aa31.48■■■□□ 2.63
UBFD1-210ENST00000571064 RALGAPBQ86X10 1494 aa31.47■■■□□ 2.63
UBFD1-210ENST00000571064 ANKRD30BQ9BXX2 1392 aa31.47■■■□□ 2.63
UBFD1-210ENST00000571064 PPLO60437 1756 aa31.47■■■□□ 2.63
UBFD1-210ENST00000571064 BLMP54132 1417 aaPredicted RBP31.47■■■□□ 2.63
UBFD1-210ENST00000571064 GLI3P10071 1580 aa31.47■■■□□ 2.63
UBFD1-210ENST00000571064 LRPPRCP42704 1394 aaKnown RBP31.45■■■□□ 2.63
UBFD1-210ENST00000571064 WAPLQ7Z5K2 1190 aa31.45■■■□□ 2.63
UBFD1-210ENST00000571064 DEFB132Q7Z7B7 95 aa31.45■■■□□ 2.63
UBFD1-210ENST00000571064 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.45■■■□□ 2.63
UBFD1-210ENST00000571064 SLIT2O94813 1529 aa31.44■■■□□ 2.62
UBFD1-210ENST00000571064 STK26Q9P289 416 aa31.44■■■□□ 2.62
UBFD1-210ENST00000571064 SPATA31A3Q5VYP0 1347 aa31.41■■■□□ 2.62
UBFD1-210ENST00000571064 ADGRF5Q8IZF2 1346 aa31.4■■■□□ 2.62
UBFD1-210ENST00000571064 BRWD3Q6RI45 1802 aa31.39■■■□□ 2.62
UBFD1-210ENST00000571064 PLEKHH1Q9ULM0 1364 aa31.37■■■□□ 2.61
UBFD1-210ENST00000571064 CCDC144AA2RUR9 1427 aa31.37■■■□□ 2.61
UBFD1-210ENST00000571064 SEPT12Q8IYM1 358 aa31.36■■■□□ 2.61
UBFD1-210ENST00000571064 TECPR2O15040 1411 aa31.35■■■□□ 2.61
UBFD1-210ENST00000571064 SF3B2Q13435 895 aaKnown RBP31.35■■■□□ 2.61
UBFD1-210ENST00000571064 KRT28Q7Z3Y7 464 aa31.34■■■□□ 2.61
UBFD1-210ENST00000571064 USP32Q8NFA0 1604 aa31.34■■■□□ 2.61
UBFD1-210ENST00000571064 TMEM132EQ6IEE7 984 aa31.33■■■□□ 2.61
UBFD1-210ENST00000571064 PLEKHG5O94827 1062 aa31.31■■■□□ 2.6
UBFD1-210ENST00000571064 CABLES1Q8TDN4 633 aa31.31■■■□□ 2.6
UBFD1-210ENST00000571064 ABCC11Q96J66 1382 aa31.3■■■□□ 2.6
UBFD1-210ENST00000571064 FMN2Q9NZ56 1722 aa31.3■■■□□ 2.6
UBFD1-210ENST00000571064 HAP1P54257 671 aaPredicted RBP31.3■■■□□ 2.6
UBFD1-210ENST00000571064 RGL3Q3MIN7 710 aa31.3■■■□□ 2.6
UBFD1-210ENST00000571064 VPS72Q15906 364 aa31.29■■■□□ 2.6
UBFD1-210ENST00000571064 KIF1AQ12756 1690 aa31.29■■■□□ 2.6
UBFD1-210ENST00000571064 SPATA31E1Q6ZUB1 1445 aa31.28■■■□□ 2.6
UBFD1-210ENST00000571064 CCDC9Q9Y3X0 531 aaKnown RBP31.28■■■□□ 2.6
UBFD1-210ENST00000571064 ONECUT3O60422 494 aaPredicted RBP31.25■■■□□ 2.59
UBFD1-210ENST00000571064 KRT27Q7Z3Y8 459 aa31.25■■■□□ 2.59
UBFD1-210ENST00000571064 TNS3Q68CZ2 1445 aa31.24■■■□□ 2.59
UBFD1-210ENST00000571064 LRP5O75197 1615 aa31.24■■■□□ 2.59
UBFD1-210ENST00000571064 SIN3AQ96ST3 1273 aa31.24■■■□□ 2.59
UBFD1-210ENST00000571064 KNDC1Q76NI1 1749 aa31.24■■■□□ 2.59
UBFD1-210ENST00000571064 PHF8Q9UPP1 1060 aa31.23■■■□□ 2.59
UBFD1-210ENST00000571064 PSDA5PKW4 1024 aaPredicted RBP31.22■■■□□ 2.59
UBFD1-210ENST00000571064 PLCH1Q4KWH8 1693 aa31.22■■■□□ 2.59
UBFD1-210ENST00000571064 YTHDC2Q9H6S0 1430 aaKnown RBP31.21■■■□□ 2.59
UBFD1-210ENST00000571064 RGPD8O14715 1765 aaPredicted RBP31.2■■■□□ 2.59
UBFD1-210ENST00000571064 PSME1Q06323 249 aa31.2■■■□□ 2.59
UBFD1-210ENST00000571064 LMOD2Q6P5Q4 547 aa31.2■■■□□ 2.59
UBFD1-210ENST00000571064 IFT172Q9UG01 1749 aa31.18■■■□□ 2.58
UBFD1-210ENST00000571064 NWD2Q9ULI1 1742 aa31.18■■■□□ 2.58
UBFD1-210ENST00000571064 PIK3C2GO75747 1445 aa31.18■■■□□ 2.58
UBFD1-210ENST00000571064 A0A0G2JS52 829 aa31.17■■■□□ 2.58
UBFD1-210ENST00000571064 MYT1Q01538 1121 aa31.17■■■□□ 2.58
UBFD1-210ENST00000571064 FAM83GA6ND36 823 aa31.16■■■□□ 2.58
UBFD1-210ENST00000571064 BAG6P46379 1132 aa31.16■■■□□ 2.58
UBFD1-210ENST00000571064 SBNO1A3KN83 1393 aa31.15■■■□□ 2.58
UBFD1-210ENST00000571064 ABCA3Q99758 1704 aa31.15■■■□□ 2.58
UBFD1-210ENST00000571064 SIRT1Q96EB6 747 aa31.13■■■□□ 2.57
UBFD1-210ENST00000571064 NRXN1Q9ULB1 1477 aa31.13■■■□□ 2.57
UBFD1-210ENST00000571064 NEUROD1Q13562 356 aa31.12■■■□□ 2.57
UBFD1-210ENST00000571064 FAM98CQ17RN3 349 aaKnown RBP31.12■■■□□ 2.57
UBFD1-210ENST00000571064 ARHGEF10O15013 1369 aa31.11■■■□□ 2.57
UBFD1-210ENST00000571064 SAFB2Q14151 953 aaKnown RBP eCLIP31.1■■■□□ 2.57
UBFD1-210ENST00000571064 CCER1Q8TC90 406 aaPredicted RBP31.1■■■□□ 2.57
UBFD1-210ENST00000571064 EN1Q05925 392 aaPredicted RBP31.08■■■□□ 2.57
UBFD1-210ENST00000571064 PMFBP1Q8TBY8 1022 aa31.08■■■□□ 2.57
UBFD1-210ENST00000571064 C14orf93Q9H972 538 aaKnown RBP31.07■■■□□ 2.56
UBFD1-210ENST00000571064 BTG4Q9NY30 223 aa31.07■■■□□ 2.56
UBFD1-210ENST00000571064 FAM182BQ5T319 152 aa31.06■■■□□ 2.56
UBFD1-210ENST00000571064 CLSPNQ9HAW4 1339 aa31.05■■■□□ 2.56
UBFD1-210ENST00000571064 NRAPQ86VF7 1730 aa31.05■■■□□ 2.56
UBFD1-210ENST00000571064 PRAM1Q96QH2 718 aa31.05■■■□□ 2.56
UBFD1-210ENST00000571064 CFAP70Q5T0N1 1121 aa31.04■■■□□ 2.56
UBFD1-210ENST00000571064 R3HDM1Q15032 1099 aaKnown RBP31.02■■■□□ 2.56
UBFD1-210ENST00000571064 DCAF11Q8TEB1 546 aa30.98■■■□□ 2.55
UBFD1-210ENST00000571064 L3MBTL2Q969R5 705 aa30.98■■■□□ 2.55
UBFD1-210ENST00000571064 RGPD1P0DJD0 1748 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms