RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 C14orf37Q86TY3 774 aa13.86□□□□□ -0.19
HCCAT5-201ENST00000569990 KNDC1Q76NI1 1749 aa13.86□□□□□ -0.19
HCCAT5-201ENST00000569990 ADGRL3Q9HAR2 1447 aa13.85□□□□□ -0.19
HCCAT5-201ENST00000569990 PIP4K2BP78356 416 aa13.85□□□□□ -0.19
HCCAT5-201ENST00000569990 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
HCCAT5-201ENST00000569990 STK26Q9P289 416 aa13.85□□□□□ -0.19
HCCAT5-201ENST00000569990 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
HCCAT5-201ENST00000569990 DCCP43146 1447 aa13.84□□□□□ -0.19
HCCAT5-201ENST00000569990 NALCNQ8IZF0 1738 aa13.84□□□□□ -0.19
HCCAT5-201ENST00000569990 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
HCCAT5-201ENST00000569990 KIAA1210Q9ULL0 1709 aa13.82□□□□□ -0.2
HCCAT5-201ENST00000569990 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
HCCAT5-201ENST00000569990 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
HCCAT5-201ENST00000569990 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
HCCAT5-201ENST00000569990 DLC1Q96QB1 1528 aa13.81□□□□□ -0.2
HCCAT5-201ENST00000569990 ATF3P18847 181 aa13.81□□□□□ -0.2
HCCAT5-201ENST00000569990 WAPLQ7Z5K2 1190 aa13.81□□□□□ -0.2
HCCAT5-201ENST00000569990 CLSPNQ9HAW4 1339 aa13.81□□□□□ -0.2
HCCAT5-201ENST00000569990 TONSLQ96HA7 1378 aa13.81□□□□□ -0.2
HCCAT5-201ENST00000569990 PLEKHH1Q9ULM0 1364 aa13.81□□□□□ -0.2
HCCAT5-201ENST00000569990 ABCB7O75027 752 aa13.8□□□□□ -0.2
HCCAT5-201ENST00000569990 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
HCCAT5-201ENST00000569990 NBPF1Q3BBV0 1214 aa13.78□□□□□ -0.2
HCCAT5-201ENST00000569990 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
HCCAT5-201ENST00000569990 MST1RQ04912 1400 aa13.78□□□□□ -0.2
HCCAT5-201ENST00000569990 ROBO1Q9Y6N7 1651 aa13.78□□□□□ -0.2
HCCAT5-201ENST00000569990 CDC42BPGQ6DT37 1551 aa13.77□□□□□ -0.21
HCCAT5-201ENST00000569990 PRAM1Q96QH2 718 aa13.77□□□□□ -0.21
HCCAT5-201ENST00000569990 TRPM1Q7Z4N2 1603 aa13.76□□□□□ -0.21
HCCAT5-201ENST00000569990 HSPA1LP34931 641 aa13.76□□□□□ -0.21
HCCAT5-201ENST00000569990 NBPF8Q3BBV2 869 aa13.76□□□□□ -0.21
HCCAT5-201ENST00000569990 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
HCCAT5-201ENST00000569990 POGKQ9P215 609 aa13.75□□□□□ -0.21
HCCAT5-201ENST00000569990 ARHGEF28Q8N1W1 1705 aaKnown RBP13.74□□□□□ -0.21
HCCAT5-201ENST00000569990 SAFB2Q14151 953 aaKnown RBP eCLIP13.74□□□□□ -0.21
HCCAT5-201ENST00000569990 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
HCCAT5-201ENST00000569990 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
HCCAT5-201ENST00000569990 ROCK2O75116 1388 aaKnown RBP13.72□□□□□ -0.21
HCCAT5-201ENST00000569990 ADGRB2O60241 1585 aa13.72□□□□□ -0.21
HCCAT5-201ENST00000569990 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
HCCAT5-201ENST00000569990 RALGAPBQ86X10 1494 aa13.71□□□□□ -0.21
HCCAT5-201ENST00000569990 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
HCCAT5-201ENST00000569990 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
HCCAT5-201ENST00000569990 AHDC1Q5TGY3 1603 aaPredicted RBP13.7□□□□□ -0.22
HCCAT5-201ENST00000569990 MINK1Q8N4C8 1332 aaPredicted RBP13.69□□□□□ -0.22
HCCAT5-201ENST00000569990 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
HCCAT5-201ENST00000569990 ORAI2Q96SN7 254 aa13.69□□□□□ -0.22
HCCAT5-201ENST00000569990 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
HCCAT5-201ENST00000569990 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
HCCAT5-201ENST00000569990 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
HCCAT5-201ENST00000569990 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
HCCAT5-201ENST00000569990 COL16A1Q07092 1604 aaPredicted RBP13.67□□□□□ -0.22
HCCAT5-201ENST00000569990 NHSL1Q5SYE7 1610 aa13.67□□□□□ -0.22
HCCAT5-201ENST00000569990 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
HCCAT5-201ENST00000569990 ESCO1Q5FWF5 840 aa13.66□□□□□ -0.22
HCCAT5-201ENST00000569990 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
HCCAT5-201ENST00000569990 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
HCCAT5-201ENST00000569990 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
HCCAT5-201ENST00000569990 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
HCCAT5-201ENST00000569990 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
HCCAT5-201ENST00000569990 USP32Q8NFA0 1604 aa13.64□□□□□ -0.23
HCCAT5-201ENST00000569990 QRICH2Q9H0J4 1663 aa13.64□□□□□ -0.23
HCCAT5-201ENST00000569990 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
HCCAT5-201ENST00000569990 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
HCCAT5-201ENST00000569990 SOS2Q07890 1332 aaPredicted RBP13.62□□□□□ -0.23
HCCAT5-201ENST00000569990 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
HCCAT5-201ENST00000569990 ATP7BP35670 1465 aa13.61□□□□□ -0.23
HCCAT5-201ENST00000569990 JCADQ9P266 1359 aa13.61□□□□□ -0.23
HCCAT5-201ENST00000569990 RGPD8O14715 1765 aaPredicted RBP13.61□□□□□ -0.23
HCCAT5-201ENST00000569990 FOXO3O43524 673 aa13.61□□□□□ -0.23
HCCAT5-201ENST00000569990 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
HCCAT5-201ENST00000569990 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
HCCAT5-201ENST00000569990 PXDNQ92626 1479 aa13.6□□□□□ -0.23
HCCAT5-201ENST00000569990 SBNO2Q9Y2G9 1366 aa13.59□□□□□ -0.23
HCCAT5-201ENST00000569990 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
HCCAT5-201ENST00000569990 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
HCCAT5-201ENST00000569990 MED1Q15648 1581 aaPredicted RBP13.58□□□□□ -0.23
HCCAT5-201ENST00000569990 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
HCCAT5-201ENST00000569990 SHPRHQ149N8 1683 aa13.58□□□□□ -0.24
HCCAT5-201ENST00000569990 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
HCCAT5-201ENST00000569990 EVC2Q86UK5 1308 aa13.57□□□□□ -0.24
HCCAT5-201ENST00000569990 PNPLA6Q8IY17 1366 aa13.57□□□□□ -0.24
HCCAT5-201ENST00000569990 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
HCCAT5-201ENST00000569990 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
HCCAT5-201ENST00000569990 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
HCCAT5-201ENST00000569990 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
HCCAT5-201ENST00000569990 CCDC61Q9Y6R9 512 aa13.56□□□□□ -0.24
HCCAT5-201ENST00000569990 USP47Q96K76 1375 aa13.56□□□□□ -0.24
HCCAT5-201ENST00000569990 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
HCCAT5-201ENST00000569990 SPATA31A6Q5VVP1 1343 aa13.55□□□□□ -0.24
HCCAT5-201ENST00000569990 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
HCCAT5-201ENST00000569990 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
HCCAT5-201ENST00000569990 PSME1Q06323 249 aa13.53□□□□□ -0.24
HCCAT5-201ENST00000569990 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
HCCAT5-201ENST00000569990 TESK2Q96S53 571 aa13.53□□□□□ -0.24
HCCAT5-201ENST00000569990 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
HCCAT5-201ENST00000569990 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
HCCAT5-201ENST00000569990 PPIP5K1Q6PFW1 1433 aa13.53□□□□□ -0.24
HCCAT5-201ENST00000569990 LRP6O75581 1613 aa13.53□□□□□ -0.24
HCCAT5-201ENST00000569990 SBNO1A3KN83 1393 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms