RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
SMG6-207ENST00000570756 SYCP2Q9BX26 1530 aa19.57■□□□□ 0.72
SMG6-207ENST00000570756 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
SMG6-207ENST00000570756 TRAK2O60296 914 aa19.56■□□□□ 0.72
SMG6-207ENST00000570756 WWC1Q8IX03 1113 aa19.56■□□□□ 0.72
SMG6-207ENST00000570756 GZF1Q9H116 711 aaPredicted RBP19.56■□□□□ 0.72
SMG6-207ENST00000570756 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
SMG6-207ENST00000570756 PANK2Q9BZ23 570 aa19.55■□□□□ 0.72
SMG6-207ENST00000570756 DDX11L8A8MPP1 907 aa19.55■□□□□ 0.72
SMG6-207ENST00000570756 SLC24A1O60721 1099 aa19.55■□□□□ 0.72
SMG6-207ENST00000570756 DUOX2Q9NRD8 1548 aa19.54■□□□□ 0.72
SMG6-207ENST00000570756 FANCAO15360 1455 aa19.53■□□□□ 0.72
SMG6-207ENST00000570756 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
SMG6-207ENST00000570756 MYH16Q9H6N6 1097 aa19.53■□□□□ 0.72
SMG6-207ENST00000570756 PCDHB15Q9Y5E8 787 aa19.53■□□□□ 0.72
SMG6-207ENST00000570756 SPHKAPQ2M3C7 1700 aa19.52■□□□□ 0.72
SMG6-207ENST00000570756 EFCAB2Q5VUJ9 269 aa19.52■□□□□ 0.71
SMG6-207ENST00000570756 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
SMG6-207ENST00000570756 C22orf23Q9BZE7 217 aa19.51■□□□□ 0.71
SMG6-207ENST00000570756 POLR3AO14802 1390 aaPredicted RBP19.51■□□□□ 0.71
SMG6-207ENST00000570756 SPRYD3Q8NCJ5 442 aa19.51■□□□□ 0.71
SMG6-207ENST00000570756 GRPEL1Q9HAV7 217 aa19.51■□□□□ 0.71
SMG6-207ENST00000570756 CEP152O94986 1710 aa19.49■□□□□ 0.71
SMG6-207ENST00000570756 GLI2P10070 1586 aa19.48■□□□□ 0.71
SMG6-207ENST00000570756 ESPNB1AK53 854 aa19.48■□□□□ 0.71
SMG6-207ENST00000570756 HSCBQ8IWL3 235 aa19.48■□□□□ 0.71
SMG6-207ENST00000570756 VSIG10Q8N0Z9 540 aa19.47■□□□□ 0.71
SMG6-207ENST00000570756 RLBP1P12271 317 aa19.46■□□□□ 0.71
SMG6-207ENST00000570756 AFAP1Q8N556 730 aa19.46■□□□□ 0.71
SMG6-207ENST00000570756 RTEL1-TNFRSF6BF6WH68 1400 aa19.46■□□□□ 0.71
SMG6-207ENST00000570756 WDR63Q8IWG1 891 aa19.46■□□□□ 0.71
SMG6-207ENST00000570756 TRIM44Q96DX7 344 aaPredicted RBP19.46■□□□□ 0.71
SMG6-207ENST00000570756 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
SMG6-207ENST00000570756 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
SMG6-207ENST00000570756 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
SMG6-207ENST00000570756 TRPM2O94759 1503 aa19.45■□□□□ 0.7
SMG6-207ENST00000570756 MFAP1P55081 439 aaKnown RBP19.44■□□□□ 0.7
SMG6-207ENST00000570756 TRAPPC8Q9Y2L5 1435 aa19.44■□□□□ 0.7
SMG6-207ENST00000570756 ADGRL1O94910 1474 aa19.44■□□□□ 0.7
SMG6-207ENST00000570756 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
SMG6-207ENST00000570756 ZMYND15Q9H091 742 aa19.43■□□□□ 0.7
SMG6-207ENST00000570756 PTMSP20962 102 aa19.43■□□□□ 0.7
SMG6-207ENST00000570756 MVPQ14764 893 aaKnown RBP19.43■□□□□ 0.7
SMG6-207ENST00000570756 ABCC1P33527 1531 aa19.42■□□□□ 0.7
SMG6-207ENST00000570756 PHF23Q9BUL5 403 aaPredicted RBP19.42■□□□□ 0.7
SMG6-207ENST00000570756 IQSEC2Q5JU85 1478 aa19.42■□□□□ 0.7
SMG6-207ENST00000570756 NCOA3Q9Y6Q9 1424 aa19.41■□□□□ 0.7
SMG6-207ENST00000570756 KANK1Q14678 1352 aa19.41■□□□□ 0.7
SMG6-207ENST00000570756 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
SMG6-207ENST00000570756 TPM2P07951 284 aa19.41■□□□□ 0.7
SMG6-207ENST00000570756 NEUROD2Q15784 382 aa19.41■□□□□ 0.7
SMG6-207ENST00000570756 ARAP3Q8WWN8 1544 aa19.4■□□□□ 0.7
SMG6-207ENST00000570756 SHPRHQ149N8 1683 aa19.4■□□□□ 0.7
SMG6-207ENST00000570756 SKOR2Q2VWA4 1001 aaPredicted RBP19.4■□□□□ 0.7
SMG6-207ENST00000570756 GBP4Q96PP9 640 aa19.4■□□□□ 0.7
SMG6-207ENST00000570756 ZNF692Q9BU19 519 aaPredicted RBP19.4■□□□□ 0.7
SMG6-207ENST00000570756 CARD14Q9BXL6 1004 aa19.4■□□□□ 0.7
SMG6-207ENST00000570756 CCDC27Q2M243 656 aa19.4■□□□□ 0.7
SMG6-207ENST00000570756 TCP11L2Q8N4U5 519 aa19.4■□□□□ 0.7
SMG6-207ENST00000570756 CIZ1Q9ULV3 898 aaPredicted RBP19.4■□□□□ 0.7
SMG6-207ENST00000570756 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.69
SMG6-207ENST00000570756 BCL2L13Q9BXK5 485 aa19.39■□□□□ 0.69
SMG6-207ENST00000570756 TNNQ9UQP3 1299 aa19.39■□□□□ 0.69
SMG6-207ENST00000570756 ZKSCAN2Q63HK3 967 aa19.39■□□□□ 0.69
SMG6-207ENST00000570756 SNX21Q969T3 373 aa19.37■□□□□ 0.69
SMG6-207ENST00000570756 RRP7AQ9Y3A4 280 aaKnown RBP19.37■□□□□ 0.69
SMG6-207ENST00000570756 DDIT3P35638 169 aa19.37■□□□□ 0.69
SMG6-207ENST00000570756 HDAC1Q13547 482 aaPredicted RBP19.37■□□□□ 0.69
SMG6-207ENST00000570756 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
SMG6-207ENST00000570756 DZIP1LQ8IYY4 767 aaKnown RBP19.37■□□□□ 0.69
SMG6-207ENST00000570756 ERBB4Q15303 1308 aa19.37■□□□□ 0.69
SMG6-207ENST00000570756 PTPRTO14522 1441 aa19.36■□□□□ 0.69
SMG6-207ENST00000570756 CLTCL1P53675 1640 aa19.36■□□□□ 0.69
SMG6-207ENST00000570756 CT47B1P0C2W7 299 aaPredicted RBP19.35■□□□□ 0.69
SMG6-207ENST00000570756 MORC1Q86VD1 984 aa19.35■□□□□ 0.69
SMG6-207ENST00000570756 SMC5Q8IY18 1101 aa19.35■□□□□ 0.69
SMG6-207ENST00000570756 RBM25P49756 843 aaKnown RBP19.34■□□□□ 0.69
SMG6-207ENST00000570756 TNPO1Q92973 898 aaKnown RBP19.34■□□□□ 0.69
SMG6-207ENST00000570756 NEO1Q92859 1461 aa19.33■□□□□ 0.69
SMG6-207ENST00000570756 NEURL4Q96JN8 1562 aa19.33■□□□□ 0.68
SMG6-207ENST00000570756 DDX19BQ9UMR2 479 aa19.32■□□□□ 0.68
SMG6-207ENST00000570756 SBNO2Q9Y2G9 1366 aa19.32■□□□□ 0.68
SMG6-207ENST00000570756 HSP90AB1P08238 724 aaKnown RBP19.32■□□□□ 0.68
SMG6-207ENST00000570756 CFAP53Q96M91 514 aa19.32■□□□□ 0.68
SMG6-207ENST00000570756 CFAP74Q9C0B2 1584 aa19.31■□□□□ 0.68
SMG6-207ENST00000570756 CCDC173Q0VFZ6 552 aa19.31■□□□□ 0.68
SMG6-207ENST00000570756 RAB3GAP1Q15042 981 aa19.31■□□□□ 0.68
SMG6-207ENST00000570756 SPAG9O60271 1321 aaKnown RBP19.31■□□□□ 0.68
SMG6-207ENST00000570756 PDCL3Q9H2J4 239 aa19.31■□□□□ 0.68
SMG6-207ENST00000570756 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
SMG6-207ENST00000570756 ANP32BQ92688 251 aaKnown RBP19.3■□□□□ 0.68
SMG6-207ENST00000570756 MYOM2P54296 1465 aa19.3■□□□□ 0.68
SMG6-207ENST00000570756 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
SMG6-207ENST00000570756 MYO3AQ8NEV4 1616 aa19.29■□□□□ 0.68
SMG6-207ENST00000570756 GAS2L3Q86XJ1 694 aa19.29■□□□□ 0.68
SMG6-207ENST00000570756 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
SMG6-207ENST00000570756 ABCA6Q8N139 1617 aa19.28■□□□□ 0.68
SMG6-207ENST00000570756 TET3O43151 1660 aa19.27■□□□□ 0.68
SMG6-207ENST00000570756 GOLGA6L22H0YM25 854 aa19.27■□□□□ 0.68
SMG6-207ENST00000570756 SMC4Q9NTJ3 1288 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms