RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
CHRNB1-203ENST00000570557 COL16A1Q07092 1604 aaPredicted RBP18.81■□□□□ 0.6
CHRNB1-203ENST00000570557 NHSL1Q5SYE7 1610 aa18.79■□□□□ 0.6
CHRNB1-203ENST00000570557 PRAM1Q96QH2 718 aa18.76■□□□□ 0.59
CHRNB1-203ENST00000570557 FMN2Q9NZ56 1722 aa18.76■□□□□ 0.59
CHRNB1-203ENST00000570557 MED1Q15648 1581 aaPredicted RBP18.76■□□□□ 0.59
CHRNB1-203ENST00000570557 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
CHRNB1-203ENST00000570557 ARHGEF28Q8N1W1 1705 aaKnown RBP18.74■□□□□ 0.59
CHRNB1-203ENST00000570557 ADGRB2O60241 1585 aa18.74■□□□□ 0.59
CHRNB1-203ENST00000570557 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
CHRNB1-203ENST00000570557 TRAK1Q9UPV9 953 aa18.74■□□□□ 0.59
CHRNB1-203ENST00000570557 NBPF1Q3BBV0 1214 aa18.73■□□□□ 0.59
CHRNB1-203ENST00000570557 JCADQ9P266 1359 aa18.71■□□□□ 0.59
CHRNB1-203ENST00000570557 TRPM1Q7Z4N2 1603 aa18.71■□□□□ 0.58
CHRNB1-203ENST00000570557 DISP3Q9P2K9 1392 aa18.7■□□□□ 0.58
CHRNB1-203ENST00000570557 POGKQ9P215 609 aa18.7■□□□□ 0.58
CHRNB1-203ENST00000570557 SHPRHQ149N8 1683 aa18.69■□□□□ 0.58
CHRNB1-203ENST00000570557 PCGF6Q9BYE7 350 aa18.69■□□□□ 0.58
CHRNB1-203ENST00000570557 SOS2Q07890 1332 aaPredicted RBP18.69■□□□□ 0.58
CHRNB1-203ENST00000570557 RGPD8O14715 1765 aaPredicted RBP18.68■□□□□ 0.58
CHRNB1-203ENST00000570557 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHRNB1-203ENST00000570557 DDX17Q92841 729 aaKnown RBP18.68■□□□□ 0.58
CHRNB1-203ENST00000570557 USP32Q8NFA0 1604 aa18.67■□□□□ 0.58
CHRNB1-203ENST00000570557 NBPF8Q3BBV2 869 aa18.67■□□□□ 0.58
CHRNB1-203ENST00000570557 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
CHRNB1-203ENST00000570557 ANKARQ7Z5J8 1434 aa18.65■□□□□ 0.58
CHRNB1-203ENST00000570557 KIF1AQ12756 1690 aa18.64■□□□□ 0.57
CHRNB1-203ENST00000570557 NUTM2FA1L443 756 aa18.64■□□□□ 0.57
CHRNB1-203ENST00000570557 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
CHRNB1-203ENST00000570557 GPRASP1Q5JY77 1395 aa18.64■□□□□ 0.57
CHRNB1-203ENST00000570557 PXDNQ92626 1479 aa18.64■□□□□ 0.57
CHRNB1-203ENST00000570557 WASLO00401 505 aaPredicted RBP18.63■□□□□ 0.57
CHRNB1-203ENST00000570557 SPATA31A6Q5VVP1 1343 aa18.63■□□□□ 0.57
CHRNB1-203ENST00000570557 MINK1Q8N4C8 1332 aaPredicted RBP18.63■□□□□ 0.57
CHRNB1-203ENST00000570557 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
CHRNB1-203ENST00000570557 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
CHRNB1-203ENST00000570557 CLSPNQ9HAW4 1339 aa18.62■□□□□ 0.57
CHRNB1-203ENST00000570557 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
CHRNB1-203ENST00000570557 LRP6O75581 1613 aa18.61■□□□□ 0.57
CHRNB1-203ENST00000570557 TULP4Q9NRJ4 1543 aa18.61■□□□□ 0.57
CHRNB1-203ENST00000570557 PNPLA6Q8IY17 1366 aa18.61■□□□□ 0.57
CHRNB1-203ENST00000570557 PRR36Q9H6K5 1346 aa18.61■□□□□ 0.57
CHRNB1-203ENST00000570557 FOXO3O43524 673 aa18.6■□□□□ 0.57
CHRNB1-203ENST00000570557 RGS17Q9UGC6 210 aaPredicted RBP18.6■□□□□ 0.57
CHRNB1-203ENST00000570557 EIF3AQ14152 1382 aaKnown RBP18.59■□□□□ 0.57
CHRNB1-203ENST00000570557 ILDR2Q71H61 639 aa18.59■□□□□ 0.57
CHRNB1-203ENST00000570557 PHF8Q9UPP1 1060 aa18.59■□□□□ 0.57
CHRNB1-203ENST00000570557 ROCK2O75116 1388 aaKnown RBP18.58■□□□□ 0.57
CHRNB1-203ENST00000570557 RALGAPBQ86X10 1494 aa18.58■□□□□ 0.56
CHRNB1-203ENST00000570557 COL22A1Q8NFW1 1626 aaPredicted RBP18.57■□□□□ 0.56
CHRNB1-203ENST00000570557 CENPJQ9HC77 1338 aaPredicted RBP18.57■□□□□ 0.56
CHRNB1-203ENST00000570557 ATP7BP35670 1465 aa18.57■□□□□ 0.56
CHRNB1-203ENST00000570557 QRICH2Q9H0J4 1663 aa18.56■□□□□ 0.56
CHRNB1-203ENST00000570557 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
CHRNB1-203ENST00000570557 SPATA31A3Q5VYP0 1347 aa18.53■□□□□ 0.56
CHRNB1-203ENST00000570557 XPCQ01831 940 aaPredicted RBP18.53■□□□□ 0.56
CHRNB1-203ENST00000570557 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
CHRNB1-203ENST00000570557 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
CHRNB1-203ENST00000570557 NUDT16Q96DE0 195 aaKnown RBP18.53■□□□□ 0.56
CHRNB1-203ENST00000570557 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
CHRNB1-203ENST00000570557 TOPAZ1Q8N9V7 1692 aa18.53■□□□□ 0.56
CHRNB1-203ENST00000570557 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
CHRNB1-203ENST00000570557 PMFBP1Q8TBY8 1022 aa18.51■□□□□ 0.55
CHRNB1-203ENST00000570557 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
CHRNB1-203ENST00000570557 TRPM3Q9HCF6 1732 aaPredicted RBP18.51■□□□□ 0.55
CHRNB1-203ENST00000570557 PSME1Q06323 249 aa18.49■□□□□ 0.55
CHRNB1-203ENST00000570557 CARD11Q9BXL7 1154 aa18.49■□□□□ 0.55
CHRNB1-203ENST00000570557 CCDC61Q9Y6R9 512 aa18.49■□□□□ 0.55
CHRNB1-203ENST00000570557 TNS3Q68CZ2 1445 aa18.49■□□□□ 0.55
CHRNB1-203ENST00000570557 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
CHRNB1-203ENST00000570557 SBNO2Q9Y2G9 1366 aa18.48■□□□□ 0.55
CHRNB1-203ENST00000570557 PLEKHG3A1L390 1219 aa18.48■□□□□ 0.55
CHRNB1-203ENST00000570557 NUTM2BA6NNL0 878 aaPredicted RBP18.48■□□□□ 0.55
CHRNB1-203ENST00000570557 NUTM2EB1AL46 878 aaPredicted RBP18.48■□□□□ 0.55
CHRNB1-203ENST00000570557 NUTM2AQ8IVF1 878 aaPredicted RBP18.48■□□□□ 0.55
CHRNB1-203ENST00000570557 POTEAQ6S8J7 498 aa18.47■□□□□ 0.55
CHRNB1-203ENST00000570557 ALS2Q96Q42 1657 aa18.47■□□□□ 0.55
CHRNB1-203ENST00000570557 CABP2Q9NPB3 220 aa18.45■□□□□ 0.54
CHRNB1-203ENST00000570557 MARF1Q9Y4F3 1742 aaKnown RBP18.44■□□□□ 0.54
CHRNB1-203ENST00000570557 MEX3CQ5U5Q3 659 aaKnown RBP18.44■□□□□ 0.54
CHRNB1-203ENST00000570557 EVC2Q86UK5 1308 aa18.44■□□□□ 0.54
CHRNB1-203ENST00000570557 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
CHRNB1-203ENST00000570557 NGDNQ8NEJ9 315 aaKnown RBP18.43■□□□□ 0.54
CHRNB1-203ENST00000570557 ACEP12821 1306 aa18.43■□□□□ 0.54
CHRNB1-203ENST00000570557 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
CHRNB1-203ENST00000570557 PPIP5K1Q6PFW1 1433 aa18.41■□□□□ 0.54
CHRNB1-203ENST00000570557 ABCA3Q99758 1704 aa18.41■□□□□ 0.54
CHRNB1-203ENST00000570557 ZNF772Q68DY9 489 aaPredicted RBP18.41■□□□□ 0.54
CHRNB1-203ENST00000570557 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
CHRNB1-203ENST00000570557 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
CHRNB1-203ENST00000570557 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
CHRNB1-203ENST00000570557 AFF2P51816 1311 aa18.4■□□□□ 0.54
CHRNB1-203ENST00000570557 CRYBG1Q9Y4K1 1723 aa18.4■□□□□ 0.54
CHRNB1-203ENST00000570557 C8orf37Q96NL8 207 aa18.39■□□□□ 0.53
CHRNB1-203ENST00000570557 TESK2Q96S53 571 aa18.39■□□□□ 0.53
CHRNB1-203ENST00000570557 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
CHRNB1-203ENST00000570557 SOCS7O14512 581 aa18.37■□□□□ 0.53
CHRNB1-203ENST00000570557 ST20-MTHFSA0A0A6YYL1 179 aa18.36■□□□□ 0.53
CHRNB1-203ENST00000570557 BRD4O60885 1362 aaPredicted RBP18.36■□□□□ 0.53
CHRNB1-203ENST00000570557 SSH2Q76I76 1423 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms