RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-238ENST00000570150 ROBO1Q9Y6N7 1651 aa25.77■■□□□ 1.72
PKD1-238ENST00000570150 CDC42BPGQ6DT37 1551 aa25.75■■□□□ 1.71
PKD1-238ENST00000570150 MST1RQ04912 1400 aa25.75■■□□□ 1.71
PKD1-238ENST00000570150 EIF3AQ14152 1382 aaKnown RBP25.75■■□□□ 1.71
PKD1-238ENST00000570150 TIMELESSQ9UNS1 1208 aa25.75■■□□□ 1.71
PKD1-238ENST00000570150 PRAM1Q96QH2 718 aa25.74■■□□□ 1.71
PKD1-238ENST00000570150 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
PKD1-238ENST00000570150 WAPLQ7Z5K2 1190 aa25.73■■□□□ 1.71
PKD1-238ENST00000570150 TRAK1Q9UPV9 953 aa25.72■■□□□ 1.71
PKD1-238ENST00000570150 NALCNQ8IZF0 1738 aa25.71■■□□□ 1.71
PKD1-238ENST00000570150 BRINP3Q76B58 766 aa25.71■■□□□ 1.71
PKD1-238ENST00000570150 C1orf167Q5SNV9 1468 aa25.7■■□□□ 1.7
PKD1-238ENST00000570150 AHDC1Q5TGY3 1603 aaPredicted RBP25.66■■□□□ 1.7
PKD1-238ENST00000570150 JCADQ9P266 1359 aa25.65■■□□□ 1.7
PKD1-238ENST00000570150 PLEKHH1Q9ULM0 1364 aa25.65■■□□□ 1.7
PKD1-238ENST00000570150 ROCK2O75116 1388 aaKnown RBP25.64■■□□□ 1.69
PKD1-238ENST00000570150 LRRC59Q96AG4 307 aaKnown RBP25.63■■□□□ 1.69
PKD1-238ENST00000570150 NPHP3Q7Z494 1330 aa25.63■■□□□ 1.69
PKD1-238ENST00000570150 ESCO1Q5FWF5 840 aa25.62■■□□□ 1.69
PKD1-238ENST00000570150 ANKARQ7Z5J8 1434 aa25.62■■□□□ 1.69
PKD1-238ENST00000570150 RGS17Q9UGC6 210 aaPredicted RBP25.61■■□□□ 1.69
PKD1-238ENST00000570150 ADGRB2O60241 1585 aa25.61■■□□□ 1.69
PKD1-238ENST00000570150 PHLPP1O60346 1717 aa25.6■■□□□ 1.69
PKD1-238ENST00000570150 SAFB2Q14151 953 aaKnown RBP eCLIP25.6■■□□□ 1.69
PKD1-238ENST00000570150 NBPF1Q3BBV0 1214 aa25.59■■□□□ 1.69
PKD1-238ENST00000570150 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
PKD1-238ENST00000570150 SPATA31A6Q5VVP1 1343 aa25.59■■□□□ 1.69
PKD1-238ENST00000570150 SLC24A1O60721 1099 aa25.58■■□□□ 1.69
PKD1-238ENST00000570150 CENPJQ9HC77 1338 aaPredicted RBP25.58■■□□□ 1.69
PKD1-238ENST00000570150 WASLO00401 505 aaPredicted RBP25.57■■□□□ 1.68
PKD1-238ENST00000570150 GPRASP1Q5JY77 1395 aa25.56■■□□□ 1.68
PKD1-238ENST00000570150 ORAI2Q96SN7 254 aa25.55■■□□□ 1.68
PKD1-238ENST00000570150 MINK1Q8N4C8 1332 aaPredicted RBP25.55■■□□□ 1.68
PKD1-238ENST00000570150 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
PKD1-238ENST00000570150 TRPM1Q7Z4N2 1603 aa25.53■■□□□ 1.68
PKD1-238ENST00000570150 FMN2Q9NZ56 1722 aa25.53■■□□□ 1.68
PKD1-238ENST00000570150 SOS2Q07890 1332 aaPredicted RBP25.53■■□□□ 1.68
PKD1-238ENST00000570150 PSME1Q06323 249 aa25.52■■□□□ 1.68
PKD1-238ENST00000570150 CARD11Q9BXL7 1154 aa25.52■■□□□ 1.68
PKD1-238ENST00000570150 PHF8Q9UPP1 1060 aa25.52■■□□□ 1.68
PKD1-238ENST00000570150 NHSL1Q5SYE7 1610 aa25.52■■□□□ 1.68
PKD1-238ENST00000570150 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.68
PKD1-238ENST00000570150 RALGAPBQ86X10 1494 aa25.51■■□□□ 1.67
PKD1-238ENST00000570150 KIF1AQ12756 1690 aa25.51■■□□□ 1.67
PKD1-238ENST00000570150 TULP4Q9NRJ4 1543 aa25.5■■□□□ 1.67
PKD1-238ENST00000570150 HIRIP3Q9BW71 556 aaPredicted RBP25.49■■□□□ 1.67
PKD1-238ENST00000570150 NUTM2FA1L443 756 aa25.48■■□□□ 1.67
PKD1-238ENST00000570150 FOXO3O43524 673 aa25.47■■□□□ 1.67
PKD1-238ENST00000570150 NBPF8Q3BBV2 869 aa25.47■■□□□ 1.67
PKD1-238ENST00000570150 EVC2Q86UK5 1308 aa25.46■■□□□ 1.67
PKD1-238ENST00000570150 POTEAQ6S8J7 498 aa25.46■■□□□ 1.67
PKD1-238ENST00000570150 CDK19Q9BWU1 502 aa25.45■■□□□ 1.66
PKD1-238ENST00000570150 CCDC61Q9Y6R9 512 aa25.45■■□□□ 1.66
PKD1-238ENST00000570150 SBNO2Q9Y2G9 1366 aa25.44■■□□□ 1.66
PKD1-238ENST00000570150 SHPRHQ149N8 1683 aa25.43■■□□□ 1.66
PKD1-238ENST00000570150 SRPK2P78362 688 aaKnown RBP25.42■■□□□ 1.66
PKD1-238ENST00000570150 DDX17Q92841 729 aaKnown RBP25.42■■□□□ 1.66
PKD1-238ENST00000570150 NUDT16Q96DE0 195 aaKnown RBP25.42■■□□□ 1.66
PKD1-238ENST00000570150 MEX3CQ5U5Q3 659 aaKnown RBP25.4■■□□□ 1.66
PKD1-238ENST00000570150 KRT28Q7Z3Y7 464 aa25.4■■□□□ 1.66
PKD1-238ENST00000570150 NGDNQ8NEJ9 315 aaKnown RBP25.4■■□□□ 1.66
PKD1-238ENST00000570150 SBNO1A3KN83 1393 aa25.4■■□□□ 1.66
PKD1-238ENST00000570150 LRP6O75581 1613 aa25.39■■□□□ 1.66
PKD1-238ENST00000570150 PNPLA6Q8IY17 1366 aa25.39■■□□□ 1.65
PKD1-238ENST00000570150 PXDNQ92626 1479 aa25.39■■□□□ 1.65
PKD1-238ENST00000570150 ARHGEF10O15013 1369 aa25.38■■□□□ 1.65
PKD1-238ENST00000570150 ATP7BP35670 1465 aa25.35■■□□□ 1.65
PKD1-238ENST00000570150 ITSN1Q15811 1721 aa25.35■■□□□ 1.65
PKD1-238ENST00000570150 BRD4O60885 1362 aaPredicted RBP25.35■■□□□ 1.65
PKD1-238ENST00000570150 PLEKHG3A1L390 1219 aa25.35■■□□□ 1.65
PKD1-238ENST00000570150 NUTM2BA6NNL0 878 aaPredicted RBP25.35■■□□□ 1.65
PKD1-238ENST00000570150 NUTM2EB1AL46 878 aaPredicted RBP25.35■■□□□ 1.65
PKD1-238ENST00000570150 NUTM2AQ8IVF1 878 aaPredicted RBP25.35■■□□□ 1.65
PKD1-238ENST00000570150 PUS7Q96PZ0 661 aaKnown RBP25.35■■□□□ 1.65
PKD1-238ENST00000570150 SPATA31A3Q5VYP0 1347 aa25.35■■□□□ 1.65
PKD1-238ENST00000570150 ATAD2Q6PL18 1390 aa25.34■■□□□ 1.65
PKD1-238ENST00000570150 QRICH2Q9H0J4 1663 aa25.34■■□□□ 1.65
PKD1-238ENST00000570150 PMFBP1Q8TBY8 1022 aa25.34■■□□□ 1.65
PKD1-238ENST00000570150 PRR36Q9H6K5 1346 aa25.34■■□□□ 1.65
PKD1-238ENST00000570150 TNS3Q68CZ2 1445 aa25.32■■□□□ 1.64
PKD1-238ENST00000570150 USP32Q8NFA0 1604 aa25.31■■□□□ 1.64
PKD1-238ENST00000570150 ZNF772Q68DY9 489 aaPredicted RBP25.31■■□□□ 1.64
PKD1-238ENST00000570150 POLR3AO14802 1390 aaPredicted RBP25.31■■□□□ 1.64
PKD1-238ENST00000570150 XPCQ01831 940 aaPredicted RBP25.29■■□□□ 1.64
PKD1-238ENST00000570150 COL22A1Q8NFW1 1626 aaPredicted RBP25.28■■□□□ 1.64
PKD1-238ENST00000570150 CDCA8Q53HL2 280 aa25.28■■□□□ 1.64
PKD1-238ENST00000570150 ZNF692Q9BU19 519 aaPredicted RBP25.28■■□□□ 1.64
PKD1-238ENST00000570150 CABP2Q9NPB3 220 aa25.28■■□□□ 1.64
PKD1-238ENST00000570150 PPIP5K1Q6PFW1 1433 aa25.28■■□□□ 1.64
PKD1-238ENST00000570150 HAP1P54257 671 aaPredicted RBP25.26■■□□□ 1.63
PKD1-238ENST00000570150 ACEP12821 1306 aa25.25■■□□□ 1.63
PKD1-238ENST00000570150 USP47Q96K76 1375 aa25.24■■□□□ 1.63
PKD1-238ENST00000570150 LMOD2Q6P5Q4 547 aa25.24■■□□□ 1.63
PKD1-238ENST00000570150 RGPD8O14715 1765 aaPredicted RBP25.23■■□□□ 1.63
PKD1-238ENST00000570150 NINLQ9Y2I6 1382 aa25.23■■□□□ 1.63
PKD1-238ENST00000570150 ST20-MTHFSA0A0A6YYL1 179 aa25.22■■□□□ 1.63
PKD1-238ENST00000570150 PAK3O75914 559 aaPredicted RBP25.22■■□□□ 1.63
PKD1-238ENST00000570150 TMF1P82094 1093 aa25.22■■□□□ 1.63
PKD1-238ENST00000570150 AFF2P51816 1311 aa25.21■■□□□ 1.63
PKD1-238ENST00000570150 TOPAZ1Q8N9V7 1692 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms